annotate data-test/phylip @ 4:95a7626b95ed draft

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author dcorreia
date Mon, 02 May 2016 07:30:03 -0400
parents 9e083ac98a6d
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1
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1 7 1503
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2 Human ATGGCTTCTGGAATCCTGGTTAATGTAAAGGAGGAGGTGACCTGCCCCATCTGCCTGGAACTCCTGACACAACCCCTGAGCCTGGACTGCGGCCACAGCTTCTGCCAAGCATGCCTCACTGCAAACCACAAGAAGTCCGGAGAGAGTAGCTGCCCTGTGTGCCGGATCAGTTACCAGCCTGAGAACATACGGCCTAATCGGCATGTAGCCAACATAGTGGAGAAGCTCAGGGAGGTCAAGTTGAGCCCAGAGGGGCAGAAAGTTGATCATTGTGCACGCCATGGAGAGAAACTTCTACTCTTCTGTCAGGAGGACGGGAAGGTCATTTGCTGGCTTTGTGAGCGGTCTCAGGAGCACCGTGGTCACCACACGTTCCTCACAGAGGAGGTTGCCCGGGAGTACCAAGTGAAGCTCCAGGCAGCTCTGGAGATGCTGAGGCAGAAGCAGCAGGAAGCTGAAGAGCAAGTGAAGCTCCAGGCAGCTCTGGAGATGCTGAGGCAGAAGCAGCAGGAAGCTGAAGAGTTGGAAGCTGACATCAGAGAAGAGAAAGCTTCCTGGAAGACTCAAATACAGTATGACAAAACCAACGTCTTGGCAGATTTTGAGCAACTGAGAGACATCCTGGACTGGGAGGAGAGCAATGAGCTGCAAAACCTGGAGAAGGAGGAGGAAGACATTCTGAAAAGCCTTACGAACTCTGAAACTGAGATGGTGCAGCAGACCCAGTCCCTGAGAGAGCTCATCTCAGATCTGGAGCATCGGCTGCAGGGGTCAGTGATGGAGCTGCTTCAGGGTGTGGATGGCGTCATAAAAAGGACGGAGAACGTGACCTTGAAGAAGCCAGAAACTTTTCCAAAAAATCAAAGGAGAGTGTTTCGAGCTCCTGATCTGAAAGGAATGCTAGAAGTGTTTAGAGAGCTGACAGATGTCCGACGCTACTGGGTTGATGTGACAGTGGCTCCAAACAACATTTCATGTGCTGTCATTTCTGAAGATAAGAGACAAGTGAGCTCTCCGAAACCAAGATACCAGACATTTGTGAATTTCAATTATTGTACTGGCATCCTGGGCTCTCAAAGTATCACATCAGGGAAACATTACTGGGAGGTAGACGTGTCCAAGAAAACTGCTTGGATCCTGGGGGTATGTGCTGGCTTCCAACCTGATGCAATGTGTAATATTGAAAAAAATGAAAATTATCAACCTAAATACGGCTACTGGGTTATAGGGTTAGAGGAAGGAGTTAAATGTAGTGCTTTCCAGGATAGTTCCTTCCATACTCCTTCTGTTCCTTTCATTGTGCCCCTCTCTGTGATTATTTGTCCTGATCGTGTTGGAGTTTTCCTAGACTATGAGGCTTGCACTGTCTCATTCTTCAATATCACAAACCATGGATTTCTCATCTATAAGTTTTCTCACTGTTCTTTTTCTCAGCCTGTATTTCCATATTTAAATCCTAGAAAATGTGGAGTCCCCATGACTCTGTGCTCACCAAGCTCTTGA
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3 Chimp ATGGCTTCTGGAATCCTGGTTAATGTAAAGGAGGAGGTGACCTGCCCCATCTGCCTGGAACTCCTGACACAACCCCTGAGCCTGGACTGCGGCCACAGCTTCTGCCAAGCATGCCTCACTGCAAACCACAAGAAGTCCGGAGAGAGTAGCTGCCCTGTGTGCCGGATCAGTTACCAGCCTGAGAACATACGGCCTAATCGGCATGTAGCCAACATAGTGGAGAAGCTCAGGGAGGTCAAGTTGAGCCCAGAGGGGCAGAAAGTTGATCATTGTGCACACCATGGAGAGAAACTTCTACTCTTCTGTCAGGAGGACGGGAAGGTCATTTGCTGGCTTTGTGAGCGGTCTCAGGAGCACCGTGGTCACCACACGTTCCTCACAGAGGAGGTTGCCCGGGAGTACCAAGTGAAGCTCCAGGCAGCTCTGGAGATGCTGAGGCAGAAGCAGCAGGAAGCTGAAGAGCAAGTGAAGCTCCAGGCAGCTCTGGAGATGCTGAGGCAGAAGCAGCAGGAAGCTGAAGAGTTGGAAGCTGACATCAGAGAAGAGAAAGCTTCCTGGAAGACTCAAATACAGTATGACAAAACCAACGTCTTGGCAGATTTTGAGCAACTGAGAGACATCCTGGACTGGGAGGAGAGCAATGAGCTGCAAAACCTGGAGAAGGAGGAGGAAGACATTCTGAAAAGCCTTACGAAGTCTGAAACTGAGATGGTGCAGCAGACCCAGTCCGTGAGAGAGCTCATCTCAGATCTGGAGCGTCGGCTGCAGGGGTCAGTGATGGAGCTGCTTCAGGGTGTGGATGGCGTCATAAAAAGGATGGAGAACGTGACCTTGAAGAAGCCAGAAACTTTTCCAAAAAATCAAAGGAGAGTGTTTCGAGCTCCTGATCTGAAAGGAATGCTAGAAGTGTTTAGAGAGCTGACAGATGTCCGACGCTACTGGGTTGATGTGACAGTGGCTCCAAACAACATTTCATGTGCTGTCATTTCTGAAGATATGAGACAAGTGAGCTCTCCGAAACCAAGATATCAGACATTTATGAATTTCAATTATTGTACTGGCATCCTGGGCTCTCAAAGTATCACATCAGGGAAACATTACTGGGAGGTAGACGTGTCCAAGAAAAGTGCTTGGATCCTGGGGGTATGTGCTGGCTTCCAACCTGATGCAATGTGTAATATTGAAAAAAATGAAAATTATCAACCTAAATATGGCTACTGGGTTATAGGGTTAGAGGAAGGAGTTAAATGTAGTGCTTTCCAGGATGGTTCCTTCCATACTCCTTCTGCTCCTTTCATTGTGCCCCTCTCTGTGATTATTTGTCCTGATCGTGTTGGAGTTTTCCTAGACTATGAGGCTTGCACTGTCTCATTCTTCAATATCACAAACCATGGATCTCTCATCTATAAGTTTTCTCACTGTTCTTTTTCTCAGCCTGTATTTCCATATTTAAATCCTAGAAAATGTGGAGTCCCCATGACTCTGTGCTCACCAAGCTCTTGA
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4 Gorilla ATGGCTTCTGGAATCCTGGTTAATGTAAAGGAGGAGGTGACCTGCCCCATCTGCCTGGAACTCCTGACACAACCCCTGAGCCTGGACTGCGGCCACAGCTTCTGCCAAGCATGCCTCACTGCAAACCACAAGAAGTCCGGAGAGAGTAGCTGCCCTGTGTGCCGGATCAGTTACCAGCCTGAGAACATACGGCCTAATCGGCATGTAGCCAACATAGTGGAGAAGCTTAGGGAGGTCAAGTTGAGCCCAGAGGGGCAGAAAGTTGATCATTGTGCACGCCATGGAGAGAAACTTCTACTCTTCTGTCAGGAGGACGGGAAGGTCATTTGCTGGCTTTGCGAGCGGTCTCAGGAGCACCGTGGTCACCACACGTTCCTCACAGAGGAGGTTGCCCAGGAGTACCAAGTGAAGCTCCAGGCAGCTCTGGAGATGCTGAGGCAGAAGCAGCAGGAAGCTGAAGAGCAAGTGAAGCTCCAGGCAGCTCTGGAGATGCTGAGGCAGAAGCAGCAGGAAGCTGAAGAGTTGGAAGCTGACATCAGAGAAGAGAAAGCTTCCTGGAAGACTCAAATACAGTATGACAAAACCAACGTCTTGGCAGATTTTGAGCAACTGAGAGACATCCTGGACTGGGAGGAGAGCAATGAGCTGCAAAACCTGGAGAAGGAGGAGGAAGACATTCTGAAACGCCTTACGAAGTCTGAAACTGAGATGGTGCAGCAGACCCAGTCCGTGAGAGAGCTCATCTCAGATCTGGAGCATCGGCTGCAGGGGTCAGTGATGGAGCTGCTTCAGGGTGTGGATGGCGTCATAAAAAGGATGGAGAACGTGACCTTGAAGAAGCCAGAAACTTTTCCAAAAAATCGAAGGAGAGTGTTTCGAGCTCCTGATCTGAAAGGAATGCTAGAAGTGTTTAGAGAGCTGACAGATGTCCGACGCTACTGGGTTGATGTGACAGTGGCTCCAAACAACATTTCATGTGCTGTCATTTCTGAAGATATGAGACAAGTGAGCTCTCCGAAACCAAGATATCAGACATTTATGAATTTCAATTATTGTACGGGCATCCTGGGCTCTCAAAGTATCACATCAGGGAAACATTACTGGGAGGTAGACGTGTCCAAGAAAAGTGCTTGGATCCTGGGGGTATGTGCTGGCTTCCAACCTGATGCAACGTGTAATATTGAAAAAAATGAAAATTATCAACCTAAATATGGCTACTGGGTTATAGGGTTAGAGGAAGGAGTTAAATGCAGTGCTTTCCAGGATGGTTCCTTCCATACTCCTTCTGCTCCTTTCATTGTGCCCCTCTCTGTGATTATTTGTCCTGATCGTGTTGGAGTTTTCCTAGACTATGAGGCTTGCACTGTCTCATTCTTCAATATCACAAACCATGGATTTCTCATCTATAAGTTTTCTCACTGTTCTTTTTCTCAGCCTGTATTTCCATATTTAAATCCTAGAAAATGTAGAGTCCCCATGACTCTGTGCTCGCCAAGCTCTTGA
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5 Orangutan ATGGCTTCTGGAATCCTGGTTAATGTAAAGGAGGAGGTGACCTGCCCTATCTGCCTGGAACTCCTGACACAACCCCTGAGTCTGGACTGCGGCCACAGCTTCTGCCAAGCATGCCTCACTGCAAACCACAAGAAGTCCGGAGAGAGAAGCTGCCCTGTGTGCCGGGTCAGTTACCAGCCTAAGAACATACGGCCTAATCGGCATGTAGCCAACATAGTGGAGAAGCTCAGGGAGGTCAAATTGAGCCCAGAGGGGCAGAAGGTTGATCACTGTGCACGCCATGGAGAGAAACTTCTACTCTTCTGTAAGGAGGACGGGAAGGTCATTTGCTGGCTTTGTGAGCGGTCTCAGGAGCACCGTGGTCACCACACATTCCTCACGGAGGAGGTTGCCCAGAAGTACCAAGTGAAGCTCCAGGCAGCTCTGGAGATGCTGAGGCAGAAGCAGCAGGAAGCTGAAGAGCAAGTGAAGCTCCAGGCAGCTCTGGAGATGCTGAGGCAGAAGCAGCAGGAAGCTGAAGAGTTGGAAGCTGACATCAGAGAAGAGAAAGCTTCCTGGAAGACTCAAATACAGTATGACAAAACCAGCGTCTTGGCAGATTTTGAGCAACTGAGAGACATCCTGGACTGGGAGGAGAGCAATGAGCTGCAAAACCTGGAGAAGGAGGAGGAAGACATTCTAAAAAGCCTTACGAAGTCTGAAACTGAGATGGTGCAGCAGACCCAGTCCGTGAGAGAGCTCATCTCAGATGTGGAGCATCGGCTGCAGGGGTCAGTGATGGAGCTGCTTCAGGGTGTGGATGGCATCATAAAAAGGATGCAGAACGTGACCTTGAAGAAGCCAGAAACTTTTCCAAAAAATCAAAGGAGAGTGTTTCGAGCTCCTAATCTGAAAGGAATGCTAGAAGTGTTTAGAGAGCTGACAGATGTCCGACGCTACTGGGTTGATGTGACAGTGGCTCCAAACGACATTTCATATGCTGTCATTTCTGAAGATATGAGACAAGTGAGCTGTCCGGAACCAACATATCAGACATATGTGAATTTCAATTATTGTACTGGCATCCTGGGCTCTCAAAGTATCACGTCAGGGAAACATTACTGGGAGGTAGACGTGTCCAAGAAAAGTGCTTGGATCCTGGGGGTATGTGCTGGCTTCCAACCTGATGCAATGTATAATATTGAACAAAATGAAAATTATCAACCTCAATATGGCTACTGGGTTATAGGGTTAGAGGAAGGAGTTAAATGTAGTGCTTTCCAGGATGGTTCCTTCCATAATCCTTCTGCTCCTTTCATTGTGCCCCTCTCTGTGATTATTTGTCCTGATCGTGTTGGAGTTTTCCTAGACTATGAGGCTTGCACTGTCTCATTCTTCAATATCACAAACCATGGATTTCTCATCTATAAGTTTTCTCACTGTTCTTTTTCTCAGCCTGTATTTCCATATTTAAATCCTAGAAAATGTAGAGTCCCCATGACTCTGTGCTCACCAAGCTCTTGA
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6 Gibbon ATGGCTTCTGGAATCCTGGTTAATGTAAAGGAGAAGGTGACCTGCCCCATCTGCCTGGAACTCCTGACACAACCCCTGAGTCTGGACTGCGGCCACAGCTTCTGCCAAGCATGCCTCACTGCAAACCACAAAACGTCCGGAGAGAGAAGCTGCCCTGTGTGCCGGATCAGTTACCAGCATAAGAACATACGGCCTAATCGGCATGTAGCCAACATAGTGGAGAAGCTCAGGGAGGTCAAGTTGAGCCCAGAGGGGCAGAAGGTTGATCACTGTGCACGCCACGGAAAGAAACTTCTACTCTTCTGTCAGGAGGACAGGAAGGTCATTTGCTGGCTTTGTGAGCGGTCTCAGGAGCACCGTGGTCACCACACATTCCTCACGGAGGAGGTTGCCCAGGAGTACCAAATGAAGCTCCAGGCAGCTCTGCAGATGCTGAGGCAGAAGCAGCAGGAAGCTGAAGAGCAAATGAAGCTCCAGGCAGCTCTGCAGATGCTGAGGCAGAAGCAGCAGGAAGCTGAAGAGTTGGAAGCTGACATCAGAGAAGAGAAAGCTTCCTGGAAGACTCAAATACAGTATGACAAAACCAACATCTTGGCAGATTTTGAGCAACTGAGACACATCCTGGACTGGGTGGAGAGCAATGAGCTGCAAAACCTGGAGAAGGAGGAGAAAGACGTTCTGAAAAGGCTTATGAGGTCTGAAATTGAGATGGTGCAGCAGACCCAGTCCGTGAGAGAGCTCATCTCAGATCTGGAGCATCGGCTGCAGGGGTCAGTGATGGAGCTGCTTCAGGGTGTGGATGGCGTCATAAAAAGGATGAAGAACGTGACCTTGAAGAAGCCAGAAACTTTTCCAAAAAATCGAAGGAGAGTGTTTCGAGCTGCTGATCTGAAAGTAATGCTAGAAGTGTTGAGAGAGCTGAGAGATGTCCGACGCTACTGGGTTGATGTGACAGTGGCTCCAAACAACATTTCATATGCTGTCATTTCTGAAGATATGAGACAAGTGAGCTCTCCGGAACCAATATCTCAGACATTTGTGAATTTCAATTATTGTACTGGCATCCTGGGCTCTCAAAGTATCACATCAGGGAAACATTACTGGGAGGTAGACGTGTCCAAGAAAAGTGCTTGGATCCTGGGGGTATGTGCTGGCTTGCAACCTGATGCAATGTATAATATTGAACAAAATGAAAATTATCAACCTAAATATGGCTACTGGGTTATAGGGTTAGAGGAAGGAGTTAAATGTAATGCTTTCCAGGATGGTTCCATCCATACTCCTTCTGCTCCTTTCGTTGTGCCCCTCTCTGTGAATATTTGTCCTGATCGTGTTGGAGTTTTCCTAGACTATGAGGCTTGCACTGTCTCATTCTTCAATATCACAGACCATGGATTTCTCATCTATAAGTTTTCTCACTGTTCTTTTTCTCAGCCTGTATTTCCATATTTAAATCCTAGAAAATGTACAGTCCCCATGACTCTGTGCTCACCAAGCTCTTGA
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7 Rhes_cDNA ATGGCTTCTGGAATCCTGCTTAATGTAAAGGAGGAGGTGACCTGTCCCATCTGCCTGGAACTCCTGACAGAACCCCTGAGTCTGCACTGCGGCCACAGCTTCTGCCAAGCGTGCATCACTGCGAACCACAAGAAGTCCGAAGAGAGAAGCTGCCCTGTGTGCCGGATCAGTTACCAGCCTGAGAACATACAGCCTAATCGGCATGTAGCCAACATAGTGGAGAAGCTCAGGGAGGTCAAGTTGAGCCCAGAGGGACAGAAGGTTGATCACTGTGCACGCCATGGAGAGAAACTCCTACTCTTCTGTCAGGAGGACAGCAAGGTCATTTGCTGGCTTTGTGAGCGGTCTCAGGAGCACCGTGGTCACCACACTTTCCTCATGGAGGAGGTTGCCCAGGAGTACCATGTGAAGCTCCAGACAGCTCTGGAGATGCTGAGGCAGAAGCAGCAGGAAGCTGAAAAGCATGTGAAGCTCCAGACAGCTCTGGAGATGCTGAGGCAGAAGCAGCAGGAAGCTGAAAAGTTGGAAGCTGACATCAGAGAAGAGAAAGCTTCCTGGAAGATTCAAATAGACTACGACAAAACCAACGTCTCGGCAGATTTTGAGCAACTGAGAGAGATCCTGGACTGGGAGGAGAGCAATGAGCTGCAGAACCTGGAGAAGGAGGAAGAAGACATTCTGAAAAGCCTTACGAAGTCTGAAACGGAGATGGTGCAGCAGACCCAGTACATGAGAGAGCTCATCTCAGAACTGGAGCATCGGTTGCAGGGGTCAATGATGGATCTACTGCAGGGTGTGGATGGCATCATTAAAAGGATTGAGAACATGACCTTGAAGAAGCCAAAAACTTTTCACAAAAATCAAAGGAGAGTGTTTCGAGCTCCTGATCTGAAAGGAATGCTAGACATGTTTAGAGAGCTAACAGATGCCCGACGCTACTGGGTTGATGTGACACTGGCTACAAACAACATTTCGCATGCTGTCATTGCTGAAGATAAGAGACAAGTGAGCTCTCGGAACCCATTATTTACGTTTCTCACGAATTTCAATTATTGTACTGGCGTCCTGGGCTCCCAAAGTATCACATCAGGGAAGCATTACTGGGAGGTAGATGTGTCCAAGAAAAGTGCTTGGATCCTGGGGGTATGTGCTGGCTTCCAATCCGATGCAATGTATAATATTGAACAAAATGAAAATTATCAACCTAAATATGGCTACTGGGTTATAGGGTTACAGGAAGGAGTTAAATATAGTGTTTTCCAGGATGGTTCCTCACATACTCCTTTTGCTCCTTTCATTGTGCCCCTCTCTGTGATTATTTGTCCTGATCGTGTTGGAGTTTTCGTAGACTATGAGGCTTGCACTGTCTCATTCTTCAATATCACAAACCATGGATTTCTCATCTATAAGTTTTCTCAGTGTTCTTTTTCTAAGCCTGTATTTCCATATTTAAATCCCAGAAAATGTACAGTCCCCATGACTCTGTGCTCACCAAGCTCTTGA
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8 Baboon ATGGCTTCTGGAATCCTGCTTAATGTAAAGGAGGAGGTGACCTGTCCCATCTGCCTGGAACTCCTGACAGAACCCCTGAGTCTGCCCTGTGGCCACAGCTTCTGCCAAGCGTGCATCACTGCAAACCACAGGAAGTCCGAAGAGAGAAGCTGCCCTGTGTGCCGGATCAGTTACCAGCCTGAGAACATACAGCCTAATCGGCATGTAGCCAACATAGTGGAGAAGCTCAGGGAGGTCAAGTTGAGCCCAGAGGGGCTGAAGGTTGATCACTGTGCACGCCATGGAGAGAAACTCCTACTCTTCTGTCAGGAGGACAGCAAGGTCATTTGCTGGCTTTGTGAGCGGTCTCAGGAGCACCGTGGTCACCACACTTTCCTCATGGAGGAGGTTGCCCAGGAGTACCATGTGAAGCTCCAGACAGCTCTGGAGATGCTGAGGCAGAAGCAGCAGGAAGCTGAAAAGCATGTGAAGCTCCAGACAGCTCTGGAGATGCTGAGGCAGAAGCAGCAGGAAGCTGAAAAGTTGGAAGCTGACATCAGAGAAGAGAAAGCTTCCTGGAAGATTCAAATAGACTACGACAAAACCAACGTCTCGGCAGATTTTGAGCAACTGAGAGAGATCCTGGACTGGGAGGAGAGCAATGAGCTGCAGAACCTGGAGAAGGAGGAAGAAGACATTCTGAAAAGCCTTACGAAGTCTGAAACGGAGATGGTGCAGCAGACCCAGTACATGAGAGAGCTCATCTCAGATCTGGAGCATCGGTTGCAGGGGTCAATGATGGAGCTACTGCAGGGTGTGGATGGCATCATTAAAAGGATTGAGAACATGACCTTGAAGAAGCCAAAAACTTTTCACAAAAATCAAAGGAGAGTGTTTCGAGCTCCTGATCTGAAAGGAATGCTAGACATGTTTAGAGAGCTAACAGATGTCCGACGCTACTGGGTTGATGTGACACTGGCTCCAAACAACATTTCGCATGCTGTCATTGCTGAAGATAAGAGACAAGTGAGCTCTCGGAACCCATTATTTTCGTTTCTCACGAATTTCAATTATTGTACTGGCGTCCTGGGCTCCCAAAGTATCACATCAGGGAAGCATTACTGGGAGGTAGATGTGTCCAAGAAAAGTGCTTGGATCCTGGGGGTATGTGCTGGCTTCCAACCTGATGCAATGTATAATATTGAACAAAATGAAAATTATCAACCTAAATATGGCTACTGGGTTATAGGGTTACAGGAAGGAGTTAAATATAGTGTTTTCCAGGATGGTTCCTCACATACTCCTTTTGCTCCTTTCATTGTGCCCCTCTCTGTGATTATTTGTCCTGATCGTGTTGGAGTTTTCGTAGACTATGAGGCTTGCACTGTCTCATTCTTCAATATCACAAACCATGGATTTCTCATCTATAAGTTTTCTCAGTGTTCTTTTTCTAAGCCTGTATTTCCATATTTAAATCCCAGAAAATGTACAGTCCCCATGACTCTGTGCTCACCAAGCTCTTGA