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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="R" version="3.2.0">
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4 <repository changeset_revision="d973c8e9b29e" name="package_r_3_2_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
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5 </package>
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6
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7 <package name="limma" version="3.24.12">
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8 <install version="1.0">
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9 <actions>
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10 <action type="setup_r_environment">
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11 <repository changeset_revision="d973c8e9b29e" name="package_r_3_2_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
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12 <package name="R" version="3.2.0" />
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13 </repository>
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14 <package>https://bioarchive.galaxyproject.org/limma_3.25.3.tar.gz?raw=true</package>
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15 <package>http://bioconductor.org/packages/release/bioc/src/contrib/edgeR_3.10.2.tar.gz?raw=true</package>
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16 <package>https://cran.r-project.org/src/contrib/Rcpp_0.12.1.tar.gz?raw=true</package>
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17 </action>
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18 </actions>
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19
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20 </install>
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21 <readme>
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22 limma_3.24.12 installed now try edgeR
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23 </readme>
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24 </package>
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25
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26 </tool_dependency>
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