diff r_caret_test1-revision_toolshed/mayatoolV1.xml @ 0:39926de9e698 draft default tip

Uploaded

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/r_caret_test1-revision_toolshed/mayatoolV1.xml	Wed Jan 06 02:33:31 2016 -0500
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+<tool id="mayatoolsbase" name="mayatools" version="1.0.1">
+    <description>extract data from file according to field name and Ids </description>
+    <requirements>
+          <!--requirement type="set_environment">MAYATOOL_PATH</requirement-->
+         
+    </requirements>
+    <command interpreter="perl">mayachemtool/test.pl $outputsdf $inputsdf $Identifier $indexnumbers ;</command>
+    <inputs>
+        <param name="inputsdf" type="data" format="sdf" label="Main Data File" />
+        <param name="Identifier" type="text" label="Field name" help="Give field name of molecules on which compound need to be extracted Ex. MolID,PUBCHEM_COMPOUND_ID,CID etc." />
+        <param name="indexnumbers" type="data" format="txt" label="Id file which need to be extracted from dataset" />
+
+        <!--param name="max_olap" type="integer" value="50" label="Set maximum overlap length" help="Overlaps this short or shorter are ignored." /-->
+        </inputs>
+    <outputs>
+        <data name="outputsdf" type="data" label="${outputsdf}.sdf" />
+                  
+        </outputs>
+    <tests>
+        
+    </tests>
+  </tool>