annotate r_caret_test1-revision_toolshed/tool1V2.xml @ 0:39926de9e698 draft default tip

Uploaded
author deepakjadmin
date Wed, 06 Jan 2016 02:33:31 -0500
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
1 <tool id="aacaret001" name="Prepare input file for classification model">
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
2 <description>
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
3 This Tool Converts Input csv File into RData Which Is Further Used for Model Building
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
4 </description>
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
5 <!--command interpreter="bash">step1.sh $file1 $output1 </command-->
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
6 <requirements>
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
7 <requirement type="set_environment">R_ROOT_DIR</requirement>
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
8 <requirement type="package" version="3.2.0">R</requirement>
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
9 </requirements>
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
10 <command interpreter="Rscript">caret_future/tool1/csv2rdatatrain.R $file1 $RData </command>
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
11 <inputs>
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
12 <param format="csv" name="file1" type="data" label="Select file containing training data" help="CSV format" />
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
13 </inputs>
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
14 <outputs>
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
15 <data format="RData" name="RData" label="Input RData" />
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
16 </outputs>
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
17 <help>
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
18 .. class:: infomark
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
19
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
20 **Input "csv file" format must be as given below :**
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
21
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
22
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
23 "",feature1,feaure2,feature3,..,activity
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
24
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
25
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
26 cpd1,623,0.4,3.4,..,Active
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
27
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
28 cpd2,234,0.9,5.6,..,Inactive
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
29
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
30 cpd3,567,0.5,3.14,..,Active
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
31
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
32 cpd4,231,0.1,1.2,..,Inactive
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
33
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
34 here "cpd" stands for name or id of a compound. It is rowname with no column header.
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
35
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
36
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
37 </help>
39926de9e698 Uploaded
deepakjadmin
parents:
diff changeset
38 </tool>