Mercurial > repos > deepakjadmin > r_caret_test1
comparison tool3V2.xml @ 0:a4a2ad5a214e draft default tip
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author | deepakjadmin |
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date | Thu, 05 Nov 2015 02:37:56 -0500 |
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-1:000000000000 | 0:a4a2ad5a214e |
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1 <tool id="aacaret003" name="Predict Activity"> | |
2 <description> | |
3 used to predict activity based on given model | |
4 </description> | |
5 <!--command interpreter="bash">step3run.sh $file1 $model $output1 2>/dev/null </command--> | |
6 <requirements> | |
7 <requirement type="set_environment">R_ROOT_DIR</requirement> | |
8 <requirement type="package" version="3.2.0">R</requirement> | |
9 <requirement type="package" version="1.0.0">caret-tools</requirement> | |
10 </requirements> | |
11 <command interpreter="Rscript">caret_future/tool2/Preold_advance.R $file1 $model $output1 2>/dev/null </command> | |
12 | |
13 <inputs> | |
14 <param name="model" format="RData" type="data" label="Select Model" /> | |
15 <param name="file1" format="csv" type="data" label="Select file have descriptor data for activity prediction" help="csv format" /> | |
16 </inputs> | |
17 <outputs> | |
18 <data format="txt" name="output1" label="Prediction on $file1.name" /> | |
19 </outputs> | |
20 <help> | |
21 | |
22 .. class:: infomark | |
23 | |
24 Make sure this file **must** contain **all** or **more features** than **input** "csv file" used for **model building** | |
25 | |
26 ---------- | |
27 | |
28 **Input "csv file" must be as follows** | |
29 | |
30 ---------- | |
31 | |
32 | |
33 Example file:- | |
34 | |
35 | |
36 | |
37 # example.csv | |
38 | |
39 feature1,feature2,feature3,..,featureN | |
40 | |
41 ro1 234,2.3,34,7,..,0.9 | |
42 | |
43 ro2 432,3.4,23.1,12,..,0.12 | |
44 | |
45 ro3 692,23,12.2,19,..,0.14 | |
46 | |
47 | |
48 ----------- | |
49 | |
50 **MODEL** | |
51 | |
52 Choose model file received from model building step. | |
53 | |
54 Model file has "data" file format can be seen by | |
55 | |
56 clicking on output files shown in history . | |
57 | |
58 | |
59 </help> | |
60 </tool> |