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comparison caret_future/tool2/tool2.xml.1 @ 0:68300206e90d draft default tip

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date Thu, 05 Nov 2015 02:41:30 -0500
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1 <tool id="cddddxpsssp2" name="Create script from the template file ">
2 <description>
3 used to create script file from user given input to build a model
4 </description>
5 <command interpreter="python">modelBuilding.py --method $METHOD $RDATA --getdatainfoeval $OPTION11.GETDATAINFOEVAL --getdatainfoecho $OPTION11.GETDATAINFOECHO --getdatainforesult $OPTION11.GETDATAINFORESULT --missingfiltereval $OPTION11.MISSINGFILTEREVAL --missingfilterecho $OPTION11.MISSINGFILTERECHO --missingfilterresult $OPTION11.MISSINGFILTERRESULT --missingfilterthreshc $OPTION11.MISSINGFILTERTHRESHC --missingfilterthreshr $OPTION11.MISSINGFILTERTHRESHR --pcaeval $OPTION11.PCAEVAL --pcaecho $OPTION11.PCAECHO --pcaresult $OPTION11.PCARESULT --pcacomp $OPTION11.PCACOMP --pcaploteval $OPTION11.PCAPLOTEVAL --pcaplotecho $OPTION11.PCAPLOTECHO --pcaplotresult $OPTION11.PCAPLOTRESULT --pcaplotfig $OPTION11.PCAPLOTFIG --initialdataspliteval $OPTION11.INITIALDATASPLITEVAL --initialdatasplitecho $OPTION11.INITIALDATASPLITECHO --initialdatasplitresult $OPTION11.INITIALDATASPLITRESULT --saampling $OPTION11.SAAMPLING --percent $OPTION11.PERCENT --nzveval $OPTION11.NZVEVAL --nzvresult $OPTION11.NZVRESULT --nzvecho $OPTION11.NZVECHO --corrfiltereval $OPTION11.CORRFILTEREVAL --corrfilterresult $OPTION11.CORRFILTERRESULT --corrfilterecho $OPTION11.CORRFILTERECHO --threshholdcor $OPTION11.THRESHHOLDCOR --preproceval $OPTION11.PREPROCEVAL --preprocecho $OPTION11.PREPROCECHO --preprocresult $OPTION11.PREPROCRESULT --setupworkersecho $OPTION11.SETUPWORKERSECHO --setupworkersresult $OPTION11.SETUPWORKERSRESULT --numworkers $OPTION11.NUMWORKERS --setupresamplingecho $OPTION11.SETUPRESAMPLINGECHO --setupresamplingresult $OPTION11.SETUPRESAMPLINGRESULT --resamplenumber $OPTION11.RESAMPLENUMBER --resamplenumberpercent $OPTION11.RESAMPLENUMBERPERCENT --setupgridresult $OPTION11.SETUPGRIDRESULT --setupgridecho $OPTION11.SETUPGRIDECHO --setupgridsize $OPTION11.SETUPGRIDSIZE --fitmodelresult $OPTION11.FITMODELRESULT --fitmodelecho $OPTION11.FITMODELECHO --fitmodeleval $OPTION11.FITMODELEVAL --modeldescrecho $OPTION11.MODELDESCRECHO --modeldescrresult $OPTION11.MODELDESCRRESULT --resamptableecho $OPTION11.RESAMPTABLEECHO --resamptableresult $OPTION11.RESAMPTABLERESULT --profileplotecho $OPTION11.PROFILEPLOTECHO --profileplotfig $OPTION11.PROFILEPLOTFIG --stopworkersecho $OPTION11.STOPWORKERSECHO --stopworkersresult $OPTION11.STOPWORKERSRESULT --testpredresult $OPTION11.TESTPREDRESULT --testpredecho $OPTION11.TESTPREDECHO --classprobstexresult $OPTION11.CLASSPROBSTEXRESULT --classprobstexecho $OPTION11.CLASSPROBSTEXECHO --classprobstexresult1 $OPTION11.CLASSPROBSTEXRESULT1 --classprobstexecho1 $OPTION11.CLASSPROBSTEXECHO1 --savedataecho $OPTION11.SAVEDATAECHO --savedataresult $OPTION11.SAVEDATARESULT --outputmodel $model --outputresultpdf $document </command>
6 <inputs>
7 <param name="METHOD" type="select" label="Select Method to Train Data" >
8 <option value="pls">Partial Least Square</option>
9 <option value="bagFDA">bag-Fourier Discriminant Analysis</option>
10 <option value="blackboost">black-boost- Boosting Method</option>
11 <option value="earth">Earth-MARS based method</option>
12 <option value="rf">Random Forest</option>
13 <option value="RRF">RRFglobal -Variant of Random Forest</option>
14 <option value="svmRadial">SVM-Radial</option>
15 <option value="svmPoly">SVM-Polynomial</option>
16 <option value="ada">ada-boost</option>
17 <option value="glm">Generalised linear model </option>
18 <option value="treebag">tree based bagging method</option>
19 <option value="nb">Naive Bayes</option>
20 <option value="knn">K-nearest neighbour</option>
21 </param>
22 <param name="RDATA" format="RData" type="data" label="Select File Containing Training Data" help="RData format" />
23
24
25 <conditional name="OPTION11">
26 <param name="PARAMAETERS" type="select">
27 <option value="basic" selected="TRUE" >Hide Advance Options </option>
28 <option value="Advance">Show Advance Options</option>
29 </param>
30
31 <when value="basic">
32
33 <param name="GETDATAINFOEVAL" type="hidden" value="TRUE" help="set TRUE if wish to evaluate. default is TRUE" />
34
35 <param name="GETDATAINFOECHO" type="hidden" value="FALSE" help="set True if wish to print. default is False"/>
36 <param name="GETDATAINFORESULT" type="hidden" value="hide" help="Set tex if wish to write in output pdf file. default is hide"/>
37
38 <param name="MISSINGFILTEREVAL" type="hidden" value= "TRUE" help="set TRUE if wish to evaluate. default is TRUE"/>
39
40 <param name="MISSINGFILTERECHO" type="hidden" value="FALSE" help="set True if wish to print .default is False"/>
41
42 <param name="MISSINGFILTERRESULT" type="hidden" value="tex" help="Set tex if wish to write in output pdf file. default is tex"/>
43
44 <param name="MISSINGFILTERTHRESHC" type="hidden" value="0.2" help="For column wise default is 0.2"/>
45
46 <param name="MISSINGFILTERTHRESHR" type="hidden" value="0.2" help="For row wise default is 0.2"/>
47
48 <param name="PCAEVAL" type="hidden" value="TRUE" help="set TRUE if wish to evaluate. default is TRUE"/>
49
50 <param name="PCAECHO" type="hidden" value="FALSE" help="set True if wish to print. default is False"/>
51
52 <param name="PCARESULT" type="hidden" value="tex" help="Set tex if wish to write in output pdf file. default is tex"/>
53
54 <param name="PCACOMP" type="hidden" value="3" help="set according to need. Default is 3"/>
55
56 <param name="PCAPLOTEVAL" type="hidden" value="TRUE" help="set TRUE if wish to plot PCA. default is TRUE"/>
57
58 <param name="PCAPLOTECHO" type="hidden" value="FALSE" help="Set True if wish to Print .default is False"/>
59
60 <param name="PCAPLOTRESULT" type="hidden" value="tex" help="Set tex if wish to write in output pdf file. default is tex"/>
61
62 <param name="PCAPLOTFIG" type="hidden" value="TRUE" help="set TRUE if wish to evaluate. default is TRUE"/>
63
64 <param name="INITIALDATASPLITEVAL" type="hidden" value= "TRUE" help="set TRUE for splitting in test and train set.default is True"/>
65
66 <param name="INITIALDATASPLITECHO" type="hidden" value="FALSE" help="set True if wish to print .default is False"/>
67
68 <param name="SAAMPLING" type="hidden" value="garBage" help="default is with No sampling"/>
69
70 <param name="INITIALDATASPLITRESULT" type="hidden" value="tex" help="Set tex if wish to write in output pdf file. default is tex"/>
71
72 <param name="PERCENT" type="hidden" value="0.8" help="default is 0.8"/>
73
74 <param name="NZVEVAL" type="hidden" value="TRUE" help="set TRUE if wish to evaluate. default is TRUE"/>
75
76 <param name="NZVRESULT" type="hidden" value="tex" help="Set tex if wish to write in output pdf file. default is tex"/>
77
78 <param name="NZVECHO" type="hidden" value="FALSE" label="Write Code in Document" help="set True if wish to print .default is False"/>
79
80 <param name="CORRFILTEREVAL" type="hidden" value="TRUE" help="set TRUE if wish to evaluate. default is TRUE"/>
81
82 <param name="CORRFILTERRESULT" type="hidden" value="tex" help="Set tex if wish to write in output pdf file. default is tex"/>
83
84 <param name="CORRFILTERECHO" type="hidden" value="FALSE" help="set True if wish to print .default is False"/>
85
86 <param name="THRESHHOLDCOR" type="hidden" value="0.75" help="set according to need .default is 0.75"/>
87
88 <param name="PREPROCEVAL" type="hidden" value="TRUE" help="set TRUE if wish to evaluate. default is TRUE"/>
89
90 <param name="PREPROCECHO" type="hidden" value="FALSE" help="set True if wish to print .default is False"/>
91
92 <param name="PREPROCRESULT" type="hidden" value="tex" help="Set tex if wish to write in output pdf file. default is tex"/>
93
94 <param name="SETUPWORKERSEVAL" type="hidden" value="FALSE" help="set TRUE if wish to evaluate. default is False"/>
95
96 <param name="SETUPWORKERSECHO" type="hidden" value="FALSE" label="Write Code in Document" help="set True if wish to print .default is False"/>
97
98 <param name="SETUPWORKERSRESULT" type="hidden" value="tex" help="Set tex if wish to write in output pdf file. default is tex"/>
99
100 <param name="NUMWORKERS" type="hidden" value="1" help ="default is 1"/>
101
102 <param name="SETUPRESAMPLINGECHO" type="hidden" value="FALSE" help="set True if wish to print .default is False"/>
103
104 <param name="SETUPRESAMPLINGRESULT" type="hidden" value="hide" help="Set tex if wish to write in output pdf file. default is hide"/>
105
106 <param name="RESAMPLENUMBER" type="hidden" value="10" label="Set Number of Times to Resample" help="default is 10"/>
107
108 <param name="RESAMPLENUMBERPERCENT" type="hidden" value="0.75" help="default is 0.75"/>
109
110 <param name="SETUPGRIDRESULT" type="hidden" value="hide" help="Set tex if wish to write in output pdf file. default is hide"/>
111
112 <param name="SETUPGRIDECHO" type="hidden" value="FALSE" help="set True if wish to print .default is False"/>
113
114 <param name="SETUPGRIDSIZE" type="hidden" value="3" help="default is 3 "/>
115
116 <param name="FITMODELEVAL" type="hidden" value="TRUE" help="set TRUE if wish to evaluate. default is TRUE"/>
117
118 <param name="FITMODELRESULT" type="hidden" value="tex" help="Set tex if wish to write in output pdf file. default is tex"/>
119
120 <param name="FITMODELECHO" type="hidden" value="FALSE" help="set True if wish to print .default is False"/>
121
122 <param name="MODELDESCRECHO" type="hidden" value="FALSE" help="set True if wish to print .default is False"/>
123
124 <param name="MODELDESCRRESULT" type="hidden" value="tex" help="Set tex if wish to write in output pdf file. default is tex"/>
125
126 <param name="RESAMPTABLEECHO" type="hidden" value="FALSE" help="set True if wish to print .default is False"/>
127
128 <param name="RESAMPTABLERESULT" type="hidden" value="tex" help="Set tex if wish to write in output pdf file. default is tex"/>
129
130 <param name="PROFILEPLOTECHO" type="hidden" value="FALSE" help="set True if wish to print .default is False"/>
131
132 <param name="PROFILEPLOTFIG" type="hidden" value="TRUE" help="set TRUE if wish to evaluate. default is TRUE"/>
133
134 <param name="STOPWORKERSECHO" type="hidden" value="FALSE" help="set True if wish to print .default is False"/>
135
136 <param name="STOPWORKERSRESULT" type="hidden" value= "hide" help="Set tex if wish to write in output pdf file. default is hide"/>
137
138 <param name="TESTPREDRESULT" type="hidden" value= "tex" help="Set tex if wish to write in output pdf file. default is tex"/>
139
140 <param name="TESTPREDECHO" type="hidden" value="FALSE" help="set True if wish to print. default is False"/>
141
142 <param name="CLASSPROBSTEXRESULT" type="hidden" value="tex" help="Set tex if wish to write in output pdf file. default is tex"/>
143
144 <param name="CLASSPROBSTEXECHO" type="hidden" value="FALSE" help="set True if wish to print .default is False" />
145
146 <param name="CLASSPROBSTEXRESULT1" type="hidden" value="hide" help="Set tex if wish to write in output pdf file. default is hide"/>
147
148 <param name="CLASSPROBSTEXECHO1" type="hidden" value="FALSE" help="set True if wish to print .default is False" />
149
150 <param name="SAVEDATAECHO" type="hidden" value="FALSE" help="set True if wish to print .default is False"/>
151
152 <param name="SAVEDATARESULT" type="hidden" value="tex" help="Set tex if wish to write in output pdf file. default is tex"/>
153
154 </when>
155
156
157
158
159
160 <when value="Advance">
161 <param name="GETDATAINFOEVAL" type="hidden" value="TRUE" help="set TRUE if wish to evaluate. default is TRUE" />
162 <param name="GETDATAINFOECHO" type="hidden" value="FALSE" help="set True if wish to print. default is False"/>
163 <param name="GETDATAINFORESULT" type="hidden" value="tex" help="Set tex if wish to write in output pdf file. default is tex"/>
164
165 <conditional name="CON1">
166 <param name="PARAMAETERS1" type="select" label="Remove Missing Values">
167 <option value="YES">YES </option>
168 <option value="NO" selected="true">NO </option>
169 </param>
170
171 <when value="YES">
172 <param name="MISSINGFILTEREVAL" type="hidden" value= "TRUE" help="set TRUE if wish to evaluate. default is TRUE"/>
173 <param name="MISSINGFILTERECHO" type="select" label="Write Code in Document" help="set True if wish to print .default is False" >
174 <option value="FALSE" selected="true">false</option>
175 <option value="TRUE">true</option>
176 </param>
177 <param name="MISSINGFILTERRESULT" type="select" label="Write Result in document" help="Set tex if wish to write in output pdf file. default is tex">
178 <option value="hide">hide-result will not written in file</option>
179 <option value="tex" selected="true">tex-result will written in file</option>
180 </param>
181 <param name="MISSINGFILTERTHRESHC" type="select" label="Set Cutoff Value for Missing Data value Columwise" help="For column wise default is 0.1 means column which has missing value more than 10% will be removed ">
182 <option value="0.1">0.1</option>
183 <option value="0.2">0.2</option>
184 <option value="0.25">0.25</option>
185 <option value="0.3">0.3</option>
186 <option value="0.35">0.35</option>
187 <option value="0.4">0.4</option>
188 <option value="0.45">0.45</option>
189 <option value="0.5">0.5</option>
190 <option value="0.55">0.55</option>
191 <option value="0.6">0.6</option>
192 <option value="0.65">0.65</option>
193 <option value="0.7">0.7</option>
194 <option value="0.75">0.75</option>
195 <option value="0.8">0.8</option>
196 </param>
197 <param name="MISSINGFILTERTHRESHR" type="select" label="Set Cutoff Value for Missing Data Value Rowwise " help="For row wise default is 0.1 means row having more than 10% missing values will be removed">
198 <option value="0.1">0.1</option>
199 <option value="0.2">0.2</option>
200 <option value="0.25">0.25</option>
201 <option value="0.3">0.3</option>
202 <option value="0.35">0.35</option>
203 <option value="0.4">0.4</option>
204 <option value="0.45">0.45</option>
205 <option value="0.5">0.5</option>
206 <option value="0.55">0.55</option>
207 <option value="0.6">0.6</option>
208 <option value="0.65">0.65</option>
209 <option value="0.7">0.7</option>
210 <option value="0.75">0.75</option>
211 <option value="0.8">0.8</option>
212 </param>
213 </when>
214 <when value="NO">
215 <param name="MISSINGFILTEREVAL" type="hidden" value= "FALSE" help="set TRUE if wish to evaluate. default is FALSE"/>
216
217 <param name="MISSINGFILTERECHO" type="hidden" value="FALSE" help="set True if wish to print .default is False"/>
218
219 <param name="MISSINGFILTERRESULT" type="hidden" value="hide" help="Set tex if wish to write in output pdf file. default is hide"/>
220
221 <param name="MISSINGFILTERTHRESHC" type="hidden" value="0" />
222
223 <param name="MISSINGFILTERTHRESHR" type="hidden" value="0" />
224
225 </when>
226 </conditional>
227
228 <!--param name="PCAEVAL" type="select" value="TRUE" label ="Principle Component Analysis of Data" help="set TRUE if wish to evaluate. default is TRUE">
229 <option value="TRUE" selected="true">true</option>
230 <option value="FALSE">False</option>
231 </param>
232 <param name="PCAECHO" type="select" label="Write Code in Document" help="set True if wish to print. default is False">
233 <option value="FALSE">false</option>
234 <option value="TRUE">true</option>
235 </param>
236 <param name="PCARESULT" type="select" value="tex" label="Write Result" help="Set tex if wish to write in output pdf file. default is tex">
237
238 <option value="tex" selected="true">tex-result will written in file</option>
239 <option value="hide">hide-result will not written in file</option>
240 </param>
241 <param name="PCACOMP" type="select" label="Number of PCA Component" help="set according to need. Default is 3">
242 <option value="3">3</option>
243 <option value="4">4</option>
244 <option value="5">5</option>
245 <option value="6">6</option>
246 <option value="7">7</option>
247 <option value="8">8</option>
248 <option value="9">9</option>
249 <option value="10">10</option>
250 </param>
251 <param name="PCAPLOTEVAL" type="select" value="TRUE" label="PCA Plotting" help="set TRUE if wish to plot PCA . default is TRUE">
252
253 <option value="TRUE" selected="true">True</option>
254 <option value="FALSE">False</option>
255 </param>
256 <param name="PCAPLOTECHO" type="select" label="Write Code in Document" help="Set True if wish to Print .default is False">
257 <option value="FALSE">false</option>
258 <option value="TRUE">true</option>
259 </param>
260 <param name="PCAPLOTRESULT" type="select" value="tex" label="Write Result" help="Set tex if wish to write in output pdf file. default is tex">
261
262 <option value="tex" selected="true">tex-result will written in file</option>
263 <option value="hide">hide-result will not written in file</option>
264 </param>
265 <param name="PCAPLOTFIG" type="select" label="Figure of PCA Plot" help="set TRUE if wish to evaluate. default is TRUE">
266 <option value="TRUE" selected="true">True</option>
267 <option value="FALSE">False</option>
268 </param>
269 <param name="INITIALDATASPLITEVAL" type="select" value="TRUE" label="Split The Data in Train And Test Set" help="set TRUE for splitting in test and train set.default is True">
270 <option value="TRUE" selected="true">True</option>
271 <option value="FALSE">False</option>
272 </param>
273 <param name="INITIALDATASPLITECHO" type="select" label="Write Code in Document" help="set True if wish to print .default is False" >
274 <option value="FALSE">false</option>
275 <option value="TRUE">true</option>
276 </param>
277
278 <param name="SAAMPLING" type="select" label="Select Sampling Method" help="Defult is with No sampling. you may choose downsample or upsample" >
279 <option value="garBage" selected="true">No Sampling</option>
280 <option value="downsampling">downsample</option>
281 <option value="upsampling">upsample</option>
282 </param>
283
284
285 <param name="INITIALDATASPLITRESULT" type="select" value="tex" label="Write Result" help="Set tex if wish to write in output pdf file. default is tex">
286
287 <option value="tex" selected="true">tex-result will written in file</option>
288 <option value="hide">hide-result will not written in file</option>
289 </param>
290 <param name="PERCENT" type="select" label="Set Value at Which Data Will be Splitted in Train and Test Set" help="default is 0.8">
291 <option value="0.8">0.8</option>
292 <option value="0.75">0.75</option>
293 <option value="0.6">0.6</option>
294 <option value="0.5">0.5</option>
295 </param>
296 <param name="NZVEVAL" type="select" label="Remove Near Zero Value" help="set TRUE if wish to evaluate. default is TRUE">
297 <option value="FALSE">False</option>
298 <option value="TRUE" selected="true">True</option>
299 </param>
300 <param name="NZVRESULT" type="select" label="Write Result" help="Set tex if wish to write in output pdf file. default is tex">
301 <option value="hide">hide-result will not written in file</option>
302 <option value="tex" selected="true">tex-result will written in file</option>
303 </param>
304 <param name="NZVECHO" type="select" label="Write Code in Document" help="set True if wish to print .default is False">
305 <option value="FALSE">false</option>
306 <option value="TRUE">true</option>
307 </param>
308 <param name="CORRFILTEREVAL" type="select" value="TRUE" label="Remove Highly Correlated Values" help="set TRUE if wish to evaluate. default is TRUE">
309 <option value="FALSE">False</option>
310 <option value="TRUE" selected="true">True</option>
311 </param>
312 <param name="CORRFILTERRESULT" type="select" label="Write Result" help="Set tex if wish to write in output pdf file. default is tex">
313 <option value="hide">hide-result will not written in file</option>
314 <option value="tex" selected="true">tex-result will written in file</option>
315 </param>
316 <param name="CORRFILTERECHO" type="select" label="Write Code in Document" help="set True if wish to print .default is False" >
317 <option value="FALSE">false</option>
318 <option value="TRUE">true</option>
319 </param>
320 <param name="THRESHHOLDCOR" type="select" label="Thresh hold Value for Correlated Value " help="set according to need .default is 0.75">
321 <option value="0.75">0.75</option>
322 <option value="0.4">0.4</option>
323 <option value="0.45">0.45</option>
324 <option value="0.5">0.5</option>
325 <option value="0.55">0.55</option>
326 <option value="0.6">0.6</option>
327 <option value="0.65">0.65</option>
328 <option value="0.7">0.7</option>
329 <option value="0.8">0.8</option>
330 <option value="0.85">0.85</option>
331 <option value="0.9">0.9</option>
332 <option value="0.95">0.95</option>
333 </param>
334 <param name="PREPROCEVAL" type="select" value="TRUE" label="Preprocessing of Data" help="set TRUE if wish to evaluate. default is TRUE">
335 <option value="FALSE">False</option>
336 <option value="TRUE" selected="true">True</option>
337 </param>
338 <param name="PREPROCECHO" type="select" label="Write Code in Document" help="set True if wish to print .default is False" >
339 <option value="FALSE">false</option>
340 <option value="TRUE">true</option>
341 </param>
342 <param name="PREPROCRESULT" type="select" label="Write Result" help="Set tex if wish to write in output pdf file. default is tex">
343 <option value="hide">hide-result will not written in file</option>
344 <option value="tex" selected="true">tex-result will written in file</option>
345 </param>
346 <param name="SETUPWORKERSEVAL" type="select" label="Use Available Processors" help="set TRUE if wish to evaluate. default is False">
347 <option value="FALSE">False</option>
348 <option value="TRUE">True</option>
349 </param>
350 <param name="SETUPWORKERSECHO" type="select" label="Write Code in Document" help="set True if wish to print .default is False" >
351 <option value="FALSE">false</option>
352 <option value="TRUE">true</option>
353 </param>
354 <param name="SETUPWORKERSRESULT" type="select" label="Write Result" help="Set tex if wish to write in output pdf file. default is tex">
355 <option value="tex">tex-result will written in file</option>
356 <option value="hide">hide-result will not written in file</option>
357 </param>
358 <param name="NUMWORKERS" type="select" label="Set Number of Processors" help ="default is 1">
359 <option value="1">1</option>
360 <option value="2">2</option>
361 <option value="4">4</option>
362 <option value="6">6</option>
363 <option value="8">8</option>
364 <option value="16">16</option>
365 <option value="24">24</option>
366 <option value="32">32</option>
367 <option value="40">40</option>
368 <option value="48">48</option>
369 <option value="64">64</option>
370 </param>
371 <param name="SETUPRESAMPLINGECHO" type="select" label="Print Set Resampling" help="set True if wish to print .default is False">
372 <option value="FALSE">false</option>
373 <option value="TRUE">true</option>
374 </param>
375 <param name="SETUPRESAMPLINGRESULT" type="select" label="Write Result" help="Set tex if wish to write in output pdf file. default is hide">
376 <option value="hide">hide-result will not written in file</option>
377 <option value="tex">tex-result will written in file</option>
378 </param>
379 <param name="RESAMPLENUMBER" type="select" label="Set Number of Times to Resample" help="default is 10 ">
380 <option value="10">10</option>
381 <option value="5">5</option>
382 <option value="15">15</option>
383 <option value="20">20</option>
384 <option value="25">25</option>
385 </param>
386 <param name="RESAMPLENUMBERPERCENT" type="select" label="Set Resample Percent According to Need" help="default is 0.75">
387 <option value="0.75">0.75</option>
388 <option value="0.4">0.4</option>
389 <option value="0.45">0.45</option>
390 <option value="0.5">0.5</option>
391 <option value="0.55">0.55</option>
392 <option value="0.6">0.6</option>
393 <option value="0.65">0.65</option>
394 <option value="0.7">0.7</option>
395 <option value="0.8">0.8</option>
396 </param>
397 <param name="SETUPGRIDRESULT" type="select" label="Setup Grid" help="Set tex if wish to write in output pdf file. default is hide">
398 <option value="hide">hide-result will not written in file</option>
399 <option value="tex">tex-result will written in file</option>
400 </param>
401 <param name="SETUPGRIDECHO" type="select" label="Write Code in Document" help="set True if wish to print .default is False" >
402 <option value="FALSE">false</option>
403 <option value="TRUE">true</option>
404 </param>
405 <param name="SETUPGRIDSIZE" type="select" label="Set Size of The Grid." help="default is 3 ">
406 <option value="3">3</option>
407 <option value="4">4</option>
408 <option value="5">5</option>
409 <option value="6">6</option>
410 <option value="7">7</option>
411 <option value="8">8</option>
412 <option value="9">9</option>
413 <option value="10">10</option>
414 <option value="11">11</option>
415 <option value="12">12</option>
416 <option value="13">13</option>
417 <option value="14">14</option>
418 <option value="15">15</option>
419 <option value="16">16</option>
420 <option value="17">17</option>
421 <option value="18">18</option>
422 <option value="19">19</option>
423 <option value="20">20</option>
424 </param>
425 <param name="FITMODELEVAL" type="select" label="Build a Model." help="set TRUE if wish to evaluate. default is TRUE">
426 <option value="TRUE">True</option>
427 <option value="FALSE">False</option>
428 </param>
429 <param name="FITMODELRESULT" type="select" label="Write Result" help="Set tex if wish to write in output pdf file. default is tex">
430 <option value="hide">hide-result will not written in file</option>
431 <option value="tex" selected="true">tex-result will written in file</option>
432 </param>
433 <param name="FITMODELECHO" type="select" label="Write Code in Document" help="set True if wish to print .default is False" >
434 <option value="FALSE">false</option>
435 <option value="TRUE">true</option>
436 </param>
437 <param name="MODELDESCRECHO" type="select" label="Model Description" help="set True if wish to print .default is False" >
438 <option value="FALSE">false</option>
439 <option value="TRUE">true</option>
440 </param>
441 <param name="MODELDESCRRESULT" type="select" label="Write Result" help="Set tex if wish to write in output pdf file. default is tex">
442 <option value="hide">hide-result will not written in file</option>
443 <option value="tex" selected="true">tex-result will written in file</option>
444 </param>
445 <param name="RESAMPTABLEECHO" type="select" label="Create Resample Table" help="set True if wish to print .default is False" >
446 <option value="FALSE">false</option>
447 <option value="TRUE">true</option>
448 </param>
449 <param name="RESAMPTABLERESULT" type="select" label="Write Result" help="Set tex if wish to write in output pdf file. default is tex">
450 <option value="tex" selected="true">tex-result will written in file</option>
451 <option value="hide">hide-result will not written in file</option>
452 </param>
453 <param name="PROFILEPLOTECHO" type="select" label="Profile Plot" help="set True if wish to print .default is False" >
454 <option value="FALSE">false</option>
455 <option value="TRUE">true</option>
456 </param>
457 <param name="PROFILEPLOTFIG" type="select" label="Profile Plot Figure" help="set TRUE if wish to evaluate. default is TRUE">
458 <option value="TRUE">True</option>
459 <option value="FALSE">False</option>
460 </param>
461 <param name="STOPWORKERSECHO" type="select" label="Stop Workers" help="set True if wish to print .default is False" >
462 <option value="FALSE">false</option>
463 <option value="TRUE">true</option>
464 </param>
465 <param name="STOPWORKERSRESULT" type="select" label="Write Result" help="Set tex if wish to write in output pdf file. default is hide">
466 <option value="hide">hide-result will not written in file</option>
467 <option value="tex">tex-result will written in file</option>
468 </param>
469 <param name="TESTPREDRESULT" type="select" label="Test Prediction Result" help="Set tex if wish to write in output pdf file. default is tex">
470 <option value="tex" selected="true">tex-result will written in file</option>
471 <option value="hide">hide-result will not written in file</option>
472 </param>
473 <param name="TESTPREDECHO" type="select" label="Write Code in Document" help="set True if wish to print. default is False">
474 <option value="FALSE">false</option>
475 <option value="TRUE">true</option>
476 </param>
477 <param name="CLASSPROBSTEXRESULT" type="select" label="Class Probabilities Result" help="Set tex if wish to write in output pdf file. default is tex">
478 <option value="tex" selected="true">tex-result will written in file</option>
479 <option value="hide">hide-result will not written in file</option>
480 </param>
481 <param name="CLASSPROBSTEXECHO" type="select" label="Write Code in Document" help="set True if wish to print .default is False" >
482 <option value="FALSE">false</option>
483 <option value="TRUE">true</option>
484 </param>
485 <param name="CLASSPROBSTEXRESULT1" type="select" label="Class Probabilities Result Extended" help="Set tex if wish to write in output pdf file. default is tex">
486 <option value="hide">hide-result will not written in file</option>
487 <option value="tex" selected="true">tex-result will written in file</option>
488 </param>
489 <param name="CLASSPROBSTEXECHO1" type="select" label="Write Code in Document" help="set True if wish to print .default is False" >
490 <option value="FALSE">false</option>
491 <option value="TRUE">true</option>
492 </param>
493 <param name="SAVEDATAECHO" type="select" label="Write Code in Document Model Created" help="set True if wish to print .default is False" >
494 <option value="FALSE">false</option>
495 <option value="TRUE">true</option>
496 </param>
497 <param name="SAVEDATARESULT" type="select" label="Write Result" help="Set tex if wish to write in output pdf file. default is tex">
498 <option value="hide">hide-result will not written in file</option>
499 <option value="tex" selected="true">tex-result will written in file</option>
500 </param-->
501 </when>
502 </conditional>
503 </inputs>
504
505
506 <outputs>
507 <data format="RData" label="Model" name="model" />
508 <data format="pdf" label="Document" name="document" />
509 </outputs>
510 <help>
511
512 .. class:: infomark
513
514
515
516 **Instruction**
517
518 ----------
519
520 Users may change any parameter as their requirement. For normal practice
521
522 user required to provide only input csv file and method for model building.
523
524 More details are given in user manual.Please click here
525
526
527
528
529 </help>
530
531
532
533 </tool>