# HG changeset patch
# User deepakjadmin
# Date 1442583463 14400
# Node ID 013006919b9a86b37836cf9a737164c5256e4484
Uploaded
diff -r 000000000000 -r 013006919b9a testing.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/testing.xml Fri Sep 18 09:37:43 2015 -0400
@@ -0,0 +1,15 @@
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+ R version and installation test
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+ R_ROOT_DIR
+ R
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+ /bin/which R > $output_file;
+ /bin/which \$R_ROOT_DIR/bin/R >> $output_file;
+ echo \$R_ROOT_DIR >> $output_file;
+ echo \$PATH >> $output_file;
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diff -r 000000000000 -r 013006919b9a tool_dependencies.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml Fri Sep 18 09:37:43 2015 -0400
@@ -0,0 +1,105 @@
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+ http://cran.us.r-project.org/src/base/R-3/R-3.1.3.tar.gz
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+ .
+ $INSTALL_DIR
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+ $INSTALL_DIR/lib/libtcl8.4.so
+ $INSTALL_DIR/lib/libtk8.4.so
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+ http://cran.us.r-project.org/src/base/R-3/R-3.1.3.tar.gz
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+ export LDFLAGS="-L$PNG_LIBS -L$NCURSES_LIB_PATH -L$READLINE_LIB_PATH" &&
+ export LDFLAGS="$LDFLAGS -Wl,-rpath,$NCURSES_LIB_PATH" &&
+ export LDFLAGS="$LDFLAGS -Wl,-rpath,$READLINE_LIB_PATH" &&
+ export LDFLAGS="$LDFLAGS -Wl,-rpath,$PIXMAN_LIB_PATH" &&
+ export LDFLAGS="$LDFLAGS -Wl,-rpath,$PNG_LIB_PATH" &&
+ export LDFLAGS="$LDFLAGS -Wl,-rpath,$FREETYPE_LIB_PATH" &&
+ export CFLAGS="-I$PNG_INCLUDES -I$NCURSES_INCLUDE_PATH -I$READLINE_INCLUDE_PATH" &&
+ export CXXFLAGS="-I$PNG_INCLUDES -I$NCURSES_INCLUDE_PATH -I$READLINE_INCLUDE_PATH" &&
+ export CPPFLAGS="-I$PNG_INCLUDES -I$NCURSES_INCLUDE_PATH -I$READLINE_INCLUDE_PATH" &&
+ ./configure --with-tcltk \
+ --with-blas \
+ --with-lapack \
+ --with-readline \
+ --with-cairo \
+ --with-libpng \
+ --without-x \
+ --enable-R-shlib \
+ --disable-R-framework \
+ --libdir=$INSTALL_DIR/lib \
+ --prefix=$INSTALL_DIR
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+
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+ make
+ make install
+ sed -i.bak 's;$INSTALL_DIR;\${R_ROOT_DIR};g' $INSTALL_DIR/bin/R
+ sed -i.bak 's;$INSTALL_DIR;\${R_ROOT_DIR};g' $INSTALL_DIR/lib/R/bin/R
+
+
+ $INSTALL_DIR/lib/R/doc
+ $INSTALL_DIR/lib/R
+ $INSTALL_DIR/lib/R/include
+ $INSTALL_DIR/lib/R/share
+ $INSTALL_DIR
+ $INSTALL_DIR/lib/R
+ $INSTALL_DIR/lib/R
+ $INSTALL_DIR/lib/R/library
+ $INSTALL_DIR/lib/pkgconfig:$INSTALL_DIR/share/pkgconfig
+ $INSTALL_DIR/lib/pkgconfig:$INSTALL_DIR/share/pkgconfig
+ $INSTALL_DIR/bin
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+ R-3.1.3 and caret installation .
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