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<title>MayaChemTools: Documentation</title>
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<a href="http://www.mayachemtools.org" title="MayaChemTools Home"><img src="../../images/MayaChemToolsLogo.gif" border="0" alt="MayaChemTools"></a>
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<h1>Documentation</h1>
<ul>
<li><a href="./README.html">README</a></li>
<li><a href="./AnalyzeSDFilesData.html">AnalyzeSDFilesData.pl</a></li>
<li><a href="./AnalyzeSequenceFilesData.html">AnalyzeSequenceFilesData.pl</a></li>
<li><a href="./AnalyzeTextFilesData.html">AnalyzeTextFilesData.pl</a></li>
<li><a href="./AtomNeighborhoodsFingerprints.html">AtomNeighborhoodsFingerprints.pl</a></li>
<li><a href="./AtomTypesFingerprints.html">AtomTypesFingerprints.pl</a></li>
<li><a href="./CalculatePhysicochemicalProperties.html">CalculatePhysicochemicalProperties.pl</a></li>
<li><a href="./DBSchemaTablesToTextFiles.html">DBSchemaTablesToTextFiles.pl</a></li>
<li><a href="./DBSQLToTextFiles.html">DBSQLToTextFiles.pl</a></li>
<li><a href="./DBTablesToTextFiles.html">DBTablesToTextFiles.pl</a></li>
<li><a href="./ElementalAnalysis.html">ElementalAnalysis.pl</a></li>
<li><a href="./ElementalAnalysisSDFiles.html">ElementalAnalysisSDFiles.pl</a></li>
<li><a href="./ElementalAnalysisTextFiles.html">ElementalAnalysisTextFiles.pl</a></li>
<li><a href="./EStateIndiciesFingerprints.html">EStateIndiciesFingerprints.pl</a></li>
<li><a href="./ExtendedConnectivityFingerprints.html">ExtendedConnectivityFingerprints.pl</a></li>
<li><a href="./ExtractFromPDBFiles.html">ExtractFromPDBFiles.pl</a></li>
<li><a href="./ExtractFromSDFiles.html">ExtractFromSDFiles.pl</a></li>
<li><a href="./ExtractFromSequenceFiles.html">ExtractFromSequenceFiles.pl</a></li>
<li><a href="./ExtractFromTextFiles.html">ExtractFromTextFiles.pl</a></li>
<li><a href="./FilterSDFiles.html">FilterSDFiles.pl</a></li>
<li><a href="./InfoAminoAcids.html">InfoAminoAcids.pl</a></li>
<li><a href="./InfoFingerprintsFiles.html">InfoFingerprintsFiles.pl</a></li>
<li><a href="./InfoNucleicAcids.html">InfoNucleicAcids.pl</a></li>
<li><a href="./InfoPDBFiles.html">InfoPDBFiles.pl</a></li>
<li><a href="./InfoPeriodicTableElements.html">InfoPeriodicTableElements.pl</a></li>
<li><a href="./InfoSDFiles.html">InfoSDFiles.pl</a></li>
<li><a href="./InfoSequenceFiles.html">InfoSequenceFiles.pl</a></li>
<li><a href="./InfoTextFiles.html">InfoTextFiles.pl</a></li>
<li><a href="./JoinSDFiles.html">JoinSDFiles.pl</a></li>
<li><a href="./JoinTextFiles.html">JoinTextFiles.pl</a></li>
<li><a href="./MACCSKeysFingerprints.html">MACCSKeysFingerprints.pl</a></li>
<li><a href="./MergeTextFiles.html">MergeTextFiles.pl</a></li>
<li><a href="./MergeTextFilesWithSD.html">MergeTextFilesWithSD.pl</a></li>
<li><a href="./ModifyNewLineChar.html">ModifyNewLineChar.pl</a></li>
<li><a href="./ModifyPDBFiles.html">ModifyPDBFiles.pl</a></li>
<li><a href="./ModifySDFilesDataFields.html">ModifySDFilesDataFields.pl</a></li>
<li><a href="./ModifyTextFilesFormat.html">ModifyTextFilesFormat.pl</a></li>
<li><a href="./MolFilesToSD.html">MolFilesToSD.pl</a></li>
<li><a href="./PathLengthFingerprints.html">PathLengthFingerprints.pl</a></li>
<li><a href="./SDFilesToHTML.html">SDFilesToHTML.pl</a></li>
<li><a href="./SDToMolFiles.html">SDToMolFiles.pl</a></li>
<li><a href="./SimilarityMatricesFingerprints.html">SimilarityMatricesFingerprints.pl</a></li>
<li><a href="./SimilaritySearchingFingerprints.html">SimilaritySearchingFingerprints.pl</a></li>
<li><a href="./SortSDFiles.html">SortSDFiles.pl</a></li>
<li><a href="./SortTextFiles.html">SortTextFiles.pl</a></li>
<li><a href="./SplitSDFiles.html">SplitSDFiles.pl</a></li>
<li><a href="./SplitTextFiles.html">SplitTextFiles.pl</a></li>
<li><a href="./TextFilesToHTML.html">TextFilesToHTML.pl</a></li>
<li><a href="./TextFilesToSDFiles.html">TextFilesToSDFiles.pl</a></li>
<li><a href="./TopologicalAtomPairsFingerprints.html">TopologicalAtomPairsFingerprints.pl</a></li>
<li><a href="./TopologicalAtomTorsionsFingerprints.html">TopologicalAtomTorsionsFingerprints.pl</a></li>
<li><a href="./TopologicalAtomTripletsFingerprints.html">TopologicalAtomTripletsFingerprints.pl</a></li>
<li><a href="./TopologicalPharmacophoreAtomPairsFingerprints.html">TopologicalPharmacophoreAtomPairsFingerprints.pl</a></li>
<li><a href="./TopologicalPharmacophoreAtomTripletsFingerprints.html">TopologicalPharmacophoreAtomTripletsFingerprints.pl</a></li>
<li><a href="./EndPage.html">The End</a></li>
</ul>
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<tr align="left" valign="top"><td width="33%" align="left"><a href="./README.html" title="README.html">Next</a>&nbsp;&nbsp;<a href="./EndPage.html" title="EndPage.html">Last</a></td><td width="34%" align="middle"><strong>March 29, 2015</strong></td><td width="33%" align="right"><strong>MayaChemTools</strong></td></tr>
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