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date Wed, 20 Jan 2016 11:55:01 -0500
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+++ b/mayachemtools/docs/scripts/html/ModifyNewLineChar.html	Wed Jan 20 11:55:01 2016 -0500
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+<html>
+<head>
+<title>MayaChemTools:Documentation:ModifyNewLineChar.pl</title>
+<meta http-equiv="content-type" content="text/html;charset=utf-8">
+<link rel="stylesheet" type="text/css" href="../../css/MayaChemTools.css">
+</head>
+<body leftmargin="20" rightmargin="20" topmargin="10" bottommargin="10">
+<br/>
+<center>
+<a href="http://www.mayachemtools.org" title="MayaChemTools Home"><img src="../../images/MayaChemToolsLogo.gif" border="0" alt="MayaChemTools"></a>
+</center>
+<br/>
+<div class="DocNav">
+<table width="100%" border=0 cellpadding=0 cellspacing=2>
+<tr align="left" valign="top"><td width="33%" align="left"><a href="./MergeTextFilesWithSD.html" title="MergeTextFilesWithSD.html">Previous</a>&nbsp;&nbsp;<a href="./index.html" title="Table of Contents">TOC</a>&nbsp;&nbsp;<a href="./ModifyPDBFiles.html" title="ModifyPDBFiles.html">Next</a></td><td width="34%" align="middle"><strong>ModifyNewLineChar.pl</strong></td><td width="33%" align="right"><a href="././code/ModifyNewLineChar.html" title="View source code">Code</a>&nbsp;|&nbsp;<a href="./../pdf/ModifyNewLineChar.pdf" title="PDF US Letter Size">PDF</a>&nbsp;|&nbsp;<a href="./../pdfgreen/ModifyNewLineChar.pdf" title="PDF US Letter Size with narrow margins: www.changethemargins.com">PDFGreen</a>&nbsp;|&nbsp;<a href="./../pdfa4/ModifyNewLineChar.pdf" title="PDF A4 Size">PDFA4</a>&nbsp;|&nbsp;<a href="./../pdfa4green/ModifyNewLineChar.pdf" title="PDF A4 Size with narrow margins: www.changethemargins.com">PDFA4Green</a></td></tr>
+</table>
+</div>
+<p>
+</p>
+<h2>NAME</h2>
+<p>ModifyNewLineChar.pl - Modify new line char(s)</p>
+<p>
+</p>
+<h2>SYNOPSIS</h2>
+<p>ModifyNewLineChar.pl File(s)...</p>
+<p>ModifyNewLineChar.pl [<strong>-h, --help</strong>] [<strong>-m, --mode</strong> Unix | Mac | Windows] [<strong>-o, --overwrite</strong>]
+[<strong>-r, --root</strong> rootname] [<strong>-w, --workingdir</strong> dirname] File(s)...</p>
+<p>
+</p>
+<h2>DESCRIPTION</h2>
+<p>Modify new line char(s) in ASCII files to interchange among Unix, Windows, and Mac
+formats.</p>
+<p>
+</p>
+<h2>OPTIONS</h2>
+<dl>
+<dt><strong><strong>-h, --help</strong></strong></dt>
+<dd>
+<p>Print this help message.</p>
+</dd>
+<dt><strong><strong>-m, --mode</strong> <em>Unix | Mac | Windows</em></strong></dt>
+<dd>
+<p>New line  char(s) mode. Possible values: <em>Unix, Mac, or Windows</em>. Default: <em>Unix</em>. Here
+are default values for new line char(s): <em>Unix - \n; Windows: \r\n; Mac - \r</em></p>
+</dd>
+<dt><strong><strong>-o, --overwrite</strong></strong></dt>
+<dd>
+<p>Overwrite existing files.</p>
+</dd>
+<dt><strong><strong>-r, --root</strong> <em>rootname</em></strong></dt>
+<dd>
+<p>New text file name is generated using the root: &lt;Root&gt;.&lt;Ext&gt;. Default new file name:
+&lt;InitialFileName&gt;&lt;Mode&gt;.&lt;InitialFileExt&gt;. This option is ignored for multiple input files.</p>
+</dd>
+<dt><strong><strong>-w, --workingdir</strong> <em>dirname</em></strong></dt>
+<dd>
+<p>Location of working directory. Default: current directory.</p>
+</dd>
+</dl>
+<p>
+</p>
+<h2>EXAMPLES</h2>
+<p>To use Unix new line char and generate NewSample1.csv file, type:</p>
+<div class="ExampleBox">
+    % ModifyNewLineChar.pl -m Unix -r NewSample1 -o Sample1.csv</div>
+<p>To use Mac new line char and generate NewSample1.sdf file, type:</p>
+<div class="ExampleBox">
+    % ModifyNewLineChar.pl -m Mac -r NewSample1 -o Sample1.sdf</div>
+<p>To use Windows new line chars and generate NewSample1.csv file, type:</p>
+<div class="ExampleBox">
+    % ModifyNewLineChar.pl -m Windows -r NewSample1 -o Sample1.csv</div>
+<p>
+</p>
+<h2>AUTHOR</h2>
+<p><a href="mailto:msud@san.rr.com">Manish Sud</a></p>
+<p>
+</p>
+<h2>SEE ALSO</h2>
+<p><a href="./ModifyTextFilesFormat.html">ModifyTextFilesFormat.pl</a>
+</p>
+<p>
+</p>
+<h2>COPYRIGHT</h2>
+<p>Copyright (C) 2015 Manish Sud. All rights reserved.</p>
+<p>This file is part of MayaChemTools.</p>
+<p>MayaChemTools is free software; you can redistribute it and/or modify it under
+the terms of the GNU Lesser General Public License as published by the Free
+Software Foundation; either version 3 of the License, or (at your option)
+any later version.</p>
+<p>&nbsp</p><p>&nbsp</p><div class="DocNav">
+<table width="100%" border=0 cellpadding=0 cellspacing=2>
+<tr align="left" valign="top"><td width="33%" align="left"><a href="./MergeTextFilesWithSD.html" title="MergeTextFilesWithSD.html">Previous</a>&nbsp;&nbsp;<a href="./index.html" title="Table of Contents">TOC</a>&nbsp;&nbsp;<a href="./ModifyPDBFiles.html" title="ModifyPDBFiles.html">Next</a></td><td width="34%" align="middle"><strong>March 29, 2015</strong></td><td width="33%" align="right"><strong>ModifyNewLineChar.pl</strong></td></tr>
+</table>
+</div>
+<br />
+<center>
+<img src="../../images/h2o2.png">
+</center>
+</body>
+</html>