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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/mayachemtools/docs/modules/html/Path.html Wed Jan 20 11:55:01 2016 -0500 @@ -0,0 +1,259 @@ +<html> +<head> +<title>MayaChemTools:Documentation:Graph::Path.pm</title> +<meta http-equiv="content-type" content="text/html;charset=utf-8"> +<link rel="stylesheet" type="text/css" href="../../css/MayaChemTools.css"> +</head> +<body leftmargin="20" rightmargin="20" topmargin="10" bottommargin="10"> +<br/> +<center> +<a href="http://www.mayachemtools.org" title="MayaChemTools Home"><img src="../../images/MayaChemToolsLogo.gif" border="0" alt="MayaChemTools"></a> +</center> +<br/> +<div class="DocNav"> +<table width="100%" border=0 cellpadding=0 cellspacing=2> +<tr align="left" valign="top"><td width="33%" align="left"><a href="./GraphMatrix.html" title="GraphMatrix.html">Previous</a> <a href="./index.html" title="Table of Contents">TOC</a> <a href="./PathGraph.html" title="PathGraph.html">Next</a></td><td width="34%" align="middle"><strong>Graph::Path.pm</strong></td><td width="33%" align="right"><a href="././code/Path.html" title="View source code">Code</a> | <a href="./../pdf/Path.pdf" title="PDF US Letter Size">PDF</a> | <a href="./../pdfgreen/Path.pdf" title="PDF US Letter Size with narrow margins: www.changethemargins.com">PDFGreen</a> | <a href="./../pdfa4/Path.pdf" title="PDF A4 Size">PDFA4</a> | <a href="./../pdfa4green/Path.pdf" title="PDF A4 Size with narrow margins: www.changethemargins.com">PDFA4Green</a></td></tr> +</table> +</div> +<p> +</p> +<h2>NAME</h2> +<p>Path - Path class</p> +<p> +</p> +<h2>SYNOPSIS</h2> +<p>use Graph::Path;</p> +<p>use Graph::Path qw(:all);</p> +<p> +</p> +<h2>DESCRIPTION</h2> +<p><strong>Path</strong> class provides the following methods:</p> +<p> <a href="#new">new</a>, <a href="#addvertex">AddVertex</a>, <a href="#addvertices">AddVertices</a>, <a href="#copy">Copy</a>, <a href="#getcommonvertices">GetCommonVertices</a>, <a href="#getedges">GetEdges</a>, <a href="#getendvertex">GetEndVertex</a> +, <a href="#getlength">GetLength</a>, <a href="#getstartvertex">GetStartVertex</a>, <a href="#getterminalvertices">GetTerminalVertices</a>, <a href="#getvertex">GetVertex</a>, <a href="#getvertices">GetVertices</a>, <a href="#iscycle">IsCycle</a> +, <a href="#isindependentcyclicpath">IsIndependentCyclicPath</a>, <a href="#isindependentpath">IsIndependentPath</a>, <a href="#ispath">IsPath</a>, <a href="#join">Join</a>, <a href="#joinatvertex">JoinAtVertex</a>, <a href="#popvertex">PopVertex</a> +, <a href="#pushvertex">PushVertex</a>, <a href="#pushvertices">PushVertices</a>, <a href="#reverse">Reverse</a>, <a href="#shiftvertex">ShiftVertex</a>, <a href="#stringifypath">StringifyPath</a>, <a href="#unshiftvertex">UnshiftVertex</a> +, <a href="#unshiftvertices">UnshiftVertices</a> +</p><p>Path is a sequential list of vertices with an edge between two successive vertices. The path +becomes a cycle when start vertex and end vertex are the same.</p> +<p>The following operators are overloaded:</p> +<div class="OptionsBox"> + "" == eq</div> +<p> +</p> +<h2>METHODS</h2> +<dl> +<dt><strong><a name="new" class="item"><strong>new</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $NewPath = new Path(); +<br/> $NewPath = new Path(@VertexIDs);</div> +<p>Using specified <em>VertexIDs</em>, <strong>new</strong> method creates a new <strong>Path</strong> object and returns +newly created <strong>Path</strong> object.</p> +</dd> +<dt><strong><a name="addvertex" class="item"><strong>AddVertex</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $Path->AddVertex($VertexID);</div> +<p>Adds <em>VertexID</em> to <em>Path</em> and returns <em>Path</em>.</p> +</dd> +<dt><strong><a name="addvertices" class="item"><strong>AddVertices</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $Path->AddVertices(@VertexIDs);</div> +<p>Adds vertices using <em>VertexIDs</em> to <em>Path</em> and returns <em>Graph</em>.</p> +</dd> +<dt><strong><a name="copy" class="item"><strong>Copy</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $Return = $Path->Copy();</div> +<p>Copies <em>Path</em> and its associated data using <strong>Storable::dclone</strong> and returns a new +<strong>Path</strong> object.</p> +</dd> +<dt><strong><a name="getcommonvertices" class="item"><strong>GetCommonVertices</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + @CommonVertices = $Path->GetCommonVertices($OtherPath); +<br/> $NumOfCommonVertices = $Path->GetCommonVertices($OtherPath);</div> +<p>Returns an array containing common vertex IDs between two paths. In scalar context, number +of common vertices is returned.</p> +</dd> +<dt><strong><a name="getedges" class="item"><strong>GetEdges</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + @EdgesVertexIDs = $Path->GetEdges(); +<br/> $NumOfEdges = $Path->GetEdges();</div> +<p>Returns an array containg successive paris of vertex IDs corresponding to all edges in <em>Path</em>. +In scalar context, the number of edges is returned.</p> +</dd> +<dt><strong><a name="getendvertex" class="item"><strong>GetEndVertex</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $VertexID = $Path->GetEndVertex();</div> +<p>Returns <strong>VertexID</strong> of end vertex in <em>Path</em>.</p> +</dd> +<dt><strong><a name="getlength" class="item"><strong>GetLength</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $Length = $Path->GetLength();</div> +<p>Returns <strong>Length</strong> of <em>Path</em> corresponding to number of vertices in <em>Path</em>.</p> +</dd> +<dt><strong><a name="getstartvertex" class="item"><strong>GetStartVertex</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $VertexID = $Path->GetStartVertex();</div> +<p>Returns <strong>VertexID</strong> of start vertex in <em>Path</em>.</p> +</dd> +<dt><strong><a name="getterminalvertices" class="item"><strong>GetTerminalVertices</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + ($StartVertexID, $EndVertexID) = $Path->GetTerminalVertices();</div> +<p>Returns vertex IDs of start and end vertices in <em>Path</em>.</p> +</dd> +<dt><strong><a name="getvertex" class="item"><strong>GetVertex</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $VertexID = $Path->GetVertex($Index);</div> +<p>Returns specific vertex ID from <em>Path</em> corresponding to <em>Index</em> with indicies starting from 0.</p> +</dd> +<dt><strong><a name="getvertices" class="item"><strong>GetVertices</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + @Vertices = $Path->GetVertices(); +<br/> $NumOfVertices = $Path->GetVertices();</div> +<p>Returns an array containing all vertex IDs in <em>Path</em>. In scalar context, number of vertices +is returned.</p> +</dd> +<dt><strong><a name="iscycle" class="item"><strong>IsCycle</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $Status = $Path->IsCycle();</div> +<p>Returns 1 or 0 based on whether <em>Path</em> is a <strong>CyclicPath</strong> which has the same start and +end vertex IDs.</p> +</dd> +<dt><strong><a name="isindependentcyclicpath" class="item"><strong>IsIndependentCyclicPath</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $Status = $Path->IsIndependentCyclicPath();</div> +<p>Returns 1 or 0 based on whether <em>Path</em> is an independent <strong>CyclicPath</strong>. For a <em>Path</em> to be +an independent cyclic path, it must be a cyclic path and have unique vertices.</p> +</dd> +<dt><strong><a name="isindependentpath" class="item"><strong>IsIndependentPath</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $Status = $Path->IsIndependentPath();</div> +<p>Returns 1 or 0 based on whether <em>Path</em> is an independent <strong>Path</strong>. For a <em>Path</em> to be +an independent path, it must have unique vertices.</p> +</dd> +<dt><strong><a name="ispath" class="item"><strong>IsPath</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $Status = Graph::Path::IsPath();</div> +<p>Returns 1 or 0 based on whether <em>Object</em> is a <strong>Path</strong> object</p> +</dd> +<dt><strong><a name="join" class="item"><strong>Join</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $NewPath = $Path->Join($OtherPath); +<br/> $NewPath = $Path->Join(@VertexIDs);</div> +<p>Joins existing <em>Path</em> with a new path specified as a <em>OtherPath</em> object or an array of <em>VertexIDs</em> +and returns <em>NewPath</em>.</p> +<p>In order to successfully join two paths, terminal vertices must have a common vertex. Based on the +common terminal vertex found, additional path vertices are added to the current <em>Path</em> in one of +the following four ways:</p> +<div class="OptionsBox"> + . EndVertex = NewStartVertex: New path at end of current path with + same vertices order</div> +<div class="OptionsBox"> + . EndVertex = NewEndVertex: New path at end of current path with + reversed vertices order</div> +<div class="OptionsBox"> + . StartVertex = NewEndVertex: New path at front of current path + with same vertices order</div> +<div class="OptionsBox"> + . StartVertex = NewStartVertex: New path at front of current path + with reversed vertices order</div> +</dd> +<dt><strong><a name="joinatvertex" class="item"><strong>JoinAtVertex</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $NewPath = $Path->JoinAtVertex($OtherPath, $CenterVertexID);</div> +<p>Joins existing <em>Path</em> with <em>OtherPath</em> at a specified <em>CeterVertexID</em> and returns a <em>NewPath</em>.</p> +</dd> +<dt><strong><a name="popvertex" class="item"><strong>PopVertex</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $Path->PopVertex();</div> +<p>Removes end vertex from <em>Path</em> and returns <em>Path</em>.</p> +</dd> +<dt><strong><a name="pushvertex" class="item"><strong>PushVertex</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $Path->PushVertex($VertexID);</div> +<p>Adds <em>VertexID</em> to <em>Path</em> after end vertex and returns <em>Path</em>.</p> +</dd> +<dt><strong><a name="pushvertices" class="item"><strong>PushVertices</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $Path->PushVertices(@VertexIDs);</div> +<p>Adds <em>VertexIDs</em> to <em>Path</em> after end vertex and returns <em>Path</em>.</p> +</dd> +<dt><strong><a name="reverse" class="item"><strong>Reverse</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $Path->Reverse();</div> +<p>Reverses order of vertices in <em>Path</em> and returns <em>Path</em>.</p> +</dd> +<dt><strong><a name="shiftvertex" class="item"><strong>ShiftVertex</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $Path->ShiftVertex();</div> +<p>Removes start vertex from <em>Path</em> and returns <em>Path</em>.</p> +</dd> +<dt><strong><a name="stringifypath" class="item"><strong>StringifyPath</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $String = $Path->StringifyPath();</div> +<p>Returns a string containing information about <em>Path</em> object.</p> +</dd> +<dt><strong><a name="unshiftvertex" class="item"><strong>UnshiftVertex</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $Path->UnshiftVertex($VertexID);</div> +<p>Adds <em>VertexID</em> to <em>Path</em> before start vertex and returns <em>Path</em>.</p> +</dd> +<dt><strong><a name="unshiftvertices" class="item"><strong>UnshiftVertices</strong></a></strong></dt> +<dd> +<div class="OptionsBox"> + $Path->UnshiftVertices(@VertexIDs);</div> +<p>Adds <em>VertexIDs</em> to <em>Path</em> before start vertex and returns <em>Path</em>.</p> +</dd> +</dl> +<p> +</p> +<h2>AUTHOR</h2> +<p><a href="mailto:msud@san.rr.com">Manish Sud</a></p> +<p> +</p> +<h2>SEE ALSO</h2> +<p><a href="./PathGraph.html">PathGraph.pm</a>, <a href="./PathsTraversal.html">PathsTraversal.pm</a> +</p> +<p> +</p> +<h2>COPYRIGHT</h2> +<p>Copyright (C) 2015 Manish Sud. All rights reserved.</p> +<p>This file is part of MayaChemTools.</p> +<p>MayaChemTools is free software; you can redistribute it and/or modify it under +the terms of the GNU Lesser General Public License as published by the Free +Software Foundation; either version 3 of the License, or (at your option) +any later version.</p> +<p> </p><p> </p><div class="DocNav"> +<table width="100%" border=0 cellpadding=0 cellspacing=2> +<tr align="left" valign="top"><td width="33%" align="left"><a href="./GraphMatrix.html" title="GraphMatrix.html">Previous</a> <a href="./index.html" title="Table of Contents">TOC</a> <a href="./PathGraph.html" title="PathGraph.html">Next</a></td><td width="34%" align="middle"><strong>March 29, 2015</strong></td><td width="33%" align="right"><strong>Graph::Path.pm</strong></td></tr> +</table> +</div> +<br /> +<center> +<img src="../../images/h2o2.png"> +</center> +</body> +</html>