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14 <a name="package-FileIO::FingerprintsFPFileIO-"></a> 1 <span class="k">package </span><span class="i">FileIO::FingerprintsFPFileIO</span><span class="sc">;</span>
15 2 <span class="c">#</span>
16 3 <span class="c"># $RCSfile: FingerprintsFPFileIO.pm,v $</span>
17 4 <span class="c"># $Date: 2015/02/28 20:48:43 $</span>
18 5 <span class="c"># $Revision: 1.19 $</span>
19 6 <span class="c">#</span>
20 7 <span class="c"># Author: Manish Sud &lt;msud@san.rr.com&gt;</span>
21 8 <span class="c">#</span>
22 9 <span class="c"># Copyright (C) 2015 Manish Sud. All rights reserved.</span>
23 10 <span class="c">#</span>
24 11 <span class="c"># This file is part of MayaChemTools.</span>
25 12 <span class="c">#</span>
26 13 <span class="c"># MayaChemTools is free software; you can redistribute it and/or modify it under</span>
27 14 <span class="c"># the terms of the GNU Lesser General Public License as published by the Free</span>
28 15 <span class="c"># Software Foundation; either version 3 of the License, or (at your option) any</span>
29 16 <span class="c"># later version.</span>
30 17 <span class="c">#</span>
31 18 <span class="c"># MayaChemTools is distributed in the hope that it will be useful, but without</span>
32 19 <span class="c"># any warranty; without even the implied warranty of merchantability of fitness</span>
33 20 <span class="c"># for a particular purpose. See the GNU Lesser General Public License for more</span>
34 21 <span class="c"># details.</span>
35 22 <span class="c">#</span>
36 23 <span class="c"># You should have received a copy of the GNU Lesser General Public License</span>
37 24 <span class="c"># along with MayaChemTools; if not, see &lt;http://www.gnu.org/licenses/&gt; or</span>
38 25 <span class="c"># write to the Free Software Foundation Inc., 59 Temple Place, Suite 330,</span>
39 26 <span class="c"># Boston, MA, 02111-1307, USA.</span>
40 27 <span class="c">#</span>
41 28
42 29 <span class="k">use</span> <span class="w">strict</span><span class="sc">;</span>
43 30 <span class="k">use</span> <span class="w">Carp</span><span class="sc">;</span>
44 31 <span class="k">use</span> <span class="w">Exporter</span><span class="sc">;</span>
45 32 <span class="k">use</span> <span class="w">Scalar::Util</span> <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
46 33 <span class="k">use</span> <span class="w">TextUtil</span> <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
47 34 <span class="k">use</span> <span class="w">FileUtil</span> <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
48 35 <span class="k">use</span> <span class="w">TimeUtil</span> <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
49 36 <span class="k">use</span> <span class="w">Fingerprints::FingerprintsStringUtil</span> <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
50 37 <span class="k">use</span> <span class="w">PackageInfo</span> <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
51 38 <span class="k">use</span> <span class="w">FileIO::FileIO</span><span class="sc">;</span>
52 39
53 40 <span class="k">use</span> <span class="w">vars</span> <span class="q">qw(@ISA @EXPORT @EXPORT_OK %EXPORT_TAGS)</span><span class="sc">;</span>
54 41
55 42 <span class="i">@ISA</span> = <span class="q">qw(FileIO::FileIO Exporter)</span><span class="sc">;</span>
56 43 <span class="i">@EXPORT</span> = <span class="q">qw()</span><span class="sc">;</span>
57 44 <span class="i">@EXPORT_OK</span> = <span class="q">qw(IsFingerprintsFPFile)</span><span class="sc">;</span>
58 45
59 46 <span class="i">%EXPORT_TAGS</span> = <span class="s">(</span><span class="w">all</span> <span class="cm">=&gt;</span> <span class="s">[</span><span class="i">@EXPORT</span><span class="cm">,</span> <span class="i">@EXPORT_OK</span><span class="s">]</span><span class="s">)</span><span class="sc">;</span>
60 47
61 48 <span class="c"># Setup class variables...</span>
62 49 <span class="k">my</span><span class="s">(</span><span class="i">$ClassName</span><span class="s">)</span><span class="sc">;</span>
63 50 <span class="i">_InitializeClass</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
64 51
65 52 <span class="c"># Class constructor...</span>
66 <a name="new-"></a> 53 <span class="k">sub </span><span class="m">new</span> <span class="s">{</span>
67 54 <span class="k">my</span><span class="s">(</span><span class="i">$Class</span><span class="cm">,</span> <span class="i">%NamesAndValues</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
68 55
69 56 <span class="c"># Initialize object...</span>
70 57 <span class="k">my</span> <span class="i">$This</span> = <span class="i">$Class</span><span class="i">-&gt;SUPER::new</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
71 58 <span class="k">bless</span> <span class="i">$This</span><span class="cm">,</span> <span class="k">ref</span><span class="s">(</span><span class="i">$Class</span><span class="s">)</span> || <span class="i">$Class</span><span class="sc">;</span>
72 59 <span class="i">$This</span><span class="i">-&gt;_InitializeFingerprintsFPFileIO</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
73 60
74 61 <span class="i">$This</span><span class="i">-&gt;_InitializeFingerprintsFPFileIOProperties</span><span class="s">(</span><span class="i">%NamesAndValues</span><span class="s">)</span><span class="sc">;</span>
75 62
76 63 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
77 64 <span class="s">}</span>
78 65
79 66 <span class="c"># Initialize object data...</span>
80 67 <span class="c">#</span>
81 <a name="_InitializeFingerprintsFPFileIO-"></a> 68 <span class="k">sub </span><span class="m">_InitializeFingerprintsFPFileIO</span> <span class="s">{</span>
82 69 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
83 70
84 71 <span class="c"># Fingerprints string data format during read/write...</span>
85 72 <span class="c">#</span>
86 73 <span class="c"># For file read:</span>
87 74 <span class="c">#</span>
88 75 <span class="c"># AutoDetect - automatically detect format of fingerprints string</span>
89 76 <span class="c"># FingerprintsBitVectorString - Bit vector fingerprints string format</span>
90 77 <span class="c"># FingerprintsVectorString - Vector fingerprints string format</span>
91 78 <span class="c">#</span>
92 79 <span class="c"># Default value: AutoDetect</span>
93 80 <span class="c">#</span>
94 81 <span class="c"># For file write:</span>
95 82 <span class="c">#</span>
96 83 <span class="c"># FingerprintsBitVectorString - Bit vector fingerprints string format</span>
97 84 <span class="c"># FingerprintsVectorString - Vector fingerprints string format</span>
98 85 <span class="c">#</span>
99 86 <span class="c"># Default value: undef</span>
100 87 <span class="c">#</span>
101 88 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsStringMode</span>} = <span class="k">undef</span><span class="sc">;</span>
102 89
103 90 <span class="c"># For file read:</span>
104 91 <span class="c">#</span>
105 92 <span class="c"># o Fingerprints bit-vector and vector object for current fingerprints string</span>
106 93 <span class="c">#</span>
107 94 <span class="c"># For file write:</span>
108 95 <span class="c">#</span>
109 96 <span class="c"># o Fingerprints bit-vector and vector object for current fingerprints string</span>
110 97 <span class="c"># o Any supported fingerprints object: PathLengthFingerprints, ExtendedConnectivity, and so on.</span>
111 98 <span class="c">#</span>
112 99 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsObject</span>} = <span class="k">undef</span><span class="sc">;</span>
113 100
114 101 <span class="c"># Fingeprints string for current line during read/write...</span>
115 102 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>} = <span class="k">undef</span><span class="sc">;</span>
116 103
117 104 <span class="c"># Partial fingeprints string corresponding to what&#39;s on the current line for current</span>
118 105 <span class="c"># line during read/write...</span>
119 106 <span class="i">$This</span>-&gt;{<span class="w">PartialFingerprintsString</span>} = <span class="k">undef</span><span class="sc">;</span>
120 107
121 108 <span class="c"># Required header data keys and values during read/write...</span>
122 109 <span class="i">@</span>{<span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeys</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
123 110 <span class="i">%</span>{<span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeysAndValues</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
124 111
125 112 <span class="c"># First data line read/write...</span>
126 113 <span class="i">$This</span>-&gt;{<span class="w">FirstDataLineIO</span>} = <span class="n">1</span><span class="sc">;</span>
127 114
128 115 <span class="c"># Current fingerprints string data line number during read/write...</span>
129 116 <span class="i">$This</span>-&gt;{<span class="w">LineNum</span>} = <span class="n">0</span><span class="sc">;</span>
130 117
131 118 <span class="c"># FP line data during read/write...</span>
132 119 <span class="i">$This</span>-&gt;{<span class="w">DataLine</span>} = <span class="k">undef</span><span class="sc">;</span>
133 120
134 121 <span class="c"># Initialize parameters for read...</span>
135 122 <span class="i">$This</span><span class="i">-&gt;_InitializeFingerprintsFPFileIORead</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
136 123
137 124 <span class="c"># Initialize parameters for write...</span>
138 125 <span class="i">$This</span><span class="i">-&gt;_InitializeFingerprintsFPFileIOWrite</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
139 126
140 127 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
141 128 <span class="s">}</span>
142 129
143 130 <span class="c"># Initialize class ...</span>
144 <a name="_InitializeClass-"></a> 131 <span class="k">sub </span><span class="m">_InitializeClass</span> <span class="s">{</span>
145 132 <span class="c">#Class name...</span>
146 133 <span class="i">$ClassName</span> = <span class="w">__PACKAGE__</span><span class="sc">;</span>
147 134
148 135 <span class="s">}</span>
149 136
150 137 <span class="c"># Initialize object data for reading fingerprints FP file...</span>
151 138 <span class="c">#</span>
152 <a name="_InitializeFingerprintsFPFileIORead-"></a> 139 <span class="k">sub </span><span class="m">_InitializeFingerprintsFPFileIORead</span> <span class="s">{</span>
153 140 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
154 141
155 142 <span class="c"># Header data keys and values...</span>
156 143 <span class="c">#</span>
157 144 <span class="i">@</span>{<span class="i">$This</span>-&gt;{<span class="w">HeaderDataKeys</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
158 145 <span class="i">%</span>{<span class="i">$This</span>-&gt;{<span class="w">HeaderDataKeysAndValues</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
159 146 <span class="i">%</span>{<span class="i">$This</span>-&gt;{<span class="w">CannonicalHeaderDataKeysAndValues</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
160 147
161 148 <span class="c"># By default, the fingerprints data is assumed to be valid and no validation is</span>
162 149 <span class="c"># performed before generating fingerprints objects...</span>
163 150 <span class="c">#</span>
164 151 <span class="i">$This</span>-&gt;{<span class="w">ValidateData</span>} = <span class="n">1</span><span class="sc">;</span>
165 152
166 153 <span class="c"># Level of detail to print during validation of data for invalid or missing data...</span>
167 154 <span class="i">$This</span>-&gt;{<span class="w">DetailLevel</span>} = <span class="n">1</span><span class="sc">;</span>
168 155
169 156 <span class="c"># Number of missing and invalid fingerprints string data lines...</span>
170 157 <span class="i">$This</span>-&gt;{<span class="w">NumOfLinesWithMissingData</span>} = <span class="n">0</span><span class="sc">;</span>
171 158 <span class="i">$This</span>-&gt;{<span class="w">NumOfLinesWithInvalidData</span>} = <span class="n">0</span><span class="sc">;</span>
172 159
173 160 <span class="c"># Compound ID for current fingerprints string...</span>
174 161 <span class="i">$This</span>-&gt;{<span class="w">CompoundID</span>} = <span class="k">undef</span><span class="sc">;</span>
175 162
176 163 <span class="c"># Status of data in fingerprints FP file...</span>
177 164 <span class="i">$This</span>-&gt;{<span class="w">ValidFileData</span>} = <span class="n">0</span><span class="sc">;</span>
178 165 <span class="i">$This</span>-&gt;{<span class="w">ValidRequiredHeaderDataKeys</span>} = <span class="n">0</span><span class="sc">;</span>
179 166 <span class="i">$This</span>-&gt;{<span class="w">ValidFingerprintsStringMode</span>} = <span class="n">0</span><span class="sc">;</span>
180 167
181 168 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
182 169 <span class="s">}</span>
183 170
184 171 <span class="c"># Initialize object data for writing fingerprints FP file...</span>
185 172 <span class="c">#</span>
186 <a name="_InitializeFingerprintsFPFileIOWrite-"></a> 173 <span class="k">sub </span><span class="m">_InitializeFingerprintsFPFileIOWrite</span> <span class="s">{</span>
187 174 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
188 175
189 176 <span class="c"># Fingerprints bit vector string format...</span>
190 177 <span class="c">#</span>
191 178 <span class="c"># Possible values: BinaryString or HexadecimalString [Default]</span>
192 179 <span class="c">#</span>
193 180 <span class="c"># Default BitStringFormat is set during first write using Fingerprints::FingerprintsStringUtil::GetDefaultBitStringFormat.</span>
194 181 <span class="c">#</span>
195 182 <span class="i">$This</span>-&gt;{<span class="w">BitStringFormat</span>} = <span class="k">undef</span><span class="sc">;</span>
196 183
197 184 <span class="c"># Bits order in fingerprints bit vector string...</span>
198 185 <span class="c">#</span>
199 186 <span class="c"># Ascending - First bit in each byte as the lowest bit [Default]</span>
200 187 <span class="c"># Descending - First bit in each byte as the highest bit</span>
201 188 <span class="c">#</span>
202 189 <span class="c"># Default BitsOrder is set during first write using Fingerprints::FingerprintsStringUtil::GetDefaultBitsOrder.</span>
203 190 <span class="c">#</span>
204 191 <span class="i">$This</span>-&gt;{<span class="w">BitsOrder</span>} = <span class="k">undef</span><span class="sc">;</span>
205 192
206 193 <span class="c"># Fingerprints vector string format...</span>
207 194 <span class="c">#</span>
208 195 <span class="c"># Possible values: IDsAndValuesString, IDsAndValuesPairsString, ValuesAndIDsString, ValuesAndIDsPairsString, ValuesString</span>
209 196 <span class="c">#</span>
210 197 <span class="c"># Default VectorStringFormat is set during first write using Fingerprints::FingerprintsStringUtil::GetDefaultVectorStringFormat.</span>
211 198 <span class="c"># For fingerprints vector object containing vector NumericalValues, it corresponds to IDsAndValuesString; otherwise,</span>
212 199 <span class="c"># it&#39;s set to ValuesString.</span>
213 200 <span class="c">#</span>
214 201 <span class="i">$This</span>-&gt;{<span class="w">VectorStringFormat</span>} = <span class="k">undef</span><span class="sc">;</span>
215 202
216 203 <span class="c"># Overwriting existing file...</span>
217 204 <span class="i">$This</span>-&gt;{<span class="w">Overwrite</span>} = <span class="n">0</span><span class="sc">;</span>
218 205
219 206 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
220 207 <span class="s">}</span>
221 208
222 209 <span class="c"># Initialize object values...</span>
223 <a name="_InitializeFingerprintsFPFileIOProperties-"></a> 210 <span class="k">sub </span><span class="m">_InitializeFingerprintsFPFileIOProperties</span> <span class="s">{</span>
224 211 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">%NamesAndValues</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
225 212
226 213 <span class="c"># All other property names and values along with all Set/Get&lt;PropertyName&gt; methods</span>
227 214 <span class="c"># are implemented on-demand using ObjectProperty class.</span>
228 215
229 216 <span class="k">my</span><span class="s">(</span><span class="i">$Name</span><span class="cm">,</span> <span class="i">$Value</span><span class="cm">,</span> <span class="i">$MethodName</span><span class="s">)</span><span class="sc">;</span>
230 217 <span class="k">while</span> <span class="s">(</span><span class="s">(</span><span class="i">$Name</span><span class="cm">,</span> <span class="i">$Value</span><span class="s">)</span> = <span class="k">each</span> <span class="i">%NamesAndValues</span><span class="s">)</span> <span class="s">{</span>
231 218 <span class="i">$MethodName</span> = <span class="q">&quot;Set${Name}&quot;</span><span class="sc">;</span>
232 219 <span class="i">$This</span><span class="i">-&gt;$MethodName</span><span class="s">(</span><span class="i">$Value</span><span class="s">)</span><span class="sc">;</span>
233 220 <span class="s">}</span>
234 221
235 222 <span class="k">if</span> <span class="s">(</span>!<span class="k">exists</span> <span class="i">$NamesAndValues</span>{<span class="w">Name</span>}<span class="s">)</span> <span class="s">{</span>
236 223 <span class="w">croak</span> <span class="q">&quot;Error: ${ClassName}-&gt;New: Object can&#39;t be instantiated without specifying file name...&quot;</span><span class="sc">;</span>
237 224 <span class="s">}</span>
238 225
239 226 <span class="c"># Make sure it&#39;s a fingerprints file...</span>
240 227 <span class="i">$Name</span> = <span class="i">$NamesAndValues</span>{<span class="w">Name</span>}<span class="sc">;</span>
241 228 <span class="k">if</span> <span class="s">(</span>!<span class="i">$This</span><span class="i">-&gt;IsFingerprintsFPFile</span><span class="s">(</span><span class="i">$Name</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
242 229 <span class="w">croak</span> <span class="q">&quot;Error: ${ClassName}-&gt;New: Object can&#39;t be instantiated: File, $Name, doesn&#39;t appear to be fingerprints format...&quot;</span><span class="sc">;</span>
243 230 <span class="s">}</span>
244 231
245 232 <span class="k">if</span> <span class="s">(</span><span class="i">$This</span><span class="i">-&gt;GetMode</span><span class="s">(</span><span class="s">)</span> =~ <span class="q">/^Read$/i</span><span class="s">)</span> <span class="s">{</span>
246 233 <span class="i">$This</span><span class="i">-&gt;_InitializeFingerprintsFPFileIOReadProperties</span><span class="s">(</span><span class="i">%NamesAndValues</span><span class="s">)</span><span class="sc">;</span>
247 234 <span class="s">}</span>
248 235 <span class="k">elsif</span> <span class="s">(</span><span class="i">$This</span><span class="i">-&gt;GetMode</span><span class="s">(</span><span class="s">)</span> =~ <span class="q">/^(Write|Append)$/i</span><span class="s">)</span> <span class="s">{</span>
249 236 <span class="i">$This</span><span class="i">-&gt;_InitializeFingerprintsFPFileIOWriteProperties</span><span class="s">(</span><span class="i">%NamesAndValues</span><span class="s">)</span><span class="sc">;</span>
250 237 <span class="s">}</span>
251 238
252 239 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
253 240 <span class="s">}</span>
254 241
255 242 <span class="c"># Initialize object properties for reading fingerprints FP file...</span>
256 243 <span class="c">#</span>
257 <a name="_InitializeFingerprintsFPFileIOReadProperties-"></a> 244 <span class="k">sub </span><span class="m">_InitializeFingerprintsFPFileIOReadProperties</span> <span class="s">{</span>
258 245 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">%NamesAndValues</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
259 246
260 247 <span class="c"># Set default value for FingerprintsStringMode...</span>
261 248 <span class="k">if</span> <span class="s">(</span>!<span class="i">$This</span>-&gt;{<span class="w">FingerprintsStringMode</span>}<span class="s">)</span> <span class="s">{</span>
262 249 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsStringMode</span>} = <span class="q">&#39;AutoDetect&#39;</span><span class="sc">;</span>
263 250 <span class="s">}</span>
264 251
265 252 <span class="i">$This</span><span class="i">-&gt;_PrepareForReadingFingerprintsFPFileData</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
266 253
267 254 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
268 255 <span class="s">}</span>
269 256
270 257 <span class="c"># Initialize object properties for writing fingerprints FP file...</span>
271 258 <span class="c">#</span>
272 <a name="_InitializeFingerprintsFPFileIOWriteProperties-"></a> 259 <span class="k">sub </span><span class="m">_InitializeFingerprintsFPFileIOWriteProperties</span> <span class="s">{</span>
273 260 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">%NamesAndValues</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
274 261
275 262 <span class="c"># Check FingerprintsStringMode value...</span>
276 263 <span class="k">if</span> <span class="s">(</span>!<span class="k">exists</span> <span class="i">$NamesAndValues</span>{<span class="w">FingerprintsStringMode</span>}<span class="s">)</span> <span class="s">{</span>
277 264 <span class="w">croak</span> <span class="q">&quot;Error: ${ClassName}-&gt;New: Object can&#39;t be instantiated without specifying FingerprintsStringMode...&quot;</span><span class="sc">;</span>
278 265 <span class="s">}</span>
279 266
280 267 <span class="k">if</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsStringMode</span>} !~ <span class="q">/^(FingerprintsBitVectorString|FingerprintsVectorString)$/i</span><span class="s">)</span> <span class="s">{</span>
281 268 <span class="w">croak</span> <span class="q">&quot;Error: ${ClassName}-&gt;New: Object can&#39;t be instantiated: FingerprintsStringMode value, $This-&gt;{FingerprintsStringMode}, is not valid; Supported values for write/append: FingerprintsBitVectorString or FingerprintsVectorString...&quot;</span><span class="sc">;</span>
282 269 <span class="s">}</span>
283 270
284 271 <span class="i">$This</span><span class="i">-&gt;_PrepareForWritingFingerprintsFPFileData</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
285 272
286 273 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
287 274 <span class="s">}</span>
288 275
289 276 <span class="c"># Set FingerprintsStringMode...</span>
290 277 <span class="c">#</span>
291 <a name="SetFingerprintsStringMode-"></a> 278 <span class="k">sub </span><span class="m">SetFingerprintsStringMode</span> <span class="s">{</span>
292 279 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">$Value</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
293 280
294 281 <span class="c"># AutoDetect - automatically detect format of fingerprints string</span>
295 282 <span class="c"># FingerprintsBitVectorString - Bit vector fingerprints string format</span>
296 283 <span class="c"># FingerprintsVectorString - Vector fingerprints string format</span>
297 284
298 285 <span class="k">if</span> <span class="s">(</span><span class="i">$Value</span> !~ <span class="q">/^(AutoDetect|FingerprintsBitVectorString|FingerprintsVectorString)$/i</span><span class="s">)</span> <span class="s">{</span>
299 286 <span class="w">croak</span> <span class="q">&quot;Error: ${ClassName}-&gt;SetFingerprintsStringMode: FingerprintsStringMode value, $Value, is not valid; Supported values: AutoDetect, FingerprintsBitVectorString or FingerprintsVectorString...&quot;</span><span class="sc">;</span>
300 287 <span class="s">}</span>
301 288
302 289 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsStringMode</span>} = <span class="i">$Value</span><span class="sc">;</span>
303 290
304 291 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
305 292 <span class="s">}</span>
306 293
307 294 <span class="c"># Set DetailLevel...</span>
308 295 <span class="c">#</span>
309 <a name="SetDetailLevel-"></a> 296 <span class="k">sub </span><span class="m">SetDetailLevel</span> <span class="s">{</span>
310 297 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">$Value</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
311 298
312 299 <span class="k">if</span> <span class="s">(</span>!<span class="i">TextUtil::IsPositiveInteger</span><span class="s">(</span><span class="i">$Value</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
313 300 <span class="w">croak</span> <span class="q">&quot;Error: ${ClassName}-&gt;SetDetailLevel: DetailLevel value, $Value, is not valid; Supported values: &gt; 0...&quot;</span><span class="sc">;</span>
314 301 <span class="s">}</span>
315 302
316 303 <span class="i">$This</span>-&gt;{<span class="w">DetailLevel</span>} = <span class="i">$Value</span><span class="sc">;</span>
317 304
318 305 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
319 306 <span class="s">}</span>
320 307
321 308 <span class="c"># Set BitStringFormat...</span>
322 309 <span class="c">#</span>
323 <a name="SetBitStringFormat-"></a> 310 <span class="k">sub </span><span class="m">SetBitStringFormat</span> <span class="s">{</span>
324 311 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">$Value</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
325 312
326 313 <span class="k">if</span> <span class="s">(</span><span class="i">$Value</span> !~ <span class="q">/^(BinaryString|HexadecimalString)$/i</span><span class="s">)</span> <span class="s">{</span>
327 314 <span class="w">croak</span> <span class="q">&quot;Error: ${ClassName}-&gt;SetBitStringFormat: BitStringFormat value, $Value, is not valid; Supported values: BinaryString or HexadecimalString...&quot;</span><span class="sc">;</span>
328 315 <span class="s">}</span>
329 316
330 317 <span class="i">$This</span>-&gt;{<span class="w">BitStringFormat</span>} = <span class="i">$Value</span><span class="sc">;</span>
331 318
332 319 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
333 320 <span class="s">}</span>
334 321
335 322 <span class="c"># Set BitsOrder...</span>
336 323 <span class="c">#</span>
337 <a name="SetBitsOrder-"></a> 324 <span class="k">sub </span><span class="m">SetBitsOrder</span> <span class="s">{</span>
338 325 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">$Value</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
339 326
340 327 <span class="c"># Ascending - First bit in each byte as the lowest bit</span>
341 328 <span class="c"># Descending - First bit in each byte as the highest bit</span>
342 329 <span class="c">#</span>
343 330 <span class="k">if</span> <span class="s">(</span><span class="i">$Value</span> !~ <span class="q">/^(Ascending|Descending)$/i</span><span class="s">)</span> <span class="s">{</span>
344 331 <span class="w">croak</span> <span class="q">&quot;Error: ${ClassName}-&gt;SetBitsOrder: FingerprintsStringMode value, $Value, is not valid; Supported values: Ascending or Descending...&quot;</span><span class="sc">;</span>
345 332 <span class="s">}</span>
346 333
347 334 <span class="i">$This</span>-&gt;{<span class="w">BitsOrder</span>} = <span class="i">$Value</span><span class="sc">;</span>
348 335
349 336 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
350 337 <span class="s">}</span>
351 338
352 339 <span class="c"># Set compound ID...</span>
353 340 <span class="c">#</span>
354 <a name="SetCompoundID-"></a> 341 <span class="k">sub </span><span class="m">SetCompoundID</span> <span class="s">{</span>
355 342 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">$Value</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
356 343
357 344 <span class="k">if</span> <span class="s">(</span><span class="i">$Value</span> =~ <span class="q">/ /</span><span class="s">)</span> <span class="s">{</span>
358 345 <span class="i">$Value</span> =~ <span class="q">s/ //g</span><span class="sc">;</span>
359 346 <span class="w">carp</span> <span class="q">&quot;Warning: ${ClassName}-&gt;SetCompoundID: Spaces are not allowed in compound ID; They have been removed...&quot;</span><span class="sc">;</span>
360 347 <span class="s">}</span>
361 348
362 349 <span class="i">$This</span>-&gt;{<span class="w">CompoundID</span>} = <span class="i">$Value</span><span class="sc">;</span>
363 350
364 351 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
365 352 <span class="s">}</span>
366 353
367 354 <span class="c"># Set VectorStringFormat...</span>
368 355 <span class="c">#</span>
369 <a name="SetVectorStringFormat-"></a> 356 <span class="k">sub </span><span class="m">SetVectorStringFormat</span> <span class="s">{</span>
370 357 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">$Value</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
371 358
372 359 <span class="c"># Possible values: IDsAndValuesString, IDsAndValuesPairsString, ValuesAndIDsString, ValuesAndIDsPairsString</span>
373 360
374 361 <span class="k">if</span> <span class="s">(</span><span class="i">$Value</span> !~ <span class="q">/^(IDsAndValuesString|IDsAndValuesPairsString|ValuesAndIDsString|ValuesAndIDsPairsString|ValuesString)$/i</span><span class="s">)</span> <span class="s">{</span>
375 362 <span class="w">croak</span> <span class="q">&quot;Error: ${ClassName}-&gt;SetVectorStringFormat: FingerprintsStringMode value, $Value, is not valid; Supported values: IDsAndValuesString, IDsAndValuesPairsString, ValuesAndIDsString, ValuesAndIDsPairsString, or ValuesString...&quot;</span><span class="sc">;</span>
376 363 <span class="s">}</span>
377 364
378 365 <span class="i">$This</span>-&gt;{<span class="w">VectorStringFormat</span>} = <span class="i">$Value</span><span class="sc">;</span>
379 366
380 367 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
381 368 <span class="s">}</span>
382 369
383 370 <span class="c"># Get header data keys or number of header data keys in header data block...</span>
384 371 <span class="c">#</span>
385 <a name="GetHeaderDataKeys-"></a> 372 <span class="k">sub </span><span class="m">GetHeaderDataKeys</span> <span class="s">{</span>
386 373 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
387 374
388 375 <span class="k">return</span> <span class="k">wantarray</span> ? <span class="i">@</span>{<span class="i">$This</span>-&gt;{<span class="w">HeaderDataKeys</span>}} <span class="co">:</span> <span class="k">scalar</span> <span class="i">@</span>{<span class="i">$This</span>-&gt;{<span class="w">HeaderDataKeys</span>}}<span class="sc">;</span>
389 376 <span class="s">}</span>
390 377
391 378 <span class="c"># Set header data keys...</span>
392 379 <span class="c">#</span>
393 <a name="SetHeaderDataKeys-"></a> 380 <span class="k">sub </span><span class="m">SetHeaderDataKeys</span> <span class="s">{</span>
394 381 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">@Keys</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
395 382
396 383 <span class="w">croak</span> <span class="q">&quot;Error: ${ClassName}-&gt;SetHeaderDataKeys: Can&#39;t set HeaderDataKeys: Not allowed...&quot;</span><span class="sc">;</span>
397 384
398 385 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
399 386 <span class="s">}</span>
400 387
401 388 <span class="c"># Get header data keys and values hash...</span>
402 389 <span class="c">#</span>
403 <a name="GetHeaderDataKeysAndValues-"></a> 390 <span class="k">sub </span><span class="m">GetHeaderDataKeysAndValues</span> <span class="s">{</span>
404 391 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
405 392
406 393 <span class="k">return</span> <span class="i">%</span>{<span class="i">$This</span>-&gt;{<span class="w">HeaderDataKeysAndValues</span>}}<span class="sc">;</span>
407 394 <span class="s">}</span>
408 395
409 396 <span class="c"># Set header data keys and values hash...</span>
410 397 <span class="c">#</span>
411 <a name="SetHeaderDataKeysAndValues-"></a> 398 <span class="k">sub </span><span class="m">SetHeaderDataKeysAndValues</span> <span class="s">{</span>
412 399 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">%KeysAndValues</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
413 400
414 401 <span class="w">croak</span> <span class="q">&quot;Error: ${ClassName}-&gt;SetHeaderDataKeysAndValues: Can&#39;t set HeaderDataKeysAndValues: Not allowed...&quot;</span><span class="sc">;</span>
415 402
416 403 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
417 404 <span class="s">}</span>
418 405
419 406 <span class="c"># Get required header data keys or number of header data keys in header data block...</span>
420 407 <span class="c">#</span>
421 <a name="GetRequiredHeaderDataKeys-"></a> 408 <span class="k">sub </span><span class="m">GetRequiredHeaderDataKeys</span> <span class="s">{</span>
422 409 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
423 410
424 411 <span class="k">return</span> <span class="k">wantarray</span> ? <span class="i">@</span>{<span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeys</span>}} <span class="co">:</span> <span class="k">scalar</span> <span class="i">@</span>{<span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeys</span>}}<span class="sc">;</span>
425 412 <span class="s">}</span>
426 413
427 414 <span class="c"># Set required header data keys...</span>
428 415 <span class="c">#</span>
429 <a name="SetRequiredHeaderDataKeys-"></a> 416 <span class="k">sub </span><span class="m">SetRequiredHeaderDataKeys</span> <span class="s">{</span>
430 417 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">@Keys</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
431 418
432 419 <span class="w">croak</span> <span class="q">&quot;Error: ${ClassName}-&gt;SetRequiredHeaderDataKeys: Can&#39;t set RequiredHeaderDataKeys: Not allowed...&quot;</span><span class="sc">;</span>
433 420
434 421 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
435 422 <span class="s">}</span>
436 423
437 424 <span class="c"># Get required header data keys and values hash...</span>
438 425 <span class="c">#</span>
439 <a name="GetRequiredHeaderDataKeysAndValues-"></a> 426 <span class="k">sub </span><span class="m">GetRequiredHeaderDataKeysAndValues</span> <span class="s">{</span>
440 427 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
441 428
442 429 <span class="k">return</span> <span class="i">%</span>{<span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeysAndValues</span>}}<span class="sc">;</span>
443 430 <span class="s">}</span>
444 431
445 432 <span class="c"># Set required header data keys and values hash...</span>
446 433 <span class="c">#</span>
447 <a name="SetRequiredHeaderDataKeysAndValues-"></a> 434 <span class="k">sub </span><span class="m">SetRequiredHeaderDataKeysAndValues</span> <span class="s">{</span>
448 435 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">%KeysAndValues</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
449 436
450 437 <span class="w">croak</span> <span class="q">&quot;Error: ${ClassName}-&gt;SetRequiredHeaderDataKeysAndValues: Can&#39;t set RequiredHeaderDataKeysAndValues: Not allowed...&quot;</span><span class="sc">;</span>
451 438
452 439 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
453 440 <span class="s">}</span>
454 441
455 442 <span class="c"># Get fingerprints object for current data line...</span>
456 443 <span class="c">#</span>
457 <a name="GetFingerprints-"></a> 444 <span class="k">sub </span><span class="m">GetFingerprints</span> <span class="s">{</span>
458 445 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
459 446
460 447 <span class="k">return</span> <span class="i">$This</span>-&gt;{<span class="w">FingerprintsObject</span>}<span class="sc">;</span>
461 448 <span class="s">}</span>
462 449
463 450 <span class="c"># Set fingerprints object for current data line...</span>
464 451 <span class="c">#</span>
465 <a name="SetFingerprints-"></a> 452 <span class="k">sub </span><span class="m">SetFingerprints</span> <span class="s">{</span>
466 453 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">$FingerprintsObject</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
467 454
468 455 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsObject</span>} = <span class="i">$FingerprintsObject</span><span class="sc">;</span>
469 456
470 457 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
471 458 <span class="s">}</span>
472 459
473 460 <span class="c"># Get fingerprints string for current data line...</span>
474 461 <span class="c">#</span>
475 <a name="GetFingerprintsString-"></a> 462 <span class="k">sub </span><span class="m">GetFingerprintsString</span> <span class="s">{</span>
476 463 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
477 464
478 465 <span class="k">return</span> <span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>} ? <span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>} <span class="co">:</span> <span class="q">&#39;None&#39;</span><span class="sc">;</span>
479 466 <span class="s">}</span>
480 467
481 468 <span class="c"># Set fingerprints string for current data line...</span>
482 469 <span class="c">#</span>
483 <a name="SetFingerprintsString-"></a> 470 <span class="k">sub </span><span class="m">SetFingerprintsString</span> <span class="s">{</span>
484 471 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">$FingerprintsString</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
485 472
486 473 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>} = <span class="i">$FingerprintsString</span><span class="sc">;</span>
487 474
488 475 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
489 476 <span class="s">}</span>
490 477
491 478 <span class="c"># Get partial fingerprints string for current data line...</span>
492 479 <span class="c">#</span>
493 <a name="GetPartialFingerprintsString-"></a> 480 <span class="k">sub </span><span class="m">GetPartialFingerprintsString</span> <span class="s">{</span>
494 481 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
495 482
496 483 <span class="k">return</span> <span class="i">$This</span>-&gt;{<span class="w">PartialFingerprintsString</span>} ? <span class="i">$This</span>-&gt;{<span class="w">PartialFingerprintsString</span>} <span class="co">:</span> <span class="q">&#39;None&#39;</span><span class="sc">;</span>
497 484 <span class="s">}</span>
498 485
499 486 <span class="c"># Set partial fingerprints string for current data line...</span>
500 487 <span class="c">#</span>
501 <a name="SetPartialFingerprintsString-"></a> 488 <span class="k">sub </span><span class="m">SetPartialFingerprintsString</span> <span class="s">{</span>
502 489 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">$PartialFingerprintsString</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
503 490
504 491 <span class="i">$This</span>-&gt;{<span class="w">PartialFingerprintsString</span>} = <span class="i">$PartialFingerprintsString</span><span class="sc">;</span>
505 492
506 493 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
507 494 <span class="s">}</span>
508 495
509 496 <span class="c"># Does fingerprints FP file contain valid data?</span>
510 497 <span class="c">#</span>
511 <a name="IsFingerprintsFileDataValid-"></a> 498 <span class="k">sub </span><span class="m">IsFingerprintsFileDataValid</span> <span class="s">{</span>
512 499 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
513 500
514 501 <span class="k">return</span> <span class="i">$This</span>-&gt;{<span class="w">ValidFileData</span>} ? <span class="n">1</span> <span class="co">:</span> <span class="n">0</span><span class="sc">;</span>
515 502 <span class="s">}</span>
516 503
517 504 <span class="c"># Does current data line contains valid fingerprints object data?</span>
518 505 <span class="c">#</span>
519 <a name="IsFingerprintsDataValid-"></a> 506 <span class="k">sub </span><span class="m">IsFingerprintsDataValid</span> <span class="s">{</span>
520 507 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
521 508
522 509 <span class="k">return</span> <span class="k">defined</span> <span class="i">$This</span>-&gt;{<span class="w">FingerprintsObject</span>} ? <span class="n">1</span> <span class="co">:</span> <span class="n">0</span><span class="sc">;</span>
523 510 <span class="s">}</span>
524 511
525 512 <span class="c"># Check presence of a header data key...</span>
526 513 <span class="c">#</span>
527 <a name="IsHeaderDataKeyPresent-"></a> 514 <span class="k">sub </span><span class="m">IsHeaderDataKeyPresent</span> <span class="s">{</span>
528 515 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">$Key</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
529 516 <span class="k">my</span><span class="s">(</span><span class="i">$CannonicalKey</span><span class="s">)</span><span class="sc">;</span>
530 517
531 518 <span class="i">$CannonicalKey</span> = <span class="k">lc</span> <span class="i">$Key</span><span class="sc">;</span>
532 519
533 520 <span class="k">return</span> <span class="k">exists</span> <span class="i">$This</span>-&gt;{<span class="w">CannonicalHeaderDataKeysAndValues</span>}{<span class="i">$CannonicalKey</span>} ? <span class="n">1</span> <span class="co">:</span> <span class="n">0</span><span class="sc">;</span>
534 521 <span class="s">}</span>
535 522
536 523 <span class="c"># Get value of header data key...</span>
537 524 <span class="c">#</span>
538 <a name="GetHeaderDataKeyValue-"></a> 525 <span class="k">sub </span><span class="m">GetHeaderDataKeyValue</span> <span class="s">{</span>
539 526 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">$Key</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
540 527 <span class="k">my</span><span class="s">(</span><span class="i">$CannonicalKey</span><span class="s">)</span><span class="sc">;</span>
541 528
542 529 <span class="i">$CannonicalKey</span> = <span class="k">lc</span> <span class="i">$Key</span><span class="sc">;</span>
543 530
544 531 <span class="k">return</span> <span class="k">exists</span> <span class="i">$This</span>-&gt;{<span class="w">CannonicalHeaderDataKeysAndValues</span>}{<span class="i">$CannonicalKey</span>} ? <span class="i">$This</span>-&gt;{<span class="w">CannonicalHeaderDataKeysAndValues</span>}{<span class="i">$CannonicalKey</span>} <span class="co">:</span> <span class="k">undef</span><span class="sc">;</span>
545 532 <span class="s">}</span>
546 533
547 534 <span class="c">#</span>
548 535 <span class="c"># Read next available fingerprints line, process it and generate appropriate fingerprints</span>
549 536 <span class="c"># objects...</span>
550 537 <span class="c">#</span>
551 <a name="Read-"></a> 538 <span class="k">sub </span><span class="m">Read</span> <span class="s">{</span>
552 539 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
553 540
554 541 <span class="c"># Read data line...</span>
555 542 <span class="k">if</span> <span class="s">(</span>!<span class="i">$This</span><span class="i">-&gt;_ReadDataLine</span><span class="s">(</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
556 543 <span class="k">return</span> <span class="k">undef</span><span class="sc">;</span>
557 544 <span class="s">}</span>
558 545
559 546 <span class="c"># No need to process invalid FP file with invalid data...</span>
560 547 <span class="k">if</span> <span class="s">(</span>!<span class="i">$This</span>-&gt;{<span class="w">ValidFileData</span>}<span class="s">)</span> <span class="s">{</span>
561 548 <span class="k">if</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">ValidateData</span>}<span class="s">)</span> <span class="s">{</span>
562 549 <span class="i">$This</span>-&gt;{<span class="w">NumOfLinesWithMissingData</span>} += <span class="n">1</span><span class="sc">;</span>
563 550 <span class="s">}</span>
564 551 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
565 552 <span class="s">}</span>
566 553
567 554 <span class="c"># Perform data validation...</span>
568 555 <span class="k">if</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">ValidateData</span>}<span class="s">)</span> <span class="s">{</span>
569 556 <span class="k">if</span> <span class="s">(</span>!<span class="i">$This</span><span class="i">-&gt;_ValidateReadDataLine</span><span class="s">(</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
570 557 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
571 558 <span class="s">}</span>
572 559 <span class="s">}</span>
573 560
574 561 <span class="c"># Check again to handle problematic data for non-validated data lines...</span>
575 562 <span class="k">if</span> <span class="s">(</span>!<span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>}<span class="s">)</span> <span class="s">{</span>
576 563 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
577 564 <span class="s">}</span>
578 565
579 566 <span class="c"># Generate fingeprints object...</span>
580 567 <span class="i">$This</span><span class="i">-&gt;_GenerateFingerprintsObject</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
581 568
582 569 <span class="c"># Setup fingerprints compound ID for fingerprints string...</span>
583 570 <span class="i">$This</span><span class="i">-&gt;_GenerateCompoundID</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
584 571
585 572 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
586 573 <span class="s">}</span>
587 574
588 575 <span class="c"># Read next available fingerprints line, process it and generate appropriate fingerprints</span>
589 576 <span class="c"># objects...</span>
590 577 <span class="c">#</span>
591 <a name="Next-"></a> 578 <span class="k">sub </span><span class="m">Next</span> <span class="s">{</span>
592 579 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
593 580
594 581 <span class="k">return</span> <span class="i">$This</span><span class="i">-&gt;Read</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
595 582 <span class="s">}</span>
596 583
597 584 <span class="c"># Read fingerprints data line line...</span>
598 585 <span class="c">#</span>
599 <a name="_ReadDataLine-"></a> 586 <span class="k">sub </span><span class="m">_ReadDataLine</span> <span class="s">{</span>
600 587 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
601 588
602 589 <span class="c"># Initialize data for current line...</span>
603 590 <span class="i">$This</span><span class="i">-&gt;_InitializeReadDataLine</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
604 591
605 592 <span class="k">if</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FirstDataLineIO</span>}<span class="s">)</span> <span class="s">{</span>
606 593 <span class="c"># Get first data line...</span>
607 594 <span class="i">$This</span><span class="i">-&gt;_ProcessFirstDataLineRead</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
608 595 <span class="s">}</span>
609 596 <span class="k">else</span> <span class="s">{</span>
610 597 <span class="c"># Get next data line...</span>
611 598 <span class="i">$This</span>-&gt;{<span class="w">LineNum</span>} += <span class="n">1</span><span class="sc">;</span>
612 599 <span class="i">$This</span>-&gt;{<span class="w">DataLine</span>} = <span class="i">TextUtil::GetTextLine</span><span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FileHandle</span>}<span class="s">)</span><span class="sc">;</span>
613 600 <span class="s">}</span>
614 601
615 602 <span class="c"># Is it end of file?</span>
616 603 <span class="k">if</span> <span class="s">(</span>!<span class="i">$This</span>-&gt;{<span class="w">DataLine</span>}<span class="s">)</span> <span class="s">{</span>
617 604 <span class="k">return</span> <span class="n">0</span><span class="sc">;</span>
618 605 <span class="s">}</span>
619 606
620 607 <span class="c"># Process data line to retrieve compound ID and fingerprints string information...</span>
621 608 <span class="i">$This</span><span class="i">-&gt;_ProcessDataLineRead</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
622 609
623 610 <span class="k">return</span> <span class="n">1</span><span class="sc">;</span>
624 611 <span class="s">}</span>
625 612
626 613 <span class="c"># Process data line to retrieve compound ID and fingerprints string information...</span>
627 614 <span class="c">#</span>
628 <a name="_ProcessDataLineRead-"></a> 615 <span class="k">sub </span><span class="m">_ProcessDataLineRead</span> <span class="s">{</span>
629 616 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
630 617 <span class="k">my</span><span class="s">(</span><span class="i">$CompoundID</span><span class="cm">,</span> <span class="i">$PartialFingerprintsString</span><span class="s">)</span><span class="sc">;</span>
631 618
632 619 <span class="s">(</span><span class="i">$CompoundID</span><span class="cm">,</span> <span class="i">$PartialFingerprintsString</span><span class="s">)</span> = <span class="i">$This</span>-&gt;{<span class="w">DataLine</span>} =~ <span class="q">/^(.*?)[ ]+(.*?)$/</span><span class="sc">;</span>
633 620
634 621 <span class="k">if</span> <span class="s">(</span>!<span class="s">(</span><span class="k">defined</span><span class="s">(</span><span class="i">$CompoundID</span><span class="s">)</span> &amp;&amp; <span class="k">defined</span><span class="s">(</span><span class="i">$PartialFingerprintsString</span><span class="s">)</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
635 622 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
636 623 <span class="s">}</span>
637 624
638 625 <span class="i">$This</span>-&gt;{<span class="w">CompoundID</span>} = <span class="i">$CompoundID</span><span class="sc">;</span>
639 626 <span class="i">$This</span>-&gt;{<span class="w">PartialFingerprintsString</span>} = <span class="i">$PartialFingerprintsString</span><span class="sc">;</span>
640 627
641 628 <span class="c"># Set up fingerprints string...</span>
642 629 <span class="i">$This</span><span class="i">-&gt;_GenerateFingerprintsStringFromPartialFingerprintsString</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
643 630
644 631 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
645 632 <span class="s">}</span>
646 633
647 634 <span class="c"># Initialize data line for reading...</span>
648 635 <span class="c">#</span>
649 <a name="_InitializeReadDataLine-"></a> 636 <span class="k">sub </span><span class="m">_InitializeReadDataLine</span> <span class="s">{</span>
650 637 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
651 638
652 639 <span class="i">$This</span>-&gt;{<span class="w">CompoundID</span>} = <span class="k">undef</span><span class="sc">;</span>
653 640 <span class="i">$This</span>-&gt;{<span class="w">DataLine</span>} = <span class="k">undef</span><span class="sc">;</span>
654 641
655 642 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsObject</span>} = <span class="k">undef</span><span class="sc">;</span>
656 643
657 644 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>} = <span class="k">undef</span><span class="sc">;</span>
658 645 <span class="i">$This</span>-&gt;{<span class="w">PartialFingerprintsString</span>} = <span class="k">undef</span><span class="sc">;</span>
659 646
660 647 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
661 648 <span class="s">}</span>
662 649
663 650 <span class="c"># Validate fingerprints string data line...</span>
664 651 <span class="c">#</span>
665 <a name="_ValidateReadDataLine-"></a> 652 <span class="k">sub </span><span class="m">_ValidateReadDataLine</span> <span class="s">{</span>
666 653 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
667 654
668 655 <span class="c"># Check for missing data...</span>
669 656 <span class="k">if</span> <span class="s">(</span>!<span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">CompoundID</span>} &amp;&amp; <span class="i">$This</span>-&gt;{<span class="w">PartialFingerprintsString</span>}<span class="s">)</span><span class="s">)</span> <span class="s">{</span>
670 657 <span class="c"># Missing data...</span>
671 658 <span class="i">$This</span>-&gt;{<span class="w">NumOfLinesWithMissingData</span>} += <span class="n">1</span><span class="sc">;</span>
672 659 <span class="k">if</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">DetailLevel</span>} &gt;= <span class="n">3</span><span class="s">)</span> <span class="s">{</span>
673 660 <span class="w">carp</span> <span class="q">&quot;Warning: ${ClassName}-&gt;_ValidateReadDataLine: Data line number $This-&gt;{LineNum} contains no fingerprints data: $This-&gt;{DataLine}...&quot;</span><span class="sc">;</span>
674 661 <span class="s">}</span>
675 662 <span class="k">elsif</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">DetailLevel</span>} &gt;= <span class="n">2</span><span class="s">)</span> <span class="s">{</span>
676 663 <span class="w">carp</span> <span class="q">&quot;Warning: ${ClassName}-&gt;_ValidateReadDataLine: Data line number $This-&gt;{LineNum} contains no fingerprints data...&quot;</span><span class="sc">;</span>
677 664 <span class="s">}</span>
678 665 <span class="k">return</span> <span class="n">0</span><span class="sc">;</span>
679 666 <span class="s">}</span>
680 667
681 668 <span class="c"># Check for invalid data...</span>
682 669 <span class="k">my</span><span class="s">(</span><span class="i">$InvalidFingerprintsData</span><span class="s">)</span><span class="sc">;</span>
683 670
684 671 <span class="i">$InvalidFingerprintsData</span> = <span class="n">0</span><span class="sc">;</span>
685 672 <span class="k">if</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>}<span class="s">)</span> <span class="s">{</span>
686 673 <span class="i">$InvalidFingerprintsData</span> = <span class="i">Fingerprints::FingerprintsStringUtil::AreFingerprintsStringValuesValid</span><span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>}<span class="s">)</span> ? <span class="n">0</span> <span class="co">:</span> <span class="n">1</span><span class="sc">;</span>
687 674 <span class="s">}</span>
688 675 <span class="k">else</span> <span class="s">{</span>
689 676 <span class="i">$InvalidFingerprintsData</span> = <span class="n">1</span><span class="sc">;</span>
690 677 <span class="s">}</span>
691 678
692 679 <span class="k">if</span> <span class="s">(</span><span class="i">$InvalidFingerprintsData</span><span class="s">)</span> <span class="s">{</span>
693 680 <span class="i">$This</span>-&gt;{<span class="w">NumOfLinesWithInvalidData</span>} += <span class="n">1</span><span class="sc">;</span>
694 681 <span class="k">if</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">DetailLevel</span>} &gt;= <span class="n">3</span><span class="s">)</span> <span class="s">{</span>
695 682 <span class="w">carp</span> <span class="q">&quot;Warning: ${ClassName}-&gt;_ValidateReadDataLine: Data line number $This-&gt;{LineNum} contains invalid fingerprints data: $This-&gt;{DataLine}...&quot;</span><span class="sc">;</span>
696 683 <span class="s">}</span>
697 684 <span class="k">elsif</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">DetailLevel</span>} &gt;= <span class="n">2</span><span class="s">)</span> <span class="s">{</span>
698 685 <span class="w">carp</span> <span class="q">&quot;Warning: ${ClassName}-&gt;_ValidateReadDataLine: Data line number $This-&gt;{LineNum} contains invalid fingerprints data...&quot;</span><span class="sc">;</span>
699 686 <span class="s">}</span>
700 687 <span class="k">return</span> <span class="n">0</span><span class="sc">;</span>
701 688 <span class="s">}</span>
702 689
703 690 <span class="k">return</span> <span class="n">1</span><span class="sc">;</span>
704 691 <span class="s">}</span>
705 692
706 693 <span class="c"># Setup fingerprints compound ID for fingerprints string...</span>
707 <a name="_GenerateCompoundID-"></a> 694 <span class="k">sub </span><span class="m">_GenerateCompoundID</span> <span class="s">{</span>
708 695 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
709 696
710 697 <span class="c"># Set fingerprints ID...</span>
711 698 <span class="k">if</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsObject</span>}<span class="s">)</span> <span class="s">{</span>
712 699 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsObject</span>}<span class="i">-&gt;SetID</span><span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">CompoundID</span>}<span class="s">)</span><span class="sc">;</span>
713 700 <span class="s">}</span>
714 701
715 702 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
716 703 <span class="s">}</span>
717 704
718 705 <span class="c"># Process first read...</span>
719 706 <span class="c">#</span>
720 <a name="_ProcessFirstDataLineRead-"></a> 707 <span class="k">sub </span><span class="m">_ProcessFirstDataLineRead</span> <span class="s">{</span>
721 708 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
722 709 <span class="k">my</span><span class="s">(</span><span class="i">$Line</span><span class="s">)</span><span class="sc">;</span>
723 710
724 711 <span class="i">$This</span>-&gt;{<span class="w">FirstDataLineIO</span>} = <span class="n">0</span><span class="sc">;</span>
725 712
726 713 <span class="c"># Skip over header data lines and collect first data line...</span>
727 714
728 715 <span class="j">LINE:</span> <span class="k">while</span> <span class="s">(</span><span class="i">$Line</span> = <span class="i">TextUtil::GetTextLine</span><span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FileHandle</span>}<span class="s">)</span><span class="s">)</span> <span class="s">{</span>
729 716 <span class="i">$This</span>-&gt;{<span class="w">LineNum</span>} += <span class="n">1</span><span class="sc">;</span>
730 717
731 718 <span class="c"># Is it a header data line?</span>
732 719 <span class="k">if</span> <span class="s">(</span><span class="i">$Line</span> =~ <span class="q">/^#/</span><span class="s">)</span> <span class="s">{</span>
733 720 <span class="k">next</span> <span class="j">LINE</span><span class="sc">;</span>
734 721 <span class="s">}</span>
735 722 <span class="i">$This</span>-&gt;{<span class="w">DataLine</span>} = <span class="i">$Line</span><span class="sc">;</span>
736 723 <span class="k">last</span> <span class="j">LINE</span><span class="sc">;</span>
737 724 <span class="s">}</span>
738 725
739 726 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
740 727 <span class="s">}</span>
741 728
742 729 <span class="c"># Get ready for reading fingerprints FP file...</span>
743 730 <span class="c">#</span>
744 <a name="_PrepareForReadingFingerprintsFPFileData-"></a> 731 <span class="k">sub </span><span class="m">_PrepareForReadingFingerprintsFPFileData</span> <span class="s">{</span>
745 732 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
746 733
747 734 <span class="c"># Retrieve FP file data headers information....</span>
748 735 <span class="i">$This</span><span class="i">-&gt;_RetrieveFPFileDataHeaders</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
749 736
750 737 <span class="c"># Validate header data keys and values information...</span>
751 738 <span class="i">$This</span><span class="i">-&gt;_ValidateReadHeaderDataKeysAndValues</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
752 739
753 740 <span class="c"># Validate fingeprints string mode information...</span>
754 741 <span class="k">if</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">ValidRequiredHeaderDataKeys</span>}<span class="s">)</span> <span class="s">{</span>
755 742 <span class="i">$This</span><span class="i">-&gt;_ValidateReadFingerprintsStringMode</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
756 743 <span class="s">}</span>
757 744
758 745 <span class="c"># Set status of FP file data...</span>
759 746 <span class="i">$This</span>-&gt;{<span class="w">ValidFileData</span>} = <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">ValidRequiredHeaderDataKeys</span>} &amp;&amp; <span class="i">$This</span>-&gt;{<span class="w">ValidFingerprintsStringMode</span>}<span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span> <span class="n">0</span><span class="sc">;</span>
760 747
761 748 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
762 749 <span class="s">}</span>
763 750
764 751 <span class="c"># Retrieve information about fingerprints date header in FP file...</span>
765 752 <span class="c">#</span>
766 <a name="_RetrieveFPFileDataHeaders-"></a> 753 <span class="k">sub </span><span class="m">_RetrieveFPFileDataHeaders</span> <span class="s">{</span>
767 754 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
768 755 <span class="k">my</span><span class="s">(</span><span class="i">$FPFile</span><span class="cm">,</span> <span class="i">$Line</span><span class="cm">,</span> <span class="i">$Index</span><span class="cm">,</span> <span class="i">$KeyValuePair</span><span class="cm">,</span> <span class="i">$Key</span><span class="cm">,</span> <span class="i">$Value</span><span class="cm">,</span> <span class="i">$KeyValueDelimiter</span><span class="cm">,</span> <span class="i">$KeyValuePairDelimiter</span><span class="cm">,</span> <span class="i">@LineKeyValuePairs</span><span class="s">)</span><span class="sc">;</span>
769 756
770 757 <span class="i">$FPFile</span> = <span class="i">$This</span>-&gt;{<span class="w">Name</span>}<span class="sc">;</span>
771 758
772 759 <span class="k">if</span> <span class="s">(</span>!<span class="s">(</span><span class="k">-e</span> <span class="i">$FPFile</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
773 760 <span class="w">croak</span> <span class="q">&quot;Error: ${ClassName}-&gt;_RetrieveFPFileDataHeaders: File, $FPFile, doesn&#39;t exist...&quot;</span><span class="sc">;</span>
774 761 <span class="s">}</span>
775 762
776 763 <span class="k">if</span> <span class="s">(</span>!<span class="k">open</span> <span class="w">FPFILE</span><span class="cm">,</span> <span class="q">&quot;$FPFile&quot;</span><span class="s">)</span> <span class="s">{</span>
777 764 <span class="w">croak</span> <span class="q">&quot;Error: ${ClassName}-&gt;_RetrieveFPFileDataHeaders: Couldn&#39;t open input FP file $FPFile: $! ...&quot;</span><span class="sc">;</span>
778 765 <span class="s">}</span>
779 766
780 767 <span class="c"># Process header key/value pair data...</span>
781 768 <span class="c">#</span>
782 769 <span class="i">$KeyValueDelimiter</span> = <span class="q">&#39;=&#39;</span><span class="sc">;</span>
783 770 <span class="i">$KeyValuePairDelimiter</span> = <span class="q">&#39;;&#39;</span><span class="sc">;</span>
784 771
785 772 <span class="i">@</span>{<span class="i">$This</span>-&gt;{<span class="w">HeaderDataKeys</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
786 773 <span class="i">%</span>{<span class="i">$This</span>-&gt;{<span class="w">HeaderDataKeysAndValues</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
787 774 <span class="i">%</span>{<span class="i">$This</span>-&gt;{<span class="w">CannonicalHeaderDataKeysAndValues</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
788 775
789 776 <span class="j">LINE:</span> <span class="k">while</span> <span class="s">(</span><span class="i">$Line</span> = <span class="i">TextUtil::GetTextLine</span><span class="s">(</span>\<span class="i">*FPFILE</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
790 777 <span class="c"># Is it a key/value pairs line?</span>
791 778 <span class="k">if</span> <span class="s">(</span><span class="i">$Line</span> !~ <span class="q">/^#/</span><span class="s">)</span> <span class="s">{</span>
792 779 <span class="k">last</span> <span class="j">LINE</span><span class="sc">;</span>
793 780 <span class="s">}</span>
794 781
795 782 <span class="c"># Take out starting hash mark before processing key/value pairs...</span>
796 783 <span class="i">$Line</span> =~ <span class="q">s/^#//</span><span class="sc">;</span>
797 784 <span class="k">if</span> <span class="s">(</span><span class="i">TextUtil::IsEmpty</span><span class="s">(</span><span class="i">$Line</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
798 785 <span class="k">next</span> <span class="j">LINE</span><span class="sc">;</span>
799 786 <span class="s">}</span>
800 787
801 788 <span class="i">@LineKeyValuePairs</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
802 789
803 790 <span class="k">for</span> <span class="i">$KeyValuePair</span> <span class="s">(</span><span class="k">split</span> <span class="q">&quot;$KeyValuePairDelimiter&quot;</span><span class="cm">,</span> <span class="i">$Line</span><span class="s">)</span> <span class="s">{</span>
804 791 <span class="s">(</span><span class="i">$Key</span><span class="cm">,</span> <span class="i">$Value</span><span class="s">)</span> = <span class="k">split</span> <span class="q">&quot;$KeyValueDelimiter&quot;</span><span class="cm">,</span> <span class="i">$KeyValuePair</span><span class="sc">;</span>
805 792
806 793 <span class="i">$Key</span> = <span class="k">defined</span><span class="s">(</span><span class="i">$Key</span><span class="s">)</span> ? <span class="i">TextUtil::RemoveLeadingAndTrailingWhiteSpaces</span><span class="s">(</span><span class="i">$Key</span><span class="s">)</span> <span class="co">:</span> <span class="q">&#39;&#39;</span><span class="sc">;</span>
807 794 <span class="i">$Value</span> = <span class="k">defined</span><span class="s">(</span><span class="i">$Value</span><span class="s">)</span> ? <span class="i">TextUtil::RemoveLeadingAndTrailingWhiteSpaces</span><span class="s">(</span><span class="i">$Value</span><span class="s">)</span> <span class="co">:</span> <span class="q">&#39;&#39;</span><span class="sc">;</span>
808 795
809 796 <span class="k">if</span> <span class="s">(</span><span class="i">TextUtil::IsEmpty</span><span class="s">(</span><span class="i">$Key</span><span class="s">)</span> || <span class="i">TextUtil::IsEmpty</span><span class="s">(</span><span class="i">$Value</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
810 797 <span class="w">carp</span> <span class="q">&quot;Warning: ${ClassName}-&gt;_RetrieveFPFileDataHeaders: Data header line containing \&quot;Key = Value\&quot; pairs is not valid: It must contain even number of \&quot;Key = Value\&quot; pairs with valid values. Ignoring data header line: \&quot;$Line\&quot;...&quot;</span><span class="sc">;</span>
811 798 <span class="k">next</span> <span class="j">LINE</span><span class="sc">;</span>
812 799 <span class="s">}</span>
813 800 <span class="k">push</span> <span class="i">@</span>{<span class="i">$This</span>-&gt;{<span class="w">HeaderDataKeys</span>}}<span class="cm">,</span> <span class="i">$Key</span><span class="sc">;</span>
814 801 <span class="k">push</span> <span class="i">@LineKeyValuePairs</span><span class="cm">,</span> <span class="s">(</span><span class="i">$Key</span><span class="cm">,</span> <span class="i">$Value</span><span class="s">)</span><span class="sc">;</span>
815 802 <span class="s">}</span>
816 803
817 804 <span class="k">for</span> <span class="s">(</span><span class="i">$Index</span> = <span class="n">0</span><span class="sc">;</span> <span class="i">$Index</span> &lt; <span class="i">$#LineKeyValuePairs</span><span class="sc">;</span> <span class="i">$Index</span> += <span class="n">2</span><span class="s">)</span> <span class="s">{</span>
818 805 <span class="i">$Key</span> = <span class="i">$LineKeyValuePairs</span>[<span class="i">$Index</span>]<span class="sc">;</span> <span class="i">$Value</span> = <span class="i">$LineKeyValuePairs</span>[<span class="i">$Index</span> + <span class="n">1</span>]<span class="sc">;</span>
819 806
820 807 <span class="i">$This</span>-&gt;{<span class="w">HeaderDataKeysAndValues</span>}{<span class="i">$Key</span>} = <span class="i">$Value</span><span class="sc">;</span>
821 808 <span class="i">$This</span>-&gt;{<span class="w">CannonicalHeaderDataKeysAndValues</span>}{<span class="k">lc</span><span class="s">(</span><span class="i">$Key</span><span class="s">)</span>} = <span class="i">$Value</span><span class="sc">;</span>
822 809 <span class="s">}</span>
823 810 <span class="s">}</span>
824 811 <span class="k">close</span> <span class="w">FPFILE</span><span class="sc">;</span>
825 812
826 813 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
827 814 <span class="s">}</span>
828 815
829 816 <span class="c"># Validate header data and keys...</span>
830 817 <span class="c">#</span>
831 <a name="_ValidateReadHeaderDataKeysAndValues-"></a> 818 <span class="k">sub </span><span class="m">_ValidateReadHeaderDataKeysAndValues</span> <span class="s">{</span>
832 819 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
833 820 <span class="k">my</span><span class="s">(</span><span class="i">$FingerprintsStringType</span><span class="cm">,</span> <span class="i">$Key</span><span class="cm">,</span> <span class="i">$Value</span><span class="cm">,</span> <span class="i">@RequiredHeaderDataKeys</span><span class="s">)</span><span class="sc">;</span>
834 821
835 822 <span class="i">$This</span>-&gt;{<span class="w">ValidRequiredHeaderDataKeys</span>} = <span class="n">0</span><span class="sc">;</span>
836 823 <span class="i">@</span>{<span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeys</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
837 824
838 825 <span class="c"># Is FingerprintsStringType key is present?</span>
839 826 <span class="k">if</span> <span class="s">(</span>!<span class="i">$This</span><span class="i">-&gt;IsHeaderDataKeyPresent</span><span class="s">(</span><span class="q">&#39;FingerprintsStringType&#39;</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
840 827 <span class="w">carp</span> <span class="q">&quot;carp: ${ClassName}-&gt;_ValidateReadHeaderDataKeysAndValues: FingerprintsStringType data header key is missing in fingerprints file...&quot;</span><span class="sc">;</span>
841 828 <span class="k">return</span> <span class="n">0</span><span class="sc">;</span>
842 829 <span class="s">}</span>
843 830 <span class="i">$FingerprintsStringType</span> = <span class="i">$This</span><span class="i">-&gt;GetHeaderDataKeyValue</span><span class="s">(</span><span class="q">&#39;FingerprintsStringType&#39;</span><span class="s">)</span><span class="sc">;</span>
844 831
845 832 <span class="c"># Are all required data header keys present?</span>
846 833 <span class="c">#</span>
847 834 <span class="i">@RequiredHeaderDataKeys</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
848 835
849 836 <span class="k">if</span> <span class="s">(</span><span class="i">$FingerprintsStringType</span> =~ <span class="q">/^(FingerprintsBitVector|FingerprintsVector)$/i</span><span class="s">)</span> <span class="s">{</span>
850 837 <span class="k">push</span> <span class="i">@RequiredHeaderDataKeys</span><span class="cm">,</span> <span class="i">$This</span><span class="i">-&gt;_GetRequiredHeaderDataKeys</span><span class="s">(</span><span class="i">$FingerprintsStringType</span><span class="s">)</span><span class="sc">;</span>
851 838 <span class="s">}</span>
852 839 <span class="k">else</span> <span class="s">{</span>
853 840 <span class="w">carp</span> <span class="q">&quot;Warning: ${ClassName}-&gt;_ValidateReadHeaderDataKeysAndValues: FingerprintsStringType data header key value, $FingerprintsStringType, is not valid. SUpported values: FingerprintsBitVector or FingerprintsVector...&quot;</span><span class="sc">;</span>
854 841 <span class="k">return</span> <span class="n">0</span><span class="sc">;</span>
855 842 <span class="s">}</span>
856 843
857 844 <span class="k">for</span> <span class="i">$Key</span> <span class="s">(</span><span class="i">@RequiredHeaderDataKeys</span><span class="s">)</span> <span class="s">{</span>
858 845 <span class="k">if</span> <span class="s">(</span>!<span class="i">$This</span><span class="i">-&gt;IsHeaderDataKeyPresent</span><span class="s">(</span><span class="i">$Key</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
859 846 <span class="w">croak</span> <span class="q">&quot;Error: ${ClassName}-&gt;_ValidateReadHeaderDataKeysAndValues: Requires data header key, $Key, is missing in fingerprints file...&quot;</span><span class="sc">;</span>
860 847 <span class="s">}</span>
861 848 <span class="s">}</span>
862 849
863 850 <span class="k">push</span> <span class="i">@</span>{<span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeys</span>}}<span class="cm">,</span> <span class="i">@RequiredHeaderDataKeys</span><span class="sc">;</span>
864 851
865 852 <span class="c"># Are all required data header key values valid?</span>
866 853 <span class="c">#</span>
867 854 <span class="k">if</span> <span class="s">(</span>!<span class="i">$This</span><span class="i">-&gt;_ValidateRequiredHeaderDataKeyValues</span><span class="s">(</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
868 855 <span class="k">return</span> <span class="n">0</span><span class="sc">;</span>
869 856 <span class="s">}</span>
870 857
871 858 <span class="c"># Process required header key values...</span>
872 859 <span class="c">#</span>
873 860 <span class="i">$This</span><span class="i">-&gt;_ProcessRequiredHeaderDataKeyValues</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
874 861
875 862 <span class="i">$This</span>-&gt;{<span class="w">ValidRequiredHeaderDataKeys</span>} = <span class="n">1</span><span class="sc">;</span>
876 863
877 864 <span class="k">return</span> <span class="n">1</span><span class="sc">;</span>
878 865 <span class="s">}</span>
879 866
880 867 <span class="c"># Validate data header key values....</span>
881 868 <span class="c">#</span>
882 <a name="_ValidateRequiredHeaderDataKeyValues-"></a> 869 <span class="k">sub </span><span class="m">_ValidateRequiredHeaderDataKeyValues</span> <span class="s">{</span>
883 870 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
884 871 <span class="k">my</span><span class="s">(</span><span class="i">$Key</span><span class="cm">,</span> <span class="i">$Value</span><span class="s">)</span><span class="sc">;</span>
885 872
886 873 <span class="k">for</span> <span class="i">$Key</span> <span class="s">(</span><span class="i">@</span>{<span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeys</span>}}<span class="s">)</span> <span class="s">{</span>
887 874 <span class="i">$Value</span> = <span class="i">$This</span><span class="i">-&gt;GetHeaderDataKeyValue</span><span class="s">(</span><span class="i">$Key</span><span class="s">)</span><span class="sc">;</span>
888 875 <span class="j">KEY:</span> <span class="s">{</span>
889 876 <span class="k">if</span> <span class="s">(</span><span class="i">$Key</span> =~ <span class="q">/^FingerprintsStringType$/i</span><span class="s">)</span> <span class="s">{</span>
890 877 <span class="k">if</span> <span class="s">(</span><span class="i">$Value</span> !~ <span class="q">/^(FingerprintsBitVector|FingerprintsVector)$/i</span><span class="s">)</span> <span class="s">{</span>
891 878 <span class="w">carp</span> <span class="q">&quot;Warning: ${ClassName}-&gt;_ValidateRequiredHeaderDataKeyValues: Required $Key data header key value, $Value, is not valid. Supported values: FingerprintsBitVector or FingerprintsVector...&quot;</span><span class="sc">;</span>
892 879 <span class="k">return</span> <span class="n">0</span><span class="sc">;</span>
893 880 <span class="s">}</span>
894 881 <span class="k">last</span> <span class="j">KEY</span><span class="sc">;</span>
895 882 <span class="s">}</span>
896 883 <span class="k">if</span> <span class="s">(</span><span class="i">$Key</span> =~ <span class="q">/^Size$/i</span><span class="s">)</span> <span class="s">{</span>
897 884 <span class="k">if</span> <span class="s">(</span>!<span class="i">TextUtil::IsPositiveInteger</span><span class="s">(</span><span class="i">$Value</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
898 885 <span class="w">carp</span> <span class="q">&quot;Warning: ${ClassName}-&gt;_ValidateRequiredHeaderDataKeyValues: Required $Key data header key value, $Value, is not valid. Supported values: &gt; 0...&quot;</span><span class="sc">;</span>
899 886 <span class="k">return</span> <span class="n">0</span><span class="sc">;</span>
900 887 <span class="s">}</span>
901 888 <span class="k">last</span> <span class="j">KEY</span><span class="sc">;</span>
902 889 <span class="s">}</span>
903 890 <span class="k">if</span> <span class="s">(</span><span class="i">$Key</span> =~ <span class="q">/^BitStringFormat$/i</span><span class="s">)</span> <span class="s">{</span>
904 891 <span class="k">if</span> <span class="s">(</span><span class="i">$Value</span> !~ <span class="q">/^(BinaryString|HexadecimalString)$/i</span><span class="s">)</span> <span class="s">{</span>
905 892 <span class="w">carp</span> <span class="q">&quot;Warning: ${ClassName}-&gt;_ValidateRequiredHeaderDataKeyValues: Required $Key data header key value, $Value, is not valid. Supported values: BinaryString or HexadecimalString ...&quot;</span><span class="sc">;</span>
906 893 <span class="k">return</span> <span class="n">0</span><span class="sc">;</span>
907 894 <span class="s">}</span>
908 895 <span class="k">last</span> <span class="j">KEY</span><span class="sc">;</span>
909 896 <span class="s">}</span>
910 897 <span class="k">if</span> <span class="s">(</span><span class="i">$Key</span> =~ <span class="q">/^BitsOrder$/i</span><span class="s">)</span> <span class="s">{</span>
911 898 <span class="k">if</span> <span class="s">(</span><span class="i">$Value</span> !~ <span class="q">/^(Ascending|Descending)$/i</span><span class="s">)</span> <span class="s">{</span>
912 899 <span class="w">carp</span> <span class="q">&quot;Warning: ${ClassName}-&gt;_ValidateRequiredHeaderDataKeyValues: Required $Key data header key value, $Value, is not valid. Supported values: Ascending or Descending...&quot;</span><span class="sc">;</span>
913 900 <span class="k">return</span> <span class="n">0</span><span class="sc">;</span>
914 901 <span class="s">}</span>
915 902 <span class="k">last</span> <span class="j">KEY</span><span class="sc">;</span>
916 903 <span class="s">}</span>
917 904 <span class="k">if</span> <span class="s">(</span><span class="i">$Key</span> =~ <span class="q">/^VectorStringFormat$/i</span><span class="s">)</span> <span class="s">{</span>
918 905 <span class="k">if</span> <span class="s">(</span><span class="i">$Value</span> !~ <span class="q">/^(IDsAndValuesString|IDsAndValuesPairsString|ValuesAndIDsString|ValuesAndIDsPairsString|ValuesString)$/i</span><span class="s">)</span> <span class="s">{</span>
919 906 <span class="w">carp</span> <span class="q">&quot;Warning: ${ClassName}-&gt;_ValidateRequiredHeaderDataKeyValues: Required $Key data header key value, $Value, is not valid. Supported values: IDsAndValuesString, IDsAndValuesPairsString, ValuesAndIDsString, ValuesAndIDsPairsString, or ValuesString ...&quot;</span><span class="sc">;</span>
920 907 <span class="k">return</span> <span class="n">0</span><span class="sc">;</span>
921 908 <span class="s">}</span>
922 909 <span class="k">last</span> <span class="j">KEY</span><span class="sc">;</span>
923 910 <span class="s">}</span>
924 911 <span class="k">if</span> <span class="s">(</span><span class="i">$Key</span> =~ <span class="q">/^VectorValuesType$/i</span><span class="s">)</span> <span class="s">{</span>
925 912 <span class="k">if</span> <span class="s">(</span><span class="i">$Value</span> !~ <span class="q">/^(OrderedNumericalValues|NumericalValues|AlphaNumericalValues)$/i</span><span class="s">)</span> <span class="s">{</span>
926 913 <span class="w">carp</span> <span class="q">&quot;Warning: ${ClassName}-&gt;_ValidateRequiredHeaderDataKeyValues: Required $Key data header key value, $Value, is not valid. Supported values: OrderedNumericalValues, NumericalValues or AlphaNumericalValues...&quot;</span><span class="sc">;</span>
927 914 <span class="k">return</span> <span class="n">0</span><span class="sc">;</span>
928 915 <span class="s">}</span>
929 916 <span class="k">last</span> <span class="j">KEY</span><span class="sc">;</span>
930 917 <span class="s">}</span>
931 918 <span class="k">if</span> <span class="s">(</span><span class="i">$Key</span> =~ <span class="q">/^Description$/i</span><span class="s">)</span> <span class="s">{</span>
932 919 <span class="k">if</span> <span class="s">(</span><span class="i">TextUtil::IsEmpty</span><span class="s">(</span><span class="i">$Value</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
933 920 <span class="w">carp</span> <span class="q">&quot;Warning: ${ClassName}-&gt;_ValidateRequiredHeaderDataKeyValues: Required $Key data header key value is not valid. Supported value: A no-empty text string...&quot;</span><span class="sc">;</span>
934 921 <span class="k">return</span> <span class="n">0</span><span class="sc">;</span>
935 922 <span class="s">}</span>
936 923 <span class="k">last</span> <span class="j">KEY</span><span class="sc">;</span>
937 924 <span class="s">}</span>
938 925 <span class="w">carp</span> <span class="q">&quot;Warning: ${ClassName}-&gt;_ValidateRequiredHeaderDataKeyValues: Required $Key data header key is not not supported...&quot;</span><span class="sc">;</span>
939 926 <span class="k">return</span> <span class="n">0</span><span class="sc">;</span>
940 927 <span class="s">}</span>
941 928 <span class="s">}</span>
942 929
943 930 <span class="k">return</span> <span class="n">1</span><span class="sc">;</span>
944 931 <span class="s">}</span>
945 932
946 933 <span class="c"># Process required header key valeues for access during complete fingerprints</span>
947 934 <span class="c"># string generation from a partial fingerprints string specified on fingerprints</span>
948 935 <span class="c"># line...</span>
949 936 <span class="c">#</span>
950 <a name="_ProcessRequiredHeaderDataKeyValues-"></a> 937 <span class="k">sub </span><span class="m">_ProcessRequiredHeaderDataKeyValues</span> <span class="s">{</span>
951 938 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
952 939 <span class="k">my</span><span class="s">(</span><span class="i">$Key</span><span class="cm">,</span> <span class="i">$Value</span><span class="cm">,</span> <span class="i">@Keys</span><span class="s">)</span><span class="sc">;</span>
953 940
954 941 <span class="i">%</span>{<span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeysAndValues</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
955 942
956 943 <span class="k">for</span> <span class="i">$Key</span> <span class="s">(</span><span class="i">@</span>{<span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeys</span>}}<span class="s">)</span> <span class="s">{</span>
957 944 <span class="i">$Value</span> = <span class="i">$This</span><span class="i">-&gt;GetHeaderDataKeyValue</span><span class="s">(</span><span class="i">$Key</span><span class="s">)</span><span class="sc">;</span>
958 945 <span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeysAndValues</span>}{<span class="i">$Key</span>} = <span class="i">$Value</span><span class="sc">;</span>
959 946 <span class="s">}</span>
960 947
961 948 <span class="c"># Setup prefixes for generating fingerprints strings...</span>
962 949 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsBitVectorStringPrefix</span>} = <span class="q">&#39;&#39;</span><span class="sc">;</span>
963 950 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsVectorStringPrefix1</span>} = <span class="q">&#39;&#39;</span><span class="sc">;</span>
964 951 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsVectorStringPrefix2</span>} = <span class="q">&#39;&#39;</span><span class="sc">;</span>
965 952
966 953 <span class="k">if</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeysAndValues</span>}{<span class="w">FingerprintsStringType</span>} =~ <span class="q">/^FingerprintsBitVector$/i</span><span class="s">)</span> <span class="s">{</span>
967 954 <span class="i">@Keys</span> = <span class="q">qw(FingerprintsStringType Description Size BitStringFormat BitsOrder)</span><span class="sc">;</span>
968 955 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsBitVectorStringPrefix</span>} = <span class="i">$This</span><span class="i">-&gt;_GenerateFingerprintsPrefixUsingKeys</span><span class="s">(</span><span class="i">@Keys</span><span class="s">)</span><span class="sc">;</span>
969 956 <span class="s">}</span>
970 957 <span class="k">elsif</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeysAndValues</span>}{<span class="w">FingerprintsStringType</span>} =~ <span class="q">/^FingerprintsVector$/i</span><span class="s">)</span> <span class="s">{</span>
971 958 <span class="i">@Keys</span> = <span class="q">qw(FingerprintsStringType Description)</span><span class="sc">;</span>
972 959 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsVectorStringPrefix1</span>} = <span class="i">$This</span><span class="i">-&gt;_GenerateFingerprintsPrefixUsingKeys</span><span class="s">(</span><span class="i">@Keys</span><span class="s">)</span><span class="sc">;</span>
973 960
974 961 <span class="i">@Keys</span> = <span class="q">qw(VectorValuesType VectorStringFormat)</span><span class="sc">;</span>
975 962 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsVectorStringPrefix2</span>} = <span class="i">$This</span><span class="i">-&gt;_GenerateFingerprintsPrefixUsingKeys</span><span class="s">(</span><span class="i">@Keys</span><span class="s">)</span><span class="sc">;</span>
976 963 <span class="s">}</span>
977 964
978 965 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
979 966 <span class="s">}</span>
980 967
981 968 <span class="c"># Generate fingerprints prefix using header keys data...</span>
982 969 <span class="c">#</span>
983 <a name="_GenerateFingerprintsPrefixUsingKeys-"></a> 970 <span class="k">sub </span><span class="m">_GenerateFingerprintsPrefixUsingKeys</span> <span class="s">{</span>
984 971 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">@Keys</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
985 972 <span class="k">my</span><span class="s">(</span><span class="i">$Delimiter</span><span class="cm">,</span> <span class="i">$Key</span><span class="cm">,</span> <span class="i">@Values</span><span class="s">)</span><span class="sc">;</span>
986 973
987 974 <span class="i">$Delimiter</span> = <span class="i">Fingerprints::FingerprintsStringUtil::GetFingeprintsStringDelimiter</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
988 975
989 976 <span class="i">@Values</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
990 977 <span class="k">for</span> <span class="i">$Key</span> <span class="s">(</span><span class="i">@Keys</span><span class="s">)</span> <span class="s">{</span>
991 978 <span class="k">push</span> <span class="i">@Values</span><span class="cm">,</span> <span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeysAndValues</span>}{<span class="i">$Key</span>}<span class="sc">;</span>
992 979 <span class="s">}</span>
993 980
994 981 <span class="k">return</span> <span class="k">join</span><span class="s">(</span><span class="i">$Delimiter</span><span class="cm">,</span> <span class="i">@Values</span><span class="s">)</span>
995 982 <span class="s">}</span>
996 983
997 984 <span class="c"># Get required header data keys...</span>
998 985 <span class="c">#</span>
999 <a name="_GetRequiredHeaderDataKeys-"></a> 986 <span class="k">sub </span><span class="m">_GetRequiredHeaderDataKeys</span> <span class="s">{</span>
1000 987 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">$FingerprintsStringType</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1001 988 <span class="k">my</span><span class="s">(</span><span class="i">@RequiredKeys</span><span class="s">)</span><span class="sc">;</span>
1002 989
1003 990 <span class="i">@RequiredKeys</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1004 991
1005 992 <span class="k">if</span> <span class="s">(</span><span class="i">$FingerprintsStringType</span> =~ <span class="q">/FingerprintsBitVector$/i</span><span class="s">)</span> <span class="s">{</span>
1006 993 <span class="k">push</span> <span class="i">@RequiredKeys</span><span class="cm">,</span> <span class="q">qw(FingerprintsStringType Description Size BitStringFormat BitsOrder)</span><span class="sc">;</span>
1007 994 <span class="s">}</span>
1008 995 <span class="k">elsif</span> <span class="s">(</span><span class="i">$FingerprintsStringType</span> =~ <span class="q">/^FingerprintsVector/i</span><span class="s">)</span> <span class="s">{</span>
1009 996 <span class="k">push</span> <span class="i">@RequiredKeys</span><span class="cm">,</span> <span class="q">qw(FingerprintsStringType Description VectorStringFormat VectorValuesType)</span><span class="sc">;</span>
1010 997 <span class="s">}</span>
1011 998 <span class="k">else</span> <span class="s">{</span>
1012 999 <span class="w">carp</span> <span class="q">&quot;Warning: ${ClassName}-&gt;GetRequiredHeaderDataKeys: FingerprintsStringType value, $FingerprintsStringType, is not valid. Supported values: FingerprintsBitVector or FingerprintsVector...&quot;</span><span class="sc">;</span>
1013 1000 <span class="s">}</span>
1014 1001
1015 1002 <span class="k">return</span> <span class="i">@RequiredKeys</span><span class="sc">;</span>
1016 1003 <span class="s">}</span>
1017 1004
1018 1005 <span class="c"># Validate fingerprints string mode information...</span>
1019 1006 <span class="c">#</span>
1020 <a name="_ValidateReadFingerprintsStringMode-"></a>1007 <span class="k">sub </span><span class="m">_ValidateReadFingerprintsStringMode</span> <span class="s">{</span>
1021 1008 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1022 1009 <span class="k">my</span><span class="s">(</span><span class="i">$FingerprintsStringType</span><span class="cm">,</span> <span class="i">$FingerprintsStringDescription</span><span class="cm">,</span> <span class="i">$FingerprintsBitVectorStringMode</span><span class="cm">,</span> <span class="i">$FingerprintsVectorStringMode</span><span class="cm">,</span> <span class="i">$FirstFingerprintsStringType</span><span class="cm">,</span> <span class="i">$FirstFingerprintsStringDescription</span><span class="s">)</span><span class="sc">;</span>
1023 1010
1024 1011 <span class="i">$This</span>-&gt;{<span class="w">ValidFingerprintsStringMode</span>} = <span class="n">0</span><span class="sc">;</span>
1025 1012 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsBitVectorStringMode</span>} = <span class="n">0</span><span class="sc">;</span>
1026 1013 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsVectorStringMode</span>} = <span class="n">0</span><span class="sc">;</span>
1027 1014
1028 1015 <span class="i">$This</span>-&gt;{<span class="w">FirstFingerprintsStringType</span>} = <span class="q">&#39;&#39;</span><span class="sc">;</span>
1029 1016 <span class="i">$This</span>-&gt;{<span class="w">FirstFingerprintsStringDescription</span>} = <span class="q">&#39;&#39;</span><span class="sc">;</span>
1030 1017
1031 1018 <span class="i">$FingerprintsBitVectorStringMode</span> = <span class="n">0</span><span class="sc">;</span>
1032 1019 <span class="i">$FingerprintsVectorStringMode</span> = <span class="n">0</span><span class="sc">;</span>
1033 1020
1034 1021 <span class="i">$FirstFingerprintsStringType</span> = <span class="q">&#39;&#39;</span><span class="sc">;</span>
1035 1022 <span class="i">$FirstFingerprintsStringDescription</span> = <span class="q">&#39;&#39;</span><span class="sc">;</span>
1036 1023
1037 1024 <span class="i">$FingerprintsStringType</span> = <span class="i">$This</span><span class="i">-&gt;GetHeaderDataKeyValue</span><span class="s">(</span><span class="q">&#39;FingerprintsStringType&#39;</span><span class="s">)</span><span class="sc">;</span>
1038 1025 <span class="i">$FingerprintsStringDescription</span> = <span class="i">$This</span><span class="i">-&gt;GetHeaderDataKeyValue</span><span class="s">(</span><span class="q">&#39;Description&#39;</span><span class="s">)</span><span class="sc">;</span>
1039 1026
1040 1027 <span class="k">if</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsStringMode</span>} =~ <span class="q">/^FingerprintsBitVectorString$/i</span><span class="s">)</span> <span class="s">{</span>
1041 1028 <span class="k">if</span> <span class="s">(</span><span class="i">$FingerprintsStringType</span> !~ <span class="q">/^FingerprintsBitVector$/i</span><span class="s">)</span> <span class="s">{</span>
1042 1029 <span class="w">carp</span> <span class="q">&quot;Warning: ${ClassName}-&gt;_ValidateReadFingerprintsStringMode: Fingerprints string data type, $FingerprintsStringType, doesn&#39;t correspond to, FingerprintsBitVectorString, specified using \&quot;FingerprintsStringMode\&quot;...&quot;</span><span class="sc">;</span>
1043 1030 <span class="k">return</span> <span class="n">0</span><span class="sc">;</span>
1044 1031 <span class="s">}</span>
1045 1032 <span class="i">$FingerprintsBitVectorStringMode</span> = <span class="n">1</span><span class="sc">;</span>
1046 1033 <span class="i">$FirstFingerprintsStringType</span> = <span class="q">&#39;FingerprintsBitVector&#39;</span><span class="sc">;</span>
1047 1034 <span class="i">$FirstFingerprintsStringDescription</span> = <span class="i">$FingerprintsStringDescription</span><span class="sc">;</span>
1048 1035 <span class="s">}</span>
1049 1036 <span class="k">elsif</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsStringMode</span>} =~ <span class="q">/^FingerprintsVectorString$/i</span><span class="s">)</span> <span class="s">{</span>
1050 1037 <span class="k">if</span> <span class="s">(</span><span class="i">$FingerprintsStringType</span> !~ <span class="q">/^FingerprintsVector$/i</span><span class="s">)</span> <span class="s">{</span>
1051 1038 <span class="w">carp</span> <span class="q">&quot;Warning: ${ClassName}-&gt;_ValidateReadFingerprintsStringMode: Fingerprints string data type, $FingerprintsStringType, doesn&#39;t correspond to, FingerprintsVectorString, specified using \&quot;FingerprintsStringMode\&quot;...&quot;</span><span class="sc">;</span>
1052 1039 <span class="k">return</span> <span class="n">0</span><span class="sc">;</span>
1053 1040 <span class="s">}</span>
1054 1041 <span class="i">$FingerprintsVectorStringMode</span> = <span class="n">1</span><span class="sc">;</span>
1055 1042 <span class="i">$FirstFingerprintsStringType</span> = <span class="q">&#39;FingerprintsVector&#39;</span><span class="sc">;</span>
1056 1043 <span class="i">$FirstFingerprintsStringDescription</span> = <span class="i">$FingerprintsStringDescription</span><span class="sc">;</span>
1057 1044 <span class="s">}</span>
1058 1045 <span class="k">else</span> <span class="s">{</span>
1059 1046 <span class="c"># AutoDetect mode...</span>
1060 1047 <span class="k">if</span> <span class="s">(</span><span class="i">$FingerprintsStringType</span> =~ <span class="q">/^FingerprintsBitVector$/i</span><span class="s">)</span> <span class="s">{</span>
1061 1048 <span class="i">$FingerprintsBitVectorStringMode</span> = <span class="n">1</span><span class="sc">;</span>
1062 1049 <span class="s">}</span>
1063 1050 <span class="k">elsif</span> <span class="s">(</span><span class="i">$FingerprintsStringType</span> =~ <span class="q">/^FingerprintsVector$/i</span><span class="s">)</span> <span class="s">{</span>
1064 1051 <span class="i">$FingerprintsVectorStringMode</span> = <span class="n">1</span><span class="sc">;</span>
1065 1052 <span class="s">}</span>
1066 1053 <span class="k">else</span> <span class="s">{</span>
1067 1054 <span class="w">carp</span> <span class="q">&quot;Warning: ${ClassName}-&gt;_ValidateReadFingerprintsStringMode: Fingerprints string data type, $FingerprintsStringType, identified during, AutoDetect, value of \&quot;FingerprintsStringMode\&quot; is not valid; Supported fingerprints types: FingerprintBitVector or FingerprintsVector...&quot;</span><span class="sc">;</span>
1068 1055 <span class="k">return</span> <span class="n">0</span><span class="sc">;</span>
1069 1056 <span class="s">}</span>
1070 1057 <span class="i">$FirstFingerprintsStringType</span> = <span class="i">$FingerprintsStringType</span><span class="sc">;</span>
1071 1058 <span class="i">$FirstFingerprintsStringDescription</span> = <span class="i">$FingerprintsStringDescription</span><span class="sc">;</span>
1072 1059 <span class="s">}</span>
1073 1060
1074 1061 <span class="i">$This</span>-&gt;{<span class="w">ValidFingerprintsStringMode</span>} = <span class="n">1</span><span class="sc">;</span>
1075 1062
1076 1063 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsBitVectorStringMode</span>} = <span class="i">$FingerprintsBitVectorStringMode</span><span class="sc">;</span>
1077 1064 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsVectorStringMode</span>} = <span class="i">$FingerprintsVectorStringMode</span><span class="sc">;</span>
1078 1065
1079 1066 <span class="i">$This</span>-&gt;{<span class="w">FirstFingerprintsStringType</span>} = <span class="i">$FirstFingerprintsStringType</span><span class="sc">;</span>
1080 1067 <span class="i">$This</span>-&gt;{<span class="w">FirstFingerprintsStringDescription</span>} = <span class="i">$FirstFingerprintsStringDescription</span><span class="sc">;</span>
1081 1068
1082 1069 <span class="k">return</span> <span class="n">1</span><span class="sc">;</span>
1083 1070 <span class="s">}</span>
1084 1071
1085 1072 <span class="c"># Write fingerprints string generated from specified fingerprints - fingerprints-bit vector or</span>
1086 1073 <span class="c"># fingerprints vector - object and other data to FP file...</span>
1087 1074 <span class="c">#</span>
1088 <a name="WriteFingerprints-"></a>1075 <span class="k">sub </span><span class="m">WriteFingerprints</span> <span class="s">{</span>
1089 1076 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">$FingerprintsObject</span><span class="cm">,</span> <span class="i">$CompoundID</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1090 1077
1091 1078 <span class="c"># Initialize data for current line...</span>
1092 1079 <span class="i">$This</span><span class="i">-&gt;_InitializeWriteDataLine</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1093 1080
1094 1081 <span class="c"># Set fingerprints object and compound ID...</span>
1095 1082 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsObject</span>} = <span class="i">$FingerprintsObject</span><span class="sc">;</span>
1096 1083 <span class="i">$This</span><span class="i">-&gt;SetCompoundID</span><span class="s">(</span><span class="i">$CompoundID</span><span class="s">)</span><span class="sc">;</span>
1097 1084
1098 1085 <span class="c"># Generate fingerprints string...</span>
1099 1086 <span class="i">$This</span><span class="i">-&gt;_GenerateFingerprintsString</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1100 1087
1101 1088 <span class="c"># Generate partial fingerprints string...</span>
1102 1089 <span class="i">$This</span><span class="i">-&gt;_GeneratePartialFingerprintsStringFromFingerprintsString</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1103 1090
1104 1091 <span class="c"># Write data line..</span>
1105 1092 <span class="i">$This</span><span class="i">-&gt;_WriteDataLine</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1106 1093
1107 1094 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1108 1095 <span class="s">}</span>
1109 1096
1110 1097 <span class="c"># Write fingerprints string and other data to FP file...</span>
1111 1098 <span class="c">#</span>
1112 1099 <span class="c"># Notes:</span>
1113 1100 <span class="c"># o FingerprintsStringMode, BitStringFormat, BitsOrder, VectorStringFormat values</span>
1114 1101 <span class="c"># are ignored during writing of fingerprints and it&#39;s written to the file as it is.</span>
1115 1102 <span class="c"># o FingerprintsString is a regular fingerprints string as oppose to a partial fingerprints</span>
1116 1103 <span class="c"># string.</span>
1117 1104 <span class="c">#</span>
1118 <a name="WriteFingerprintsString-"></a>1105 <span class="k">sub </span><span class="m">WriteFingerprintsString</span> <span class="s">{</span>
1119 1106 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">$FingerprintsString</span><span class="cm">,</span> <span class="i">$CompoundID</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1120 1107
1121 1108 <span class="c"># Initialize data for current line...</span>
1122 1109 <span class="i">$This</span><span class="i">-&gt;_InitializeWriteDataLine</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1123 1110
1124 1111 <span class="c"># Set fingerprints string and compound ID...</span>
1125 1112 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>} = <span class="i">$FingerprintsString</span><span class="sc">;</span>
1126 1113 <span class="i">$This</span><span class="i">-&gt;SetCompoundID</span><span class="s">(</span><span class="i">$CompoundID</span><span class="s">)</span><span class="sc">;</span>
1127 1114
1128 1115 <span class="c"># Generate fingerprints object...</span>
1129 1116 <span class="i">$This</span><span class="i">-&gt;_GenerateFingerprintsObject</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1130 1117
1131 1118 <span class="c"># Generate partial fingerprints string...</span>
1132 1119 <span class="i">$This</span><span class="i">-&gt;_GeneratePartialFingerprintsStringFromFingerprintsString</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1133 1120
1134 1121 <span class="c"># Write data line..</span>
1135 1122 <span class="i">$This</span><span class="i">-&gt;_WriteDataLine</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1136 1123
1137 1124 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1138 1125 <span class="s">}</span>
1139 1126
1140 1127 <span class="c"># Initialize data line for reading...</span>
1141 1128 <span class="c">#</span>
1142 <a name="_InitializeWriteDataLine-"></a>1129 <span class="k">sub </span><span class="m">_InitializeWriteDataLine</span> <span class="s">{</span>
1143 1130 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1144 1131
1145 1132 <span class="i">$This</span>-&gt;{<span class="w">DataLine</span>} = <span class="k">undef</span><span class="sc">;</span>
1146 1133 <span class="i">$This</span>-&gt;{<span class="w">CompoundID</span>} = <span class="k">undef</span><span class="sc">;</span>
1147 1134
1148 1135 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsObject</span>} = <span class="k">undef</span><span class="sc">;</span>
1149 1136
1150 1137 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>} = <span class="k">undef</span><span class="sc">;</span>
1151 1138 <span class="i">$This</span>-&gt;{<span class="w">PartialFingerprintsString</span>} = <span class="k">undef</span><span class="sc">;</span>
1152 1139
1153 1140 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1154 1141 <span class="s">}</span>
1155 1142
1156 1143 <span class="c"># Write fingerprints data line line...</span>
1157 1144 <span class="c">#</span>
1158 <a name="_WriteDataLine-"></a>1145 <span class="k">sub </span><span class="m">_WriteDataLine</span> <span class="s">{</span>
1159 1146 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1160 1147 <span class="k">my</span><span class="s">(</span><span class="i">$FileHandle</span><span class="cm">,</span> <span class="i">$Line</span><span class="s">)</span><span class="sc">;</span>
1161 1148
1162 1149 <span class="k">if</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FirstDataLineIO</span>}<span class="s">)</span> <span class="s">{</span>
1163 1150 <span class="i">$This</span><span class="i">-&gt;_ProcessFirstDataLineWrite</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1164 1151 <span class="s">}</span>
1165 1152
1166 1153 <span class="c"># Write data compound ID along with partial fingerprints string...</span>
1167 1154 <span class="i">$Line</span> = <span class="i">$This</span>-&gt;{<span class="w">CompoundID</span>} . <span class="q">&#39; &#39;</span> . <span class="i">$This</span>-&gt;{<span class="w">PartialFingerprintsString</span>}<span class="sc">;</span>
1168 1155
1169 1156 <span class="i">$This</span>-&gt;{<span class="w">LineNum</span>} += <span class="n">1</span><span class="sc">;</span>
1170 1157 <span class="i">$FileHandle</span> = <span class="i">$This</span>-&gt;{<span class="w">FileHandle</span>}<span class="sc">;</span>
1171 1158 <span class="k">print</span> <span class="i">$FileHandle</span> <span class="q">&quot;$Line\n&quot;</span><span class="sc">;</span>
1172 1159
1173 1160 <span class="i">$This</span>-&gt;{<span class="w">DataLine</span>} = <span class="i">$Line</span><span class="sc">;</span>
1174 1161
1175 1162 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1176 1163 <span class="s">}</span>
1177 1164
1178 1165 <span class="c"># Process first write...</span>
1179 1166 <span class="c">#</span>
1180 <a name="_ProcessFirstDataLineWrite-"></a>1167 <span class="k">sub </span><span class="m">_ProcessFirstDataLineWrite</span> <span class="s">{</span>
1181 1168 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1182 1169 <span class="k">my</span><span class="s">(</span><span class="i">$Line</span><span class="cm">,</span> <span class="i">$FileHandle</span><span class="s">)</span><span class="sc">;</span>
1183 1170
1184 1171 <span class="i">$This</span>-&gt;{<span class="w">FirstDataLineIO</span>} = <span class="n">0</span><span class="sc">;</span>
1185 1172
1186 1173 <span class="k">if</span> <span class="s">(</span><span class="i">$This</span><span class="i">-&gt;GetMode</span><span class="s">(</span><span class="s">)</span> =~ <span class="q">/^Write$/i</span><span class="s">)</span> <span class="s">{</span>
1187 1174 <span class="c"># Skip it for append mode...</span>
1188 1175 <span class="i">$This</span><span class="i">-&gt;_WritePackageAndTimeStampHeaderKeys</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1189 1176 <span class="i">$This</span><span class="i">-&gt;_WriteRequiredHeaderDataKeys</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1190 1177 <span class="s">}</span>
1191 1178
1192 1179 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1193 1180 <span class="s">}</span>
1194 1181
1195 1182 <span class="c"># Write out package and time stamp information...</span>
1196 1183 <span class="c">#</span>
1197 <a name="_WritePackageAndTimeStampHeaderKeys-"></a>1184 <span class="k">sub </span><span class="m">_WritePackageAndTimeStampHeaderKeys</span> <span class="s">{</span>
1198 1185 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1199 1186 <span class="k">my</span><span class="s">(</span><span class="i">$FileHandle</span><span class="cm">,</span> <span class="i">$Key</span><span class="cm">,</span> <span class="i">$Value</span><span class="s">)</span><span class="sc">;</span>
1200 1187
1201 1188 <span class="i">$FileHandle</span> = <span class="i">$This</span>-&gt;{<span class="w">FileHandle</span>}<span class="sc">;</span>
1202 1189
1203 1190 <span class="c"># Package information...</span>
1204 1191 <span class="i">$This</span>-&gt;{<span class="w">LineNum</span>} += <span class="n">1</span><span class="sc">;</span>
1205 1192 <span class="i">$Key</span> = <span class="q">&quot;Package&quot;</span><span class="sc">;</span> <span class="i">$Value</span> = <span class="i">PackageInfo::GetPackageName</span><span class="s">(</span><span class="s">)</span> . <span class="q">&quot; &quot;</span> . <span class="i">PackageInfo::GetVersionNumber</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1206 1193 <span class="k">print</span> <span class="i">$FileHandle</span> <span class="q">&quot;# $Key = $Value\n&quot;</span><span class="sc">;</span>
1207 1194
1208 1195 <span class="i">$This</span>-&gt;{<span class="w">LineNum</span>} += <span class="n">1</span><span class="sc">;</span>
1209 1196 <span class="i">$Key</span> = <span class="q">&quot;Release Date&quot;</span><span class="sc">;</span> <span class="i">$Value</span> = <span class="i">PackageInfo::GetReleaseDate</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1210 1197 <span class="k">print</span> <span class="i">$FileHandle</span> <span class="q">&quot;# $Key = $Value\n&quot;</span><span class="sc">;</span>
1211 1198
1212 1199 <span class="c"># Timestamp information...</span>
1213 1200 <span class="i">$This</span>-&gt;{<span class="w">LineNum</span>} += <span class="n">1</span><span class="sc">;</span>
1214 1201 <span class="k">print</span> <span class="i">$FileHandle</span> <span class="q">&quot;#\n&quot;</span><span class="sc">;</span>
1215 1202
1216 1203 <span class="i">$This</span>-&gt;{<span class="w">LineNum</span>} += <span class="n">1</span><span class="sc">;</span>
1217 1204 <span class="i">$Key</span> = <span class="q">&quot;TimeStamp&quot;</span><span class="sc">;</span> <span class="i">$Value</span> = <span class="i">TimeUtil::FPFileTimeStamp</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1218 1205 <span class="k">print</span> <span class="i">$FileHandle</span> <span class="q">&quot;# $Key = $Value\n&quot;</span><span class="sc">;</span>
1219 1206
1220 1207 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1221 1208 <span class="s">}</span>
1222 1209
1223 1210 <span class="c"># Write out required header data keys...</span>
1224 1211 <span class="c">#</span>
1225 <a name="_WriteRequiredHeaderDataKeys-"></a>1212 <span class="k">sub </span><span class="m">_WriteRequiredHeaderDataKeys</span> <span class="s">{</span>
1226 1213 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1227 1214 <span class="k">my</span><span class="s">(</span><span class="i">$FileHandle</span><span class="cm">,</span> <span class="i">$Key</span><span class="cm">,</span> <span class="i">$Value</span><span class="s">)</span><span class="sc">;</span>
1228 1215
1229 1216 <span class="i">$FileHandle</span> = <span class="i">$This</span>-&gt;{<span class="w">FileHandle</span>}<span class="sc">;</span>
1230 1217
1231 1218 <span class="i">$This</span><span class="i">-&gt;_GenerateWriteRequiredHeaderDataKeys</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1232 1219
1233 1220 <span class="i">$This</span>-&gt;{<span class="w">LineNum</span>} += <span class="n">1</span><span class="sc">;</span>
1234 1221 <span class="k">print</span> <span class="i">$FileHandle</span> <span class="q">&quot;#\n&quot;</span><span class="sc">;</span>
1235 1222
1236 1223 <span class="k">for</span> <span class="i">$Key</span> <span class="s">(</span><span class="i">@</span>{<span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeys</span>}}<span class="s">)</span> <span class="s">{</span>
1237 1224 <span class="i">$Value</span> = <span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeysAndValues</span>}{<span class="i">$Key</span>}<span class="sc">;</span>
1238 1225
1239 1226 <span class="i">$This</span>-&gt;{<span class="w">LineNum</span>} += <span class="n">1</span><span class="sc">;</span>
1240 1227 <span class="k">print</span> <span class="i">$FileHandle</span> <span class="q">&quot;# $Key = $Value\n&quot;</span><span class="sc">;</span>
1241 1228
1242 1229 <span class="k">if</span> <span class="s">(</span><span class="i">$Key</span> =~ <span class="q">/^FingerprintsStringType$/i</span><span class="s">)</span> <span class="s">{</span>
1243 1230 <span class="i">$This</span>-&gt;{<span class="w">LineNum</span>} += <span class="n">1</span><span class="sc">;</span>
1244 1231 <span class="k">print</span> <span class="i">$FileHandle</span> <span class="q">&quot;#\n&quot;</span><span class="sc">;</span>
1245 1232 <span class="s">}</span>
1246 1233 <span class="s">}</span>
1247 1234
1248 1235 <span class="i">$This</span>-&gt;{<span class="w">LineNum</span>} += <span class="n">1</span><span class="sc">;</span>
1249 1236 <span class="k">print</span> <span class="i">$FileHandle</span> <span class="q">&quot;#\n&quot;</span><span class="sc">;</span>
1250 1237
1251 1238 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1252 1239 <span class="s">}</span>
1253 1240
1254 <a name="_GenerateWriteRequiredHeaderDataKeys-"></a>1241 <span class="k">sub </span><span class="m">_GenerateWriteRequiredHeaderDataKeys</span> <span class="s">{</span>
1255 1242 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1256 1243
1257 1244 <span class="k">if</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsBitVectorStringMode</span>} &amp;&amp; <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>} =~ <span class="q">/^FingerprintsBitVector/i</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
1258 1245 <span class="i">$This</span><span class="i">-&gt;_GenerateWriteRequiredHeaderDataKeysForBitVectorString</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1259 1246 <span class="s">}</span>
1260 1247 <span class="k">elsif</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsVectorStringMode</span>} &amp;&amp; <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>} =~ <span class="q">/^FingerprintsVector/i</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
1261 1248 <span class="i">$This</span><span class="i">-&gt;_GenerateWriteRequiredHeaderDataKeysForVectorString</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1262 1249 <span class="s">}</span>
1263 1250 <span class="k">else</span> <span class="s">{</span>
1264 1251 <span class="w">croak</span> <span class="q">&quot;Error: ${ClassName}-&gt;_GenerateWriteRequiredHeaderDataKeys: Required header data keys can&#39;t be generated: FingerprintsStringMode value, $This-&gt;{FingerprintsStringMode}, doesn&#39;t correspond to type of first FingerprintsString: $This-&gt;{FingerprintsString}...&quot;</span><span class="sc">;</span>
1265 1252 <span class="s">}</span>
1266 1253
1267 1254 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1268 1255 <span class="s">}</span>
1269 1256
1270 1257 <span class="c"># Generate required data header keys and values for writing fingerprints bit vector string...</span>
1271 1258 <span class="c">#</span>
1272 <a name="_GenerateWriteRequiredHeaderDataKeysForBitVectorString-"></a>1259 <span class="k">sub </span><span class="m">_GenerateWriteRequiredHeaderDataKeysForBitVectorString</span> <span class="s">{</span>
1273 1260 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1274 1261 <span class="k">my</span><span class="s">(</span><span class="i">$Key</span><span class="cm">,</span> <span class="i">$VectorType</span><span class="cm">,</span> <span class="i">$Description</span><span class="cm">,</span> <span class="i">$Size</span><span class="cm">,</span> <span class="i">$BitStringFormat</span><span class="cm">,</span> <span class="i">$BitsOrder</span><span class="s">)</span><span class="sc">;</span>
1275 1262
1276 1263 <span class="i">@</span>{<span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeys</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1277 1264 <span class="k">push</span> <span class="i">@</span>{<span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeys</span>}}<span class="cm">,</span> <span class="i">$This</span><span class="i">-&gt;_GetRequiredHeaderDataKeys</span><span class="s">(</span><span class="q">&#39;FingerprintsBitVector&#39;</span><span class="s">)</span><span class="sc">;</span>
1278 1265
1279 1266 <span class="s">(</span><span class="i">$VectorType</span><span class="cm">,</span> <span class="i">$Description</span><span class="cm">,</span> <span class="i">$Size</span><span class="cm">,</span> <span class="i">$BitStringFormat</span><span class="cm">,</span> <span class="i">$BitsOrder</span><span class="s">)</span> = <span class="i">Fingerprints::FingerprintsStringUtil::GetFingerprintsStringValues</span><span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>}<span class="s">)</span><span class="sc">;</span>
1280 1267
1281 1268 <span class="i">%</span>{<span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeysAndValues</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1282 1269
1283 1270 <span class="k">for</span> <span class="i">$Key</span> <span class="s">(</span><span class="i">@</span>{<span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeys</span>}}<span class="s">)</span> <span class="s">{</span>
1284 1271 <span class="j">KEYTYPE:</span> <span class="s">{</span>
1285 1272 <span class="k">if</span> <span class="s">(</span><span class="i">$Key</span> =~ <span class="q">/^FingerprintsStringType$/i</span><span class="s">)</span> <span class="s">{</span>
1286 1273 <span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeysAndValues</span>}{<span class="i">$Key</span>} = <span class="i">$VectorType</span><span class="sc">;</span>
1287 1274 <span class="k">last</span> <span class="j">KEYTYPE</span><span class="sc">;</span>
1288 1275 <span class="s">}</span>
1289 1276 <span class="k">if</span> <span class="s">(</span><span class="i">$Key</span> =~ <span class="q">/^Description$/i</span><span class="s">)</span> <span class="s">{</span>
1290 1277 <span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeysAndValues</span>}{<span class="i">$Key</span>} = <span class="i">$Description</span><span class="sc">;</span>
1291 1278 <span class="k">last</span> <span class="j">KEYTYPE</span><span class="sc">;</span>
1292 1279 <span class="s">}</span>
1293 1280 <span class="k">if</span> <span class="s">(</span><span class="i">$Key</span> =~ <span class="q">/^Size$/i</span><span class="s">)</span> <span class="s">{</span>
1294 1281 <span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeysAndValues</span>}{<span class="i">$Key</span>} = <span class="i">$Size</span><span class="sc">;</span>
1295 1282 <span class="k">last</span> <span class="j">KEYTYPE</span><span class="sc">;</span>
1296 1283 <span class="s">}</span>
1297 1284 <span class="k">if</span> <span class="s">(</span><span class="i">$Key</span> =~ <span class="q">/^BitStringFormat$/i</span><span class="s">)</span> <span class="s">{</span>
1298 1285 <span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeysAndValues</span>}{<span class="i">$Key</span>} = <span class="i">$BitStringFormat</span><span class="sc">;</span>
1299 1286 <span class="k">last</span> <span class="j">KEYTYPE</span><span class="sc">;</span>
1300 1287 <span class="s">}</span>
1301 1288 <span class="k">if</span> <span class="s">(</span><span class="i">$Key</span> =~ <span class="q">/^BitsOrder$/i</span><span class="s">)</span> <span class="s">{</span>
1302 1289 <span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeysAndValues</span>}{<span class="i">$Key</span>} = <span class="i">$BitsOrder</span><span class="sc">;</span>
1303 1290 <span class="k">last</span> <span class="j">KEYTYPE</span><span class="sc">;</span>
1304 1291 <span class="s">}</span>
1305 1292 <span class="w">croak</span> <span class="q">&quot;Error: ${ClassName}-&gt;_GenerateWriteRequiredHeaderDataKeysForBitVectorString: Required header data key, $Key, value can&#39;t be generated: It&#39;s not a known key ...&quot;</span><span class="sc">;</span>
1306 1293 <span class="s">}</span>
1307 1294 <span class="s">}</span>
1308 1295
1309 1296 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1310 1297 <span class="s">}</span>
1311 1298
1312 1299 <span class="c"># Generate required data header keys and values for writing fingerprints vector string...</span>
1313 1300 <span class="c">#</span>
1314 <a name="_GenerateWriteRequiredHeaderDataKeysForVectorString-"></a>1301 <span class="k">sub </span><span class="m">_GenerateWriteRequiredHeaderDataKeysForVectorString</span> <span class="s">{</span>
1315 1302 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1316 1303 <span class="k">my</span><span class="s">(</span><span class="i">$Key</span><span class="cm">,</span> <span class="i">$Value</span><span class="cm">,</span> <span class="i">$VectorType</span><span class="cm">,</span> <span class="i">$Description</span><span class="cm">,</span> <span class="i">$NumOfValues</span><span class="cm">,</span> <span class="i">$VectorValuesType</span><span class="cm">,</span> <span class="i">$VectorStringFormat</span><span class="s">)</span><span class="sc">;</span>
1317 1304
1318 1305 <span class="i">@</span>{<span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeys</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1319 1306 <span class="k">push</span> <span class="i">@</span>{<span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeys</span>}}<span class="cm">,</span> <span class="i">$This</span><span class="i">-&gt;_GetRequiredHeaderDataKeys</span><span class="s">(</span><span class="q">&#39;FingerprintsVector&#39;</span><span class="s">)</span><span class="sc">;</span>
1320 1307
1321 1308 <span class="s">(</span><span class="i">$VectorType</span><span class="cm">,</span> <span class="i">$Description</span><span class="cm">,</span> <span class="i">$NumOfValues</span><span class="cm">,</span> <span class="i">$VectorValuesType</span><span class="cm">,</span> <span class="i">$VectorStringFormat</span><span class="s">)</span> = <span class="i">Fingerprints::FingerprintsStringUtil::GetFingerprintsStringValues</span><span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>}<span class="s">)</span><span class="sc">;</span>
1322 1309
1323 1310 <span class="i">%</span>{<span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeysAndValues</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1324 1311
1325 1312 <span class="k">for</span> <span class="i">$Key</span> <span class="s">(</span><span class="i">@</span>{<span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeys</span>}}<span class="s">)</span> <span class="s">{</span>
1326 1313 <span class="j">KEYTYPE:</span> <span class="s">{</span>
1327 1314 <span class="k">if</span> <span class="s">(</span><span class="i">$Key</span> =~ <span class="q">/^FingerprintsStringType$/i</span><span class="s">)</span> <span class="s">{</span>
1328 1315 <span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeysAndValues</span>}{<span class="i">$Key</span>} = <span class="i">$VectorType</span><span class="sc">;</span>
1329 1316 <span class="k">last</span> <span class="j">KEYTYPE</span><span class="sc">;</span>
1330 1317 <span class="s">}</span>
1331 1318 <span class="k">if</span> <span class="s">(</span><span class="i">$Key</span> =~ <span class="q">/^Description$/i</span><span class="s">)</span> <span class="s">{</span>
1332 1319 <span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeysAndValues</span>}{<span class="i">$Key</span>} = <span class="i">$Description</span><span class="sc">;</span>
1333 1320 <span class="k">last</span> <span class="j">KEYTYPE</span><span class="sc">;</span>
1334 1321 <span class="s">}</span>
1335 1322 <span class="k">if</span> <span class="s">(</span><span class="i">$Key</span> =~ <span class="q">/^VectorValuesType$/i</span><span class="s">)</span> <span class="s">{</span>
1336 1323 <span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeysAndValues</span>}{<span class="i">$Key</span>} = <span class="i">$VectorValuesType</span><span class="sc">;</span>
1337 1324 <span class="k">last</span> <span class="j">KEYTYPE</span><span class="sc">;</span>
1338 1325 <span class="s">}</span>
1339 1326 <span class="k">if</span> <span class="s">(</span><span class="i">$Key</span> =~ <span class="q">/^VectorStringFormat$/i</span><span class="s">)</span> <span class="s">{</span>
1340 1327 <span class="i">$This</span>-&gt;{<span class="w">RequiredHeaderDataKeysAndValues</span>}{<span class="i">$Key</span>} = <span class="i">$VectorStringFormat</span><span class="sc">;</span>
1341 1328 <span class="k">last</span> <span class="j">KEYTYPE</span><span class="sc">;</span>
1342 1329 <span class="s">}</span>
1343 1330 <span class="w">croak</span> <span class="q">&quot;Error: ${ClassName}-&gt;_GenerateWriteRequiredHeaderDataKeysForVectorString: Required header data key, $Key, value can&#39;t be generated: It&#39;s not a known key ...&quot;</span><span class="sc">;</span>
1344 1331 <span class="s">}</span>
1345 1332 <span class="s">}</span>
1346 1333
1347 1334 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1348 1335 <span class="s">}</span>
1349 1336
1350 1337
1351 1338 <span class="c"># Get ready for writing fingerprints FP file...</span>
1352 1339 <span class="c">#</span>
1353 <a name="_PrepareForWritingFingerprintsFPFileData-"></a>1340 <span class="k">sub </span><span class="m">_PrepareForWritingFingerprintsFPFileData</span> <span class="s">{</span>
1354 1341 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1355 1342 <span class="k">my</span><span class="s">(</span><span class="i">$FPFile</span><span class="cm">,</span> <span class="i">$FileDir</span><span class="cm">,</span> <span class="i">$FileName</span><span class="cm">,</span> <span class="i">$FileExt</span><span class="cm">,</span> <span class="i">$OutDelim</span><span class="s">)</span><span class="sc">;</span>
1356 1343
1357 1344 <span class="i">$FPFile</span> = <span class="i">$This</span>-&gt;{<span class="w">Name</span>}<span class="sc">;</span>
1358 1345 <span class="k">if</span> <span class="s">(</span>!<span class="i">$This</span>-&gt;{<span class="w">Overwrite</span>}<span class="s">)</span> <span class="s">{</span>
1359 1346 <span class="k">if</span> <span class="s">(</span><span class="k">-e</span> <span class="i">$FPFile</span><span class="s">)</span> <span class="s">{</span>
1360 1347 <span class="w">croak</span> <span class="q">&quot;Error: ${ClassName}-&gt;_PrepareForWritingFingerprintsFPFileData: File, $FPFile, already exist. Use overwrite option...&quot;</span><span class="sc">;</span>
1361 1348 <span class="s">}</span>
1362 1349 <span class="s">}</span>
1363 1350
1364 1351 <span class="c"># Setup FingerprintsStringMode status...</span>
1365 1352 <span class="c">#</span>
1366 1353 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsBitVectorStringMode</span>} = <span class="n">0</span><span class="sc">;</span>
1367 1354 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsVectorStringMode</span>} = <span class="n">0</span><span class="sc">;</span>
1368 1355 <span class="i">$This</span>-&gt;{<span class="w">ValidFingerprintsStringMode</span>} = <span class="n">0</span><span class="sc">;</span>
1369 1356
1370 1357 <span class="k">if</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsStringMode</span>} =~ <span class="q">/^FingerprintsBitVectorString$/i</span><span class="s">)</span> <span class="s">{</span>
1371 1358 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsBitVectorStringMode</span>} = <span class="n">1</span><span class="sc">;</span>
1372 1359 <span class="s">}</span>
1373 1360 <span class="k">elsif</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsStringMode</span>} =~ <span class="q">/^FingerprintsVectorString$/i</span><span class="s">)</span> <span class="s">{</span>
1374 1361 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsVectorStringMode</span>} = <span class="n">1</span><span class="sc">;</span>
1375 1362 <span class="s">}</span>
1376 1363
1377 1364 <span class="i">$This</span>-&gt;{<span class="w">ValidFingerprintsStringMode</span>} = <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsBitVectorStringMode</span>} || <span class="i">$This</span>-&gt;{<span class="w">FingerprintsVectorStringMode</span>}<span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span> <span class="n">0</span><span class="sc">;</span>
1378 1365
1379 1366 <span class="k">if</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsBitVectorStringMode</span>}<span class="s">)</span> <span class="s">{</span>
1380 1367 <span class="i">$This</span><span class="i">-&gt;_SetDefaultBitStringFormat</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1381 1368 <span class="i">$This</span><span class="i">-&gt;_SetDefaultBitsOrder</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1382 1369 <span class="s">}</span>
1383 1370 <span class="k">elsif</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsVectorStringMode</span>}<span class="s">)</span> <span class="s">{</span>
1384 1371 <span class="i">$This</span><span class="i">-&gt;_SetDefaultVectorStringFormat</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1385 1372 <span class="s">}</span>
1386 1373
1387 1374 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1388 1375 <span class="s">}</span>
1389 1376
1390 1377 <span class="c"># Set default value for bit string format...</span>
1391 1378 <span class="c">#</span>
1392 <a name="_SetDefaultBitStringFormat-"></a>1379 <span class="k">sub </span><span class="m">_SetDefaultBitStringFormat</span> <span class="s">{</span>
1393 1380 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1394 1381
1395 1382 <span class="k">if</span> <span class="s">(</span>!<span class="i">$This</span>-&gt;{<span class="w">BitStringFormat</span>}<span class="s">)</span> <span class="s">{</span>
1396 1383 <span class="i">$This</span>-&gt;{<span class="w">BitStringFormat</span>} = <span class="i">Fingerprints::FingerprintsStringUtil::GetDefaultBitStringFormat</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1397 1384 <span class="s">}</span>
1398 1385
1399 1386 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1400 1387 <span class="s">}</span>
1401 1388
1402 1389 <span class="c"># Set default value for bit string format...</span>
1403 1390 <span class="c">#</span>
1404 <a name="_SetDefaultBitsOrder-"></a>1391 <span class="k">sub </span><span class="m">_SetDefaultBitsOrder</span> <span class="s">{</span>
1405 1392 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1406 1393
1407 1394 <span class="k">if</span> <span class="s">(</span>!<span class="i">$This</span>-&gt;{<span class="w">BitsOrder</span>}<span class="s">)</span> <span class="s">{</span>
1408 1395 <span class="i">$This</span>-&gt;{<span class="w">BitsOrder</span>} = <span class="i">Fingerprints::FingerprintsStringUtil::GetDefaultBitsOrder</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1409 1396 <span class="s">}</span>
1410 1397
1411 1398 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1412 1399 <span class="s">}</span>
1413 1400
1414 1401 <span class="c"># Set default value for vector string format...</span>
1415 1402 <span class="c">#</span>
1416 <a name="_SetDefaultVectorStringFormat-"></a>1403 <span class="k">sub </span><span class="m">_SetDefaultVectorStringFormat</span> <span class="s">{</span>
1417 1404 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1418 1405
1419 1406 <span class="k">if</span> <span class="s">(</span>!<span class="i">$This</span>-&gt;{<span class="w">VectorStringFormat</span>} &amp;&amp; <span class="i">$This</span>-&gt;{<span class="w">FingerprintsObject</span>}<span class="s">)</span> <span class="s">{</span>
1420 1407 <span class="i">$This</span>-&gt;{<span class="w">VectorStringFormat</span>} = <span class="i">Fingerprints::FingerprintsStringUtil::GetDefaultVectorStringFormat</span><span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsObject</span>}<span class="s">)</span><span class="sc">;</span>
1421 1408 <span class="s">}</span>
1422 1409
1423 1410 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1424 1411 <span class="s">}</span>
1425 1412
1426 1413 <span class="c"># Generate fingerprints object using current fingerprints string...</span>
1427 1414 <span class="c">#</span>
1428 <a name="_GenerateFingerprintsObject-"></a>1415 <span class="k">sub </span><span class="m">_GenerateFingerprintsObject</span> <span class="s">{</span>
1429 1416 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1430 1417
1431 1418 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsObject</span>} = <span class="k">undef</span><span class="sc">;</span>
1432 1419
1433 1420 <span class="k">if</span> <span class="s">(</span>!<span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>}<span class="s">)</span> <span class="s">{</span>
1434 1421 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1435 1422 <span class="s">}</span>
1436 1423
1437 1424 <span class="k">if</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsBitVectorStringMode</span>}<span class="s">)</span> <span class="s">{</span>
1438 1425 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsObject</span>} = <span class="i">Fingerprints::FingerprintsStringUtil::ParseFingerprintsBitVectorString</span><span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>}<span class="s">)</span><span class="sc">;</span>
1439 1426 <span class="s">}</span>
1440 1427 <span class="k">elsif</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsVectorStringMode</span>}<span class="s">)</span> <span class="s">{</span>
1441 1428 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsObject</span>} = <span class="i">Fingerprints::FingerprintsStringUtil::ParseFingerprintsVectorString</span><span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>}<span class="s">)</span><span class="sc">;</span>
1442 1429 <span class="s">}</span>
1443 1430 <span class="k">else</span> <span class="s">{</span>
1444 1431 <span class="k">return</span> <span class="k">undef</span><span class="sc">;</span>
1445 1432 <span class="s">}</span>
1446 1433
1447 1434 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1448 1435 <span class="s">}</span>
1449 1436
1450 1437 <span class="c"># Generate fingerprints string using current fingerprints object...</span>
1451 1438 <span class="c">#</span>
1452 <a name="_GenerateFingerprintsString-"></a>1439 <span class="k">sub </span><span class="m">_GenerateFingerprintsString</span> <span class="s">{</span>
1453 1440 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1454 1441
1455 1442 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>} = <span class="q">&#39;&#39;</span><span class="sc">;</span>
1456 1443
1457 1444 <span class="k">if</span> <span class="s">(</span>!<span class="i">$This</span>-&gt;{<span class="w">FingerprintsObject</span>}<span class="s">)</span> <span class="s">{</span>
1458 1445 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1459 1446 <span class="s">}</span>
1460 1447
1461 1448 <span class="k">if</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsBitVectorStringMode</span>}<span class="s">)</span> <span class="s">{</span>
1462 1449 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>} = <span class="i">Fingerprints::FingerprintsStringUtil::GenerateFingerprintsString</span><span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsObject</span>}<span class="cm">,</span> <span class="i">$This</span>-&gt;{<span class="w">BitStringFormat</span>}<span class="cm">,</span> <span class="i">$This</span>-&gt;{<span class="w">BitsOrder</span>}<span class="s">)</span><span class="sc">;</span>
1463 1450 <span class="s">}</span>
1464 1451 <span class="k">elsif</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsVectorStringMode</span>}<span class="s">)</span> <span class="s">{</span>
1465 1452 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>} = <span class="i">Fingerprints::FingerprintsStringUtil::GenerateFingerprintsString</span><span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsObject</span>}<span class="cm">,</span> <span class="i">$This</span>-&gt;{<span class="w">VectorStringFormat</span>}<span class="s">)</span><span class="sc">;</span>
1466 1453 <span class="s">}</span>
1467 1454
1468 1455 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1469 1456 <span class="s">}</span>
1470 1457
1471 1458 <span class="c"># Generate fingerprints string using partial fingerprints string and header keys data...</span>
1472 1459 <span class="c">#</span>
1473 1460 <span class="c"># Notes:</span>
1474 1461 <span class="c"># o FP file fingerprints data line only contain partial fingerprints data which</span>
1475 1462 <span class="c"># can&#39;t be used directly to create fingerprints bit-vector or vector objects</span>
1476 1463 <span class="c"># using functions available in FingerprintsStringUtil.pm module</span>
1477 1464 <span class="c">#</span>
1478 <a name="_GenerateFingerprintsStringFromPartialFingerprintsString-"></a>1465 <span class="k">sub </span><span class="m">_GenerateFingerprintsStringFromPartialFingerprintsString</span> <span class="s">{</span>
1479 1466 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1480 1467 <span class="k">my</span><span class="s">(</span><span class="i">$FPStringDelim</span><span class="s">)</span><span class="sc">;</span>
1481 1468
1482 1469 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>} = <span class="q">&#39;&#39;</span><span class="sc">;</span>
1483 1470
1484 1471 <span class="k">if</span> <span class="s">(</span>!<span class="i">$This</span>-&gt;{<span class="w">PartialFingerprintsString</span>}<span class="s">)</span> <span class="s">{</span>
1485 1472 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1486 1473 <span class="s">}</span>
1487 1474
1488 1475 <span class="i">$FPStringDelim</span> = <span class="i">Fingerprints::FingerprintsStringUtil::GetFingeprintsStringDelimiter</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1489 1476
1490 1477 <span class="k">if</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsBitVectorStringMode</span>}<span class="s">)</span> <span class="s">{</span>
1491 1478 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>} = <span class="i">$This</span>-&gt;{<span class="w">FingerprintsBitVectorStringPrefix</span>} . <span class="i">$FPStringDelim</span> . <span class="i">$This</span>-&gt;{<span class="w">PartialFingerprintsString</span>}<span class="sc">;</span>
1492 1479 <span class="s">}</span>
1493 1480 <span class="k">elsif</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsVectorStringMode</span>}<span class="s">)</span> <span class="s">{</span>
1494 1481 <span class="k">my</span><span class="s">(</span><span class="i">$NumOfValues</span><span class="cm">,</span> <span class="i">$VectorStringData</span><span class="s">)</span><span class="sc">;</span>
1495 1482
1496 1483 <span class="s">(</span><span class="i">$NumOfValues</span><span class="cm">,</span> <span class="i">$VectorStringData</span><span class="s">)</span> = <span class="i">$This</span>-&gt;{<span class="w">PartialFingerprintsString</span>} =~ <span class="q">/^(.*?)$FPStringDelim(.*?)$/</span><span class="sc">;</span>
1497 1484 <span class="k">if</span> <span class="s">(</span>!<span class="s">(</span><span class="k">defined</span><span class="s">(</span><span class="i">$NumOfValues</span><span class="s">)</span> &amp;&amp; <span class="k">defined</span><span class="s">(</span><span class="i">$VectorStringData</span><span class="s">)</span> &amp;&amp; <span class="i">$VectorStringData</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
1498 1485 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1499 1486 <span class="s">}</span>
1500 1487
1501 1488 <span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>} = <span class="i">$This</span>-&gt;{<span class="w">FingerprintsVectorStringPrefix1</span>} . <span class="i">$FPStringDelim</span> . <span class="i">$NumOfValues</span> . <span class="i">$FPStringDelim</span> . <span class="i">$This</span>-&gt;{<span class="w">FingerprintsVectorStringPrefix2</span>} . <span class="i">$FPStringDelim</span> . <span class="i">$VectorStringData</span><span class="sc">;</span>
1502 1489 <span class="s">}</span>
1503 1490
1504 1491 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1505 1492 <span class="s">}</span>
1506 1493
1507 1494 <span class="c"># Generate partial fingerprints string using fingerprints string and header keys data...</span>
1508 1495 <span class="c">#</span>
1509 1496 <span class="c"># Notes:</span>
1510 1497 <span class="c"># o FP file fingerprints data line only contain partial fingerprints data which</span>
1511 1498 <span class="c"># can&#39;t be used directly to create fingerprints bit-vector or vector objects</span>
1512 1499 <span class="c"># using functions available in FingerprintsStringUtil.pm module</span>
1513 1500 <span class="c">#</span>
1514 <a name="_GeneratePartialFingerprintsStringFromFingerprintsString-"></a>1501 <span class="k">sub </span><span class="m">_GeneratePartialFingerprintsStringFromFingerprintsString</span> <span class="s">{</span>
1515 1502 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1516 1503
1517 1504 <span class="i">$This</span>-&gt;{<span class="w">PartialFingerprintsString</span>} = <span class="q">&#39;&#39;</span><span class="sc">;</span>
1518 1505
1519 1506 <span class="k">if</span> <span class="s">(</span>!<span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>}<span class="s">)</span> <span class="s">{</span>
1520 1507 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1521 1508 <span class="s">}</span>
1522 1509
1523 1510 <span class="k">if</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsBitVectorStringMode</span>}<span class="s">)</span> <span class="s">{</span>
1524 1511 <span class="k">my</span><span class="s">(</span><span class="i">$VectorType</span><span class="cm">,</span> <span class="i">$Description</span><span class="cm">,</span> <span class="i">$Size</span><span class="cm">,</span> <span class="i">$BitStringFormat</span><span class="cm">,</span> <span class="i">$BitsOrder</span><span class="cm">,</span> <span class="i">$BitVectorString</span><span class="s">)</span><span class="sc">;</span>
1525 1512
1526 1513 <span class="s">(</span><span class="i">$VectorType</span><span class="cm">,</span> <span class="i">$Description</span><span class="cm">,</span> <span class="i">$Size</span><span class="cm">,</span> <span class="i">$BitStringFormat</span><span class="cm">,</span> <span class="i">$BitsOrder</span><span class="cm">,</span> <span class="i">$BitVectorString</span><span class="s">)</span> = <span class="i">Fingerprints::FingerprintsStringUtil::GetFingerprintsStringValues</span><span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>}<span class="s">)</span><span class="sc">;</span>
1527 1514 <span class="i">$This</span>-&gt;{<span class="w">PartialFingerprintsString</span>} = <span class="i">$BitVectorString</span><span class="sc">;</span>
1528 1515 <span class="s">}</span>
1529 1516 <span class="k">elsif</span> <span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsVectorStringMode</span>}<span class="s">)</span> <span class="s">{</span>
1530 1517 <span class="k">my</span><span class="s">(</span><span class="i">$FPStringDelim</span><span class="cm">,</span> <span class="i">$VectorType</span><span class="cm">,</span> <span class="i">$Description</span><span class="cm">,</span> <span class="i">$NumOfValues</span><span class="cm">,</span> <span class="i">$VectorValuesType</span><span class="cm">,</span> <span class="i">$VectorStringFormat</span><span class="cm">,</span> <span class="i">$VectorString1</span><span class="cm">,</span> <span class="i">$VectorString2</span><span class="cm">,</span> <span class="i">$VectorString</span><span class="s">)</span><span class="sc">;</span>
1531 1518
1532 1519 <span class="i">$FPStringDelim</span> = <span class="i">Fingerprints::FingerprintsStringUtil::GetFingeprintsStringDelimiter</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
1533 1520
1534 1521 <span class="s">(</span><span class="i">$VectorType</span><span class="cm">,</span> <span class="i">$Description</span><span class="cm">,</span> <span class="i">$NumOfValues</span><span class="cm">,</span> <span class="i">$VectorValuesType</span><span class="cm">,</span> <span class="i">$VectorStringFormat</span><span class="cm">,</span> <span class="i">$VectorString1</span><span class="cm">,</span> <span class="i">$VectorString2</span><span class="s">)</span> = <span class="i">Fingerprints::FingerprintsStringUtil::GetFingerprintsStringValues</span><span class="s">(</span><span class="i">$This</span>-&gt;{<span class="w">FingerprintsString</span>}<span class="s">)</span><span class="sc">;</span>
1535 1522 <span class="i">$VectorString</span> = <span class="i">TextUtil::IsEmpty</span><span class="s">(</span><span class="i">$VectorString2</span><span class="s">)</span> ? <span class="i">$VectorString1</span> <span class="co">:</span> <span class="q">&quot;${VectorString1}${FPStringDelim}${VectorString2}&quot;</span><span class="sc">;</span>
1536 1523
1537 1524 <span class="i">$This</span>-&gt;{<span class="w">PartialFingerprintsString</span>} = <span class="i">$NumOfValues</span> . <span class="i">$FPStringDelim</span> . <span class="i">$VectorString</span><span class="sc">;</span>
1538 1525 <span class="s">}</span>
1539 1526
1540 1527 <span class="k">return</span> <span class="i">$This</span><span class="sc">;</span>
1541 1528 <span class="s">}</span>
1542 1529
1543 1530 <span class="c"># Is it a fingerprints file?</span>
1544 <a name="IsFingerprintsFPFile-"></a>1531 <span class="k">sub </span><span class="m">IsFingerprintsFPFile ($;$)</span> <span class="s">{</span>
1545 1532 <span class="k">my</span><span class="s">(</span><span class="i">$FirstParameter</span><span class="cm">,</span> <span class="i">$SecondParameter</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1546 1533 <span class="k">my</span><span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">$FileName</span><span class="cm">,</span> <span class="i">$Status</span><span class="s">)</span><span class="sc">;</span>
1547 1534
1548 1535 <span class="k">if</span> <span class="s">(</span><span class="s">(</span><span class="i">@_</span> == <span class="n">2</span><span class="s">)</span> &amp;&amp; <span class="s">(</span><span class="i">_IsFingerprintsFPFileIO</span><span class="s">(</span><span class="i">$FirstParameter</span><span class="s">)</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
1549 1536 <span class="s">(</span><span class="i">$This</span><span class="cm">,</span> <span class="i">$FileName</span><span class="s">)</span> = <span class="s">(</span><span class="i">$FirstParameter</span><span class="cm">,</span> <span class="i">$SecondParameter</span><span class="s">)</span><span class="sc">;</span>
1550 1537 <span class="s">}</span>
1551 1538 <span class="k">else</span> <span class="s">{</span>
1552 1539 <span class="i">$FileName</span> = <span class="i">$FirstParameter</span><span class="sc">;</span>
1553 1540 <span class="s">}</span>
1554 1541
1555 1542 <span class="c"># Check file extension...</span>
1556 1543 <span class="i">$Status</span> = <span class="i">FileUtil::CheckFileType</span><span class="s">(</span><span class="i">$FileName</span><span class="cm">,</span> <span class="q">&quot;fpf fp&quot;</span><span class="s">)</span><span class="sc">;</span>
1557 1544
1558 1545 <span class="k">return</span> <span class="i">$Status</span><span class="sc">;</span>
1559 1546 <span class="s">}</span>
1560 1547
1561 1548 <span class="c"># Is it a FingerprintsFPFileIO object?</span>
1562 <a name="_IsFingerprintsFPFileIO-"></a>1549 <span class="k">sub </span><span class="m">_IsFingerprintsFPFileIO</span> <span class="s">{</span>
1563 1550 <span class="k">my</span><span class="s">(</span><span class="i">$Object</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
1564 1551
1565 1552 <span class="k">return</span> <span class="s">(</span><span class="i">Scalar::Util::blessed</span><span class="s">(</span><span class="i">$Object</span><span class="s">)</span> &amp;&amp; <span class="i">$Object</span><span class="i">-&gt;isa</span><span class="s">(</span><span class="i">$ClassName</span><span class="s">)</span><span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span> <span class="n">0</span><span class="sc">;</span>
1566 1553 <span class="s">}</span>
1567 1554
1568 <a name="EOF-"></a></pre>
1569 <p>&nbsp;</p>
1570 <br />
1571 <center>
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