Mercurial > repos > deepakjadmin > mayatool3_test3

annotate test.pl @ 3:e420415a1799 draft

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author deepakjadmin
date Wed, 20 Jan 2016 12:16:47 -0500
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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1 #!/usr/bin/perl -w
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2 use warnings;
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3 $out1 = $ARGV[0];
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4 $in1 = $ARGV[1];
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5 $fieldname = $ARGV[2];
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6 $idfiles = $ARGV[3];
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7
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8 open(FILE, $idfiles) or die "Can't read file 'filename' [$!]\n";
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9 @document = <FILE>;
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10 close (FILE);
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11 $strw = join(",",@document);
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12 $strw =~ tr/\r\n//d;
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13 $fieldValues = join(",",$fieldname,$strw);
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14 system("mayachemtools/bin/ExtractFromSDFiles.pl -m datafieldbylist -d $fieldValues -r $out1 -o $in1" );