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1 <html>
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2 <head>
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3 <title>MayaChemTools:Code:InfoTextFiles.pl</title>
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4 <meta http-equiv="content-type" content="text/html;charset=utf-8">
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5 <link rel="stylesheet" type="text/css" href="../../../css/MayaChemToolsCode.css">
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7 <body leftmargin="20" rightmargin="20" topmargin="10" bottommargin="10">
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8 <br/>
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9 <center>
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10 <a href="http://www.mayachemtools.org" title="MayaChemTools Home"><img src="../../../images/MayaChemToolsLogo.gif" border="0" alt="MayaChemTools"></a>
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11 </center>
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12 <br/>
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13 <pre>
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14 1 #!/usr/bin/perl -w
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15 2 <span class="c">#</span>
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16 3 <span class="c"># $RCSfile: InfoTextFiles.pl,v $</span>
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17 4 <span class="c"># $Date: 2015/02/28 20:46:20 $</span>
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18 5 <span class="c"># $Revision: 1.30 $</span>
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19 6 <span class="c">#</span>
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20 7 <span class="c"># Author: Manish Sud <msud@san.rr.com></span>
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21 8 <span class="c">#</span>
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22 9 <span class="c"># Copyright (C) 2015 Manish Sud. All rights reserved.</span>
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23 10 <span class="c">#</span>
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24 11 <span class="c"># This file is part of MayaChemTools.</span>
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25 12 <span class="c">#</span>
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26 13 <span class="c"># MayaChemTools is free software; you can redistribute it and/or modify it under</span>
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27 14 <span class="c"># the terms of the GNU Lesser General Public License as published by the Free</span>
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28 15 <span class="c"># Software Foundation; either version 3 of the License, or (at your option) any</span>
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29 16 <span class="c"># later version.</span>
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30 17 <span class="c">#</span>
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31 18 <span class="c"># MayaChemTools is distributed in the hope that it will be useful, but without</span>
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32 19 <span class="c"># any warranty; without even the implied warranty of merchantability of fitness</span>
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33 20 <span class="c"># for a particular purpose. See the GNU Lesser General Public License for more</span>
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34 21 <span class="c"># details.</span>
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35 22 <span class="c">#</span>
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36 23 <span class="c"># You should have received a copy of the GNU Lesser General Public License</span>
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37 24 <span class="c"># along with MayaChemTools; if not, see <http://www.gnu.org/licenses/> or</span>
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38 25 <span class="c"># write to the Free Software Foundation Inc., 59 Temple Place, Suite 330,</span>
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39 26 <span class="c"># Boston, MA, 02111-1307, USA.</span>
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40 27 <span class="c">#</span>
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41 28
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42 29 <span class="k">use</span> <span class="w">strict</span><span class="sc">;</span>
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43 30 <span class="k">use</span> <span class="w">FindBin</span><span class="sc">;</span> <span class="k">use</span> <span class="w">lib</span> <span class="q">"$FindBin::Bin/../lib"</span><span class="sc">;</span>
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44 31 <span class="k">use</span> <span class="w">Getopt::Long</span><span class="sc">;</span>
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45 32 <span class="k">use</span> <span class="w">File::Basename</span><span class="sc">;</span>
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46 33 <span class="k">use</span> <span class="w">Text::ParseWords</span><span class="sc">;</span>
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47 34 <span class="k">use</span> <span class="w">Benchmark</span><span class="sc">;</span>
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48 35 <span class="k">use</span> <span class="w">FileUtil</span><span class="sc">;</span>
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49 36 <span class="k">use</span> <span class="w">TextUtil</span><span class="sc">;</span>
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50 37
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51 38 <span class="k">my</span><span class="s">(</span><span class="i">$ScriptName</span><span class="cm">,</span> <span class="i">%Options</span><span class="cm">,</span> <span class="i">$StartTime</span><span class="cm">,</span> <span class="i">$EndTime</span><span class="cm">,</span> <span class="i">$TotalTime</span><span class="s">)</span><span class="sc">;</span>
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52 39
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53 40 <span class="c"># Autoflush STDOUT</span>
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54 41 <span class="i">$|</span> = <span class="n">1</span><span class="sc">;</span>
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55 42
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56 43 <span class="c"># Starting message...</span>
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57 44 <span class="i">$ScriptName</span> = <span class="i">basename</span><span class="s">(</span><span class="i">$0</span><span class="s">)</span><span class="sc">;</span>
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58 45 <span class="k">print</span> <span class="q">"\n$ScriptName: Starting...\n\n"</span><span class="sc">;</span>
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59 46 <span class="i">$StartTime</span> = <span class="w">new</span> <span class="w">Benchmark</span><span class="sc">;</span>
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60 47
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61 48 <span class="c"># Get the options and setup script...</span>
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62 49 <span class="i">SetupScriptUsage</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
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63 50 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">help</span>} || <span class="i">@ARGV</span> < <span class="n">1</span><span class="s">)</span> <span class="s">{</span>
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64 51 <span class="k">die</span> <span class="i">GetUsageFromPod</span><span class="s">(</span><span class="q">"$FindBin::Bin/$ScriptName"</span><span class="s">)</span><span class="sc">;</span>
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65 52 <span class="s">}</span>
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66 53
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67 54 <span class="k">my</span><span class="s">(</span><span class="i">@TextFilesList</span><span class="s">)</span><span class="sc">;</span>
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68 55 <span class="i">@TextFilesList</span> = <span class="i">ExpandFileNames</span><span class="s">(</span>\<span class="i">@ARGV</span><span class="cm">,</span> <span class="q">"csv tsv"</span><span class="s">)</span><span class="sc">;</span>
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69 56
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70 57 <span class="c"># Process options...</span>
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71 58 <span class="k">print</span> <span class="q">"Processing options...\n"</span><span class="sc">;</span>
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72 59 <span class="k">my</span><span class="s">(</span><span class="i">%OptionsInfo</span><span class="s">)</span><span class="sc">;</span>
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73 60 <span class="i">ProcessOptions</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
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74 61
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75 62 <span class="k">print</span> <span class="q">"Checking input text file(s)...\n"</span><span class="sc">;</span>
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76 63 <span class="k">my</span><span class="s">(</span><span class="i">%TextFilesInfo</span><span class="s">)</span><span class="sc">;</span>
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77 64 <span class="i">RetrieveTextFilesInfo</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
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78 65 <span class="i">ProcessColumnsInfo</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
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79 66
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80 67 <span class="c"># Generate output files...</span>
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81 68 <span class="k">my</span><span class="s">(</span><span class="i">$FileIndex</span><span class="s">)</span><span class="sc">;</span>
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82 69 <span class="k">if</span> <span class="s">(</span><span class="i">@TextFilesList</span> > <span class="n">1</span><span class="s">)</span> <span class="s">{</span>
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83 70 <span class="k">print</span> <span class="q">"\nProcessing text files...\n"</span><span class="sc">;</span>
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84 71 <span class="s">}</span>
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85 72 <span class="k">for</span> <span class="i">$FileIndex</span> <span class="s">(</span><span class="n">0</span> .. <span class="i">$#TextFilesList</span><span class="s">)</span> <span class="s">{</span>
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86 73 <span class="k">if</span> <span class="s">(</span><span class="i">$TextFilesInfo</span>{<span class="w">FileOkay</span>}[<span class="i">$FileIndex</span>]<span class="s">)</span> <span class="s">{</span>
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87 74 <span class="k">print</span> <span class="q">"\nProcessing file $TextFilesList[$FileIndex]...\n"</span><span class="sc">;</span>
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88 75 <span class="i">ListTextFileInfo</span><span class="s">(</span><span class="i">$FileIndex</span><span class="s">)</span><span class="sc">;</span>
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89 76 <span class="s">}</span>
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90 77 <span class="s">}</span>
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91 78 <span class="i">ListTotalSizeOfFiles</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span>
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92 79
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93 80 <span class="k">print</span> <span class="q">"\n$ScriptName:Done...\n\n"</span><span class="sc">;</span>
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94 81
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95 82 <span class="i">$EndTime</span> = <span class="w">new</span> <span class="w">Benchmark</span><span class="sc">;</span>
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96 83 <span class="i">$TotalTime</span> = <span class="w">timediff</span> <span class="s">(</span><span class="i">$EndTime</span><span class="cm">,</span> <span class="i">$StartTime</span><span class="s">)</span><span class="sc">;</span>
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97 84 <span class="k">print</span> <span class="q">"Total time: "</span><span class="cm">,</span> <span class="i">timestr</span><span class="s">(</span><span class="i">$TotalTime</span><span class="s">)</span><span class="cm">,</span> <span class="q">"\n"</span><span class="sc">;</span>
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98 85
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99 86 <span class="c">###############################################################################</span>
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100 87
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101 88 <span class="c"># List appropriate information...</span>
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102 <a name="ListTextFileInfo-"></a> 89 <span class="k">sub </span><span class="m">ListTextFileInfo</span> <span class="s">{</span>
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103 90 <span class="k">my</span><span class="s">(</span><span class="i">$Index</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
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104 91 <span class="k">my</span><span class="s">(</span><span class="i">$TextFile</span><span class="cm">,</span> <span class="i">$Line</span><span class="cm">,</span> <span class="i">$InDelim</span><span class="cm">,</span> <span class="i">$LineCount</span><span class="cm">,</span> <span class="i">$EmptyLinesCount</span><span class="cm">,</span> <span class="i">$EmptyColDataLinesCount</span><span class="cm">,</span> <span class="i">$GreaterThanMaxColLinesCount</span><span class="cm">,</span> <span class="i">$Label</span><span class="cm">,</span> <span class="i">$Value</span><span class="cm">,</span> <span class="i">$ColNum</span><span class="cm">,</span> <span class="i">$EmptyColValueFound</span><span class="cm">,</span> <span class="i">$PrintTextLine</span><span class="cm">,</span> <span class="i">$NonNumericalDataFound</span><span class="cm">,</span> <span class="i">@ColLabels</span><span class="cm">,</span> <span class="i">@LineWords</span><span class="cm">,</span> <span class="i">%EmptyColValuesCountMap</span><span class="cm">,</span> <span class="i">%NonEmptyColValuesCountMap</span><span class="cm">,</span> <span class="i">%SpecifiedNonNumericalColValuesCountMap</span><span class="cm">,</span> <span class="i">%NonNumericalColValuesCountMap</span><span class="cm">,</span> <span class="i">%NumericalColValuesCountMap</span><span class="cm">,</span><span class="s">)</span><span class="sc">;</span>
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105 92
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106 93 <span class="i">$TextFile</span> = <span class="i">$TextFilesList</span>[<span class="i">$Index</span>]<span class="sc">;</span>
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107 94 <span class="i">$InDelim</span> = <span class="i">$TextFilesInfo</span>{<span class="w">InDelim</span>}[<span class="i">$Index</span>]<span class="sc">;</span>
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108 95 <span class="i">@ColLabels</span> = <span class="i">@</span>{<span class="i">$TextFilesInfo</span>{<span class="w">ColLabels</span>}[<span class="i">$Index</span>]}<span class="sc">;</span>
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109 96
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110 97 <span class="k">open</span> <span class="w">TEXTFILE</span><span class="cm">,</span> <span class="q">"$TextFile"</span> <span class="k">or</span> <span class="k">die</span> <span class="q">"Error: Can't open $TextFile: $! \n"</span><span class="sc">;</span>
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111 98
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112 99 <span class="i">$LineCount</span> = <span class="n">0</span><span class="sc">;</span>
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113 100 <span class="i">$EmptyLinesCount</span> = <span class="n">0</span><span class="sc">;</span>
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114 101 <span class="i">$EmptyColDataLinesCount</span> = <span class="n">0</span><span class="sc">;</span>
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115 102 <span class="i">$GreaterThanMaxColLinesCount</span> = <span class="n">0</span><span class="sc">;</span>
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116 103
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117 104 <span class="i">%EmptyColValuesCountMap</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
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118 105 <span class="i">%NonEmptyColValuesCountMap</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
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119 106 <span class="i">%SpecifiedNonNumericalColValuesCountMap</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
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120 107 <span class="i">%NonNumericalColValuesCountMap</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
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121 108 <span class="i">%NumericalColValuesCountMap</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
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122 109
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123 110 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ParseLines</span>}<span class="s">)</span> <span class="s">{</span>
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124 111 <span class="c"># Skip over column labels from old file...</span>
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125 112 <span class="k">if</span> <span class="s">(</span><span class="q"><TEXTFILE></span><span class="s">)</span> <span class="s">{</span>
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126 113 <span class="i">$LineCount</span>++<span class="sc">;</span>
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127 114 <span class="j">LINE:</span> <span class="k">while</span> <span class="s">(</span><span class="i">$Line</span> = <span class="q"><TEXTFILE></span><span class="s">)</span> <span class="s">{</span>
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128 115 <span class="i">$LineCount</span>++<span class="sc">;</span>
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129 116 <span class="i">$PrintTextLine</span> = <span class="n">0</span><span class="sc">;</span>
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130 117 <span class="i">$Line</span> =~ <span class="q">s/(\r\n)|(\r)|\n//g</span><span class="sc">;</span>
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131 118 <span class="i">@LineWords</span> = <span class="i">quotewords</span><span class="s">(</span><span class="i">$InDelim</span><span class="cm">,</span> <span class="n">0</span><span class="cm">,</span> <span class="i">$Line</span><span class="s">)</span><span class="sc">;</span>
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132 119 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">CountEmpty</span>}<span class="s">)</span> <span class="s">{</span>
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133 120 <span class="c"># Count lines with no data...</span>
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134 121 <span class="k">if</span> <span class="s">(</span>!<span class="i">@LineWords</span><span class="s">)</span> <span class="s">{</span>
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135 122 <span class="i">$EmptyLinesCount</span>++<span class="sc">;</span>
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136 123 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">DetailLevel</span>} >= <span class="n">2</span><span class="s">)</span> <span class="s">{</span>
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137 124 <span class="k">print</span> <span class="q">"Line number $LineCount is empty...\n"</span><span class="sc">;</span>
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138 125 <span class="s">}</span>
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139 126 <span class="k">next</span> <span class="j">LINE</span><span class="sc">;</span>
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140 127 <span class="s">}</span>
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141 128 <span class="c"># Count lines with empty data for some columns...</span>
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142 129 <span class="i">$EmptyColValueFound</span> = <span class="n">0</span><span class="sc">;</span>
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143 130 <span class="j">VALUE:</span> <span class="k">for</span> <span class="i">$Value</span> <span class="s">(</span><span class="i">@LineWords</span><span class="s">)</span> <span class="s">{</span>
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144 131 <span class="k">if</span> <span class="s">(</span>!<span class="i">IsNotEmpty</span><span class="s">(</span><span class="i">$Value</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
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145 132 <span class="i">$EmptyColValueFound</span> = <span class="n">1</span><span class="sc">;</span>
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146 133 <span class="k">next</span> <span class="j">VALUE</span><span class="sc">;</span>
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147 134 <span class="s">}</span>
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148 135 <span class="s">}</span>
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149 136 <span class="k">if</span> <span class="s">(</span><span class="i">$EmptyColValueFound</span><span class="s">)</span> <span class="s">{</span>
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150 137 <span class="i">$EmptyColDataLinesCount</span>++<span class="sc">;</span>
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151 138 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">DetailLevel</span>} >= <span class="n">2</span><span class="s">)</span> <span class="s">{</span>
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152 139 <span class="k">print</span> <span class="q">"Line number $LineCount contains empty column value(s)...\n"</span><span class="sc">;</span>
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153 140 <span class="s">}</span>
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154 141 <span class="i">$PrintTextLine</span> = <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">DetailLevel</span>} >= <span class="n">3</span><span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span> <span class="n">0</span><span class="sc">;</span>
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155 142 <span class="s">}</span>
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156 143 <span class="c"># Count lines with columns greater than the column label line...</span>
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157 144 <span class="k">if</span> <span class="s">(</span><span class="i">@LineWords</span> > <span class="i">@ColLabels</span><span class="s">)</span> <span class="s">{</span>
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158 145 <span class="i">$GreaterThanMaxColLinesCount</span>++<span class="sc">;</span>
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159 146 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">DetailLevel</span>} >= <span class="n">2</span><span class="s">)</span> <span class="s">{</span>
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160 147 <span class="k">print</span> <span class="q">"Line number $LineCount contains more than "</span><span class="cm">,</span> <span class="k">scalar</span><span class="s">(</span><span class="i">@ColLabels</span><span class="s">)</span><span class="cm">,</span> <span class="q">" columns...\n"</span><span class="sc">;</span>
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161 148 <span class="s">}</span>
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162 149 <span class="i">$PrintTextLine</span> = <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">DetailLevel</span>} >= <span class="n">3</span><span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span> <span class="n">0</span><span class="sc">;</span>
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163 150 <span class="s">}</span>
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164 151 <span class="c"># Count empty values for each coulmn...</span>
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165 152 <span class="k">for</span> <span class="i">$ColNum</span> <span class="s">(</span><span class="n">0</span> .. <span class="i">$#LineWords</span><span class="s">)</span> <span class="s">{</span>
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166 153 <span class="k">if</span> <span class="s">(</span><span class="i">$ColNum</span> < <span class="i">@ColLabels</span><span class="s">)</span> <span class="s">{</span>
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167 154 <span class="i">$Label</span> = <span class="i">$ColLabels</span>[<span class="i">$ColNum</span>]<span class="sc">;</span>
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168 155 <span class="k">if</span> <span class="s">(</span><span class="i">IsNotEmpty</span><span class="s">(</span><span class="i">$LineWords</span>[<span class="i">$ColNum</span>]<span class="s">)</span><span class="s">)</span> <span class="s">{</span>
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169 156 <span class="k">if</span> <span class="s">(</span><span class="k">exists</span><span class="s">(</span><span class="i">$NonEmptyColValuesCountMap</span>{<span class="i">$Label</span>}<span class="s">)</span><span class="s">)</span> <span class="s">{</span>
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170 157 <span class="i">$NonEmptyColValuesCountMap</span>{<span class="i">$Label</span>} += <span class="n">1</span><span class="sc">;</span>
|
|
|
171 158 <span class="s">}</span>
|
|
|
172 159 <span class="k">else</span> <span class="s">{</span>
|
|
|
173 160 <span class="i">$NonEmptyColValuesCountMap</span>{<span class="i">$Label</span>} = <span class="n">1</span><span class="sc">;</span>
|
|
|
174 161 <span class="s">}</span>
|
|
|
175 162 <span class="s">}</span>
|
|
|
176 163 <span class="k">else</span> <span class="s">{</span>
|
|
|
177 164 <span class="i">$PrintTextLine</span> = <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">DetailLevel</span>} >= <span class="n">3</span><span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span> <span class="n">0</span><span class="sc">;</span>
|
|
|
178 165 <span class="k">if</span> <span class="s">(</span><span class="k">exists</span><span class="s">(</span><span class="i">$EmptyColValuesCountMap</span>{<span class="i">$Label</span>}<span class="s">)</span><span class="s">)</span> <span class="s">{</span>
|
|
|
179 166 <span class="i">$EmptyColValuesCountMap</span>{<span class="i">$Label</span>} += <span class="n">1</span><span class="sc">;</span>
|
|
|
180 167 <span class="s">}</span>
|
|
|
181 168 <span class="k">else</span> <span class="s">{</span>
|
|
|
182 169 <span class="i">$EmptyColValuesCountMap</span>{<span class="i">$Label</span>} = <span class="n">1</span><span class="sc">;</span>
|
|
|
183 170 <span class="s">}</span>
|
|
|
184 171 <span class="s">}</span>
|
|
|
185 172 <span class="s">}</span>
|
|
|
186 173 <span class="s">}</span>
|
|
|
187 174 <span class="s">}</span>
|
|
|
188 175 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">CheckData</span>}<span class="s">)</span> <span class="s">{</span>
|
|
|
189 176 <span class="k">for</span> <span class="i">$ColNum</span> <span class="s">(</span><span class="n">0</span> .. <span class="i">$#LineWords</span><span class="s">)</span> <span class="s">{</span>
|
|
|
190 177 <span class="k">if</span> <span class="s">(</span><span class="i">$ColNum</span> < <span class="i">@ColLabels</span><span class="s">)</span> <span class="s">{</span>
|
|
|
191 178 <span class="k">if</span> <span class="s">(</span><span class="i">IsNumerical</span><span class="s">(</span><span class="i">$LineWords</span>[<span class="i">$ColNum</span>]<span class="s">)</span><span class="s">)</span> <span class="s">{</span>
|
|
|
192 179 <span class="i">$Label</span> = <span class="i">$ColLabels</span>[<span class="i">$ColNum</span>]<span class="sc">;</span>
|
|
|
193 180 <span class="k">if</span> <span class="s">(</span><span class="k">exists</span><span class="s">(</span><span class="i">$NumericalColValuesCountMap</span>{<span class="i">$Label</span>}<span class="s">)</span><span class="s">)</span> <span class="s">{</span>
|
|
|
194 181 <span class="i">$NumericalColValuesCountMap</span>{<span class="i">$Label</span>} += <span class="n">1</span><span class="sc">;</span>
|
|
|
195 182 <span class="s">}</span>
|
|
|
196 183 <span class="k">else</span> <span class="s">{</span>
|
|
|
197 184 <span class="i">$NumericalColValuesCountMap</span>{<span class="i">$Label</span>} = <span class="n">1</span><span class="sc">;</span>
|
|
|
198 185 <span class="s">}</span>
|
|
|
199 186 <span class="s">}</span>
|
|
|
200 187 <span class="k">else</span> <span class="s">{</span>
|
|
|
201 188 <span class="i">$Label</span> = <span class="i">$ColLabels</span>[<span class="i">$ColNum</span>]<span class="sc">;</span>
|
|
|
202 189 <span class="k">if</span> <span class="s">(</span><span class="i">IsNotEmpty</span><span class="s">(</span><span class="i">$LineWords</span>[<span class="i">$ColNum</span>]<span class="s">)</span><span class="s">)</span> <span class="s">{</span>
|
|
|
203 190 <span class="k">if</span> <span class="s">(</span><span class="k">exists</span><span class="s">(</span><span class="i">$NonNumericalColValuesCountMap</span>{<span class="i">$Label</span>}<span class="s">)</span><span class="s">)</span> <span class="s">{</span>
|
|
|
204 191 <span class="i">$NonNumericalColValuesCountMap</span>{<span class="i">$Label</span>} += <span class="n">1</span><span class="sc">;</span>
|
|
|
205 192 <span class="s">}</span>
|
|
|
206 193 <span class="k">else</span> <span class="s">{</span>
|
|
|
207 194 <span class="i">$NonNumericalColValuesCountMap</span>{<span class="i">$Label</span>} = <span class="n">1</span><span class="sc">;</span>
|
|
|
208 195 <span class="s">}</span>
|
|
|
209 196 <span class="s">}</span>
|
|
|
210 197 <span class="s">}</span>
|
|
|
211 198 <span class="s">}</span>
|
|
|
212 199 <span class="s">}</span>
|
|
|
213 200 <span class="s">}</span>
|
|
|
214 201 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">CheckNumericalData</span>}<span class="s">)</span> <span class="s">{</span>
|
|
|
215 202 <span class="i">$NonNumericalDataFound</span> = <span class="n">0</span><span class="sc">;</span>
|
|
|
216 203 <span class="k">for</span> <span class="i">$ColNum</span> <span class="s">(</span><span class="i">@</span>{<span class="i">$TextFilesInfo</span>{<span class="w">NumericalDataColNums</span>}[<span class="i">$Index</span>]}<span class="s">)</span> <span class="s">{</span>
|
|
|
217 204 <span class="k">if</span> <span class="s">(</span><span class="i">$ColNum</span> < <span class="i">@LineWords</span><span class="s">)</span> <span class="s">{</span>
|
|
|
218 205 <span class="k">if</span> <span class="s">(</span>!<span class="i">IsNumerical</span><span class="s">(</span><span class="i">$LineWords</span>[<span class="i">$ColNum</span>]<span class="s">)</span><span class="s">)</span> <span class="s">{</span>
|
|
|
219 206 <span class="i">$NonNumericalDataFound</span> = <span class="n">1</span><span class="sc">;</span>
|
|
|
220 207 <span class="i">$Label</span> = <span class="i">$ColLabels</span>[<span class="i">$ColNum</span>]<span class="sc">;</span>
|
|
|
221 208 <span class="k">if</span> <span class="s">(</span><span class="k">exists</span><span class="s">(</span><span class="i">$SpecifiedNonNumericalColValuesCountMap</span>{<span class="i">$Label</span>}<span class="s">)</span><span class="s">)</span> <span class="s">{</span>
|
|
|
222 209 <span class="i">$SpecifiedNonNumericalColValuesCountMap</span>{<span class="i">$Label</span>} += <span class="n">1</span><span class="sc">;</span>
|
|
|
223 210 <span class="s">}</span>
|
|
|
224 211 <span class="k">else</span> <span class="s">{</span>
|
|
|
225 212 <span class="i">$SpecifiedNonNumericalColValuesCountMap</span>{<span class="i">$Label</span>} = <span class="n">1</span><span class="sc">;</span>
|
|
|
226 213 <span class="s">}</span>
|
|
|
227 214 <span class="s">}</span>
|
|
|
228 215 <span class="s">}</span>
|
|
|
229 216 <span class="s">}</span>
|
|
|
230 217 <span class="k">if</span> <span class="s">(</span><span class="i">$NonNumericalDataFound</span><span class="s">)</span> <span class="s">{</span>
|
|
|
231 218 <span class="i">$PrintTextLine</span> = <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">DetailLevel</span>} >= <span class="n">3</span><span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span> <span class="n">0</span><span class="sc">;</span>
|
|
|
232 219 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">DetailLevel</span>} >=<span class="n">2</span> <span class="s">)</span> <span class="s">{</span>
|
|
|
233 220 <span class="k">print</span> <span class="q">"Line number $LineCount contains non-numerical data for some specified column(s)...\n"</span><span class="sc">;</span>
|
|
|
234 221 <span class="s">}</span>
|
|
|
235 222 <span class="s">}</span>
|
|
|
236 223 <span class="s">}</span>
|
|
|
237 224 <span class="k">if</span> <span class="s">(</span><span class="i">$PrintTextLine</span><span class="s">)</span> <span class="s">{</span>
|
|
|
238 225 <span class="k">print</span> <span class="q">"Line $LineCount: $Line\n\n"</span><span class="sc">;</span>
|
|
|
239 226 <span class="s">}</span>
|
|
|
240 227 <span class="s">}</span>
|
|
|
241 228 <span class="s">}</span>
|
|
|
242 229 <span class="s">}</span>
|
|
|
243 230 <span class="k">else</span> <span class="s">{</span>
|
|
|
244 231 <span class="k">while</span> <span class="s">(</span><span class="q"><TEXTFILE></span><span class="s">)</span> <span class="s">{</span>
|
|
|
245 232 <span class="i">$LineCount</span>++<span class="sc">;</span>
|
|
|
246 233 <span class="s">}</span>
|
|
|
247 234 <span class="s">}</span>
|
|
|
248 235 <span class="k">close</span> <span class="w">TEXTFILE</span><span class="sc">;</span>
|
|
|
249 236
|
|
|
250 237 <span class="k">print</span> <span class="q">"\nNumber of lines: $LineCount\n"</span><span class="sc">;</span>
|
|
|
251 238 <span class="k">print</span> <span class="q">"Number of columns: $TextFilesInfo{ColCount}[$Index]\n"</span><span class="sc">;</span>
|
|
|
252 239 <span class="k">print</span> <span class="q">"Column labels: "</span><span class="cm">,</span> <span class="i">JoinWords</span><span class="s">(</span>\<span class="i">@ColLabels</span><span class="cm">,</span> <span class="q">", "</span><span class="cm">,</span> <span class="n">1</span><span class="s">)</span><span class="cm">,</span> <span class="q">"\n"</span><span class="sc">;</span>
|
|
|
253 240
|
|
|
254 241 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">CountEmpty</span>}<span class="s">)</span> <span class="s">{</span>
|
|
|
255 242 <span class="k">print</span> <span class="q">"\nNumber of lines with no data: $EmptyLinesCount\n"</span><span class="sc">;</span>
|
|
|
256 243 <span class="k">print</span> <span class="q">"Number of lines with some missing column data: $EmptyColDataLinesCount\n"</span><span class="sc">;</span>
|
|
|
257 244 <span class="k">print</span> <span class="q">"Number of lines containing greater than "</span><span class="cm">,</span> <span class="k">scalar</span><span class="s">(</span><span class="i">@ColLabels</span><span class="s">)</span><span class="cm">,</span> <span class="q">" columns: $GreaterThanMaxColLinesCount\n"</span><span class="sc">;</span>
|
|
|
258 245 <span class="i">PrintDataInformation</span><span class="s">(</span><span class="q">"Number of non-empty values for each column(s)"</span><span class="cm">,</span> \<span class="i">@ColLabels</span><span class="cm">,</span> \<span class="i">%NonEmptyColValuesCountMap</span><span class="s">)</span><span class="sc">;</span>
|
|
|
259 246 <span class="i">PrintDataInformation</span><span class="s">(</span><span class="q">"Number of empty values for each column(s)"</span><span class="cm">,</span> \<span class="i">@ColLabels</span><span class="cm">,</span> \<span class="i">%EmptyColValuesCountMap</span><span class="s">)</span><span class="sc">;</span>
|
|
|
260 247 <span class="s">}</span>
|
|
|
261 248
|
|
|
262 249 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">CheckData</span>}<span class="s">)</span> <span class="s">{</span>
|
|
|
263 250 <span class="k">print</span> <span class="q">"\n"</span><span class="sc">;</span>
|
|
|
264 251 <span class="i">PrintDataInformation</span><span class="s">(</span><span class="q">"Number of non-numerical data values for each column(s)"</span><span class="cm">,</span> \<span class="i">@ColLabels</span><span class="cm">,</span> \<span class="i">%NonNumericalColValuesCountMap</span><span class="s">)</span><span class="sc">;</span>
|
|
|
265 252 <span class="i">PrintDataInformation</span><span class="s">(</span><span class="q">"Number of numerical data values for each column(s)"</span><span class="cm">,</span> \<span class="i">@ColLabels</span><span class="cm">,</span> \<span class="i">%NumericalColValuesCountMap</span><span class="s">)</span><span class="sc">;</span>
|
|
|
266 253 <span class="k">print</span> <span class="q">"\n"</span><span class="sc">;</span>
|
|
|
267 254 <span class="s">}</span>
|
|
|
268 255
|
|
|
269 256 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">CheckNumericalData</span>} && <span class="i">@</span>{<span class="i">$TextFilesInfo</span>{<span class="w">NumericalDataColLabels</span>}[<span class="i">$Index</span>]}<span class="s">)</span> <span class="s">{</span>
|
|
|
270 257 <span class="i">PrintDataInformation</span><span class="s">(</span><span class="q">"Number of non-numerical data values for each column(s)"</span><span class="cm">,</span> \<span class="i">@</span>{<span class="i">$TextFilesInfo</span>{<span class="w">NumericalDataColLabels</span>}[<span class="i">$Index</span>]}<span class="cm">,</span> \<span class="i">%SpecifiedNonNumericalColValuesCountMap</span><span class="s">)</span><span class="sc">;</span>
|
|
|
271 258 <span class="s">}</span>
|
|
|
272 259
|
|
|
273 260 <span class="c"># File size and modification information...</span>
|
|
|
274 261 <span class="k">print</span> <span class="q">"\nFile size: "</span><span class="cm">,</span> <span class="i">FormatFileSize</span><span class="s">(</span><span class="i">$TextFilesInfo</span>{<span class="w">FileSize</span>}[<span class="i">$Index</span>]<span class="s">)</span><span class="cm">,</span> <span class="q">" \n"</span><span class="sc">;</span>
|
|
|
275 262 <span class="k">print</span> <span class="q">"Last modified: "</span><span class="cm">,</span> <span class="i">$TextFilesInfo</span>{<span class="w">FileLastModified</span>}[<span class="i">$Index</span>]<span class="cm">,</span> <span class="q">" \n"</span><span class="sc">;</span>
|
|
|
276 263 <span class="s">}</span>
|
|
|
277 264
|
|
|
278 265 <span class="c"># Total size of all the fiels...</span>
|
|
|
279 <a name="ListTotalSizeOfFiles-"></a> 266 <span class="k">sub </span><span class="m">ListTotalSizeOfFiles</span> <span class="s">{</span>
|
|
|
280 267 <span class="k">my</span><span class="s">(</span><span class="i">$FileOkayCount</span><span class="cm">,</span> <span class="i">$TotalSize</span><span class="cm">,</span> <span class="i">$Index</span><span class="s">)</span><span class="sc">;</span>
|
|
|
281 268
|
|
|
282 269 <span class="i">$FileOkayCount</span> = <span class="n">0</span><span class="sc">;</span>
|
|
|
283 270 <span class="i">$TotalSize</span> = <span class="n">0</span><span class="sc">;</span>
|
|
|
284 271
|
|
|
285 272 <span class="k">for</span> <span class="i">$Index</span> <span class="s">(</span><span class="n">0</span> .. <span class="i">$#TextFilesList</span><span class="s">)</span> <span class="s">{</span>
|
|
|
286 273 <span class="k">if</span> <span class="s">(</span><span class="i">$TextFilesInfo</span>{<span class="w">FileOkay</span>}[<span class="i">$Index</span>]<span class="s">)</span> <span class="s">{</span>
|
|
|
287 274 <span class="i">$FileOkayCount</span>++<span class="sc">;</span>
|
|
|
288 275 <span class="i">$TotalSize</span> += <span class="i">$TextFilesInfo</span>{<span class="w">FileSize</span>}[<span class="i">$Index</span>]<span class="sc">;</span>
|
|
|
289 276 <span class="s">}</span>
|
|
|
290 277 <span class="s">}</span>
|
|
|
291 278 <span class="k">if</span> <span class="s">(</span><span class="i">$FileOkayCount</span> > <span class="n">1</span><span class="s">)</span> <span class="s">{</span>
|
|
|
292 279 <span class="k">print</span> <span class="q">"\nTotal size of $FileOkayCount files: "</span><span class="cm">,</span> <span class="i">FormatFileSize</span><span class="s">(</span><span class="i">$TotalSize</span><span class="s">)</span><span class="cm">,</span> <span class="q">"\n"</span><span class="sc">;</span>
|
|
|
293 280 <span class="s">}</span>
|
|
|
294 281 <span class="s">}</span>
|
|
|
295 282
|
|
|
296 283 <span class="c"># List data information...</span>
|
|
|
297 <a name="PrintDataInformation-"></a> 284 <span class="k">sub </span><span class="m">PrintDataInformation</span> <span class="s">{</span>
|
|
|
298 285 <span class="k">my</span><span class="s">(</span><span class="i">$InfoLabel</span><span class="cm">,</span> <span class="i">$DataLabelRef</span><span class="cm">,</span> <span class="i">$DataLabelToValueMapRef</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span>
|
|
|
299 286 <span class="k">my</span><span class="s">(</span><span class="i">$Line</span><span class="cm">,</span> <span class="i">$Label</span><span class="s">)</span><span class="sc">;</span>
|
|
|
300 287
|
|
|
301 288 <span class="i">$Line</span> = <span class="q">""</span><span class="sc">;</span>
|
|
|
302 289 <span class="k">for</span> <span class="i">$Label</span> <span class="s">(</span><span class="i">@</span>{<span class="i">$DataLabelRef</span>}<span class="s">)</span> <span class="s">{</span>
|
|
|
303 290 <span class="i">$Line</span> .= <span class="q">" \"$Label\" - "</span> . <span class="s">(</span><span class="k">exists</span><span class="s">(</span><span class="i">$DataLabelToValueMapRef</span>->{<span class="i">$Label</span>}<span class="s">)</span> ? <span class="i">$DataLabelToValueMapRef</span>->{<span class="i">$Label</span>} <span class="co">:</span> <span class="n">0</span><span class="s">)</span> . <span class="q">","</span><span class="sc">;</span>
|
|
|
304 291 <span class="s">}</span>
|
|
|
305 292 <span class="i">$Line</span> =~ <span class="q">s/\,$//g</span><span class="sc">;</span>
|
|
|
306 293 <span class="k">print</span> <span class="q">"$InfoLabel: $Line\n"</span><span class="sc">;</span>
|
|
|
307 294 <span class="s">}</span>
|
|
|
308 295
|
|
|
309 296 <span class="c"># Retrieve information about input text files...</span>
|
|
|
310 <a name="RetrieveTextFilesInfo-"></a> 297 <span class="k">sub </span><span class="m">RetrieveTextFilesInfo</span> <span class="s">{</span>
|
|
|
311 298 <span class="k">my</span><span class="s">(</span><span class="i">$Index</span><span class="cm">,</span> <span class="i">$TextFile</span><span class="cm">,</span> <span class="i">$FileDir</span><span class="cm">,</span> <span class="i">$FileName</span><span class="cm">,</span> <span class="i">$FileExt</span><span class="cm">,</span> <span class="i">$InDelim</span><span class="cm">,</span> <span class="i">$Line</span><span class="cm">,</span> <span class="i">@ColLabels</span><span class="cm">,</span> <span class="i">$ColNum</span><span class="cm">,</span> <span class="i">$ColLabel</span><span class="cm">,</span> <span class="i">$ModifiedTimeString</span><span class="cm">,</span> <span class="i">$ModifiedDateString</span><span class="s">)</span><span class="sc">;</span>
|
|
|
312 299
|
|
|
313 300 <span class="i">%TextFilesInfo</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
|
|
|
314 301 <span class="i">@</span>{<span class="i">$TextFilesInfo</span>{<span class="w">FileOkay</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
|
|
|
315 302 <span class="i">@</span>{<span class="i">$TextFilesInfo</span>{<span class="w">ColCount</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
|
|
|
316 303 <span class="i">@</span>{<span class="i">$TextFilesInfo</span>{<span class="w">ColLabels</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
|
|
|
317 304 <span class="i">@</span>{<span class="i">$TextFilesInfo</span>{<span class="w">ColLabelToNumMap</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
|
|
|
318 305 <span class="i">@</span>{<span class="i">$TextFilesInfo</span>{<span class="w">InDelim</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
|
|
|
319 306 <span class="i">@</span>{<span class="i">$TextFilesInfo</span>{<span class="w">FileSize</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
|
|
|
320 307 <span class="i">@</span>{<span class="i">$TextFilesInfo</span>{<span class="w">FileLastModified</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
|
|
|
321 308
|
|
|
322 309 <span class="j">FILELIST:</span> <span class="k">for</span> <span class="i">$Index</span> <span class="s">(</span><span class="n">0</span> .. <span class="i">$#TextFilesList</span><span class="s">)</span> <span class="s">{</span>
|
|
|
323 310 <span class="i">$TextFile</span> = <span class="i">$TextFilesList</span>[<span class="i">$Index</span>]<span class="sc">;</span>
|
|
|
324 311
|
|
|
325 312 <span class="i">$TextFilesInfo</span>{<span class="w">FileOkay</span>}[<span class="i">$Index</span>] = <span class="n">0</span><span class="sc">;</span>
|
|
|
326 313 <span class="i">$TextFilesInfo</span>{<span class="w">ColCount</span>}[<span class="i">$Index</span>] = <span class="n">0</span><span class="sc">;</span>
|
|
|
327 314 <span class="i">$TextFilesInfo</span>{<span class="w">InDelim</span>}[<span class="i">$Index</span>] = <span class="q">""</span><span class="sc">;</span>
|
|
|
328 315 <span class="i">$TextFilesInfo</span>{<span class="w">FileSize</span>}[<span class="i">$Index</span>] = <span class="n">0</span><span class="sc">;</span>
|
|
|
329 316 <span class="i">$TextFilesInfo</span>{<span class="w">FileLastModified</span>}[<span class="i">$Index</span>] = <span class="q">''</span><span class="sc">;</span>
|
|
|
330 317 <span class="i">@</span>{<span class="i">$TextFilesInfo</span>{<span class="w">ColLabels</span>}[<span class="i">$Index</span>]} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
|
|
|
331 318 <span class="i">%</span>{<span class="i">$TextFilesInfo</span>{<span class="w">ColLabelToNumMap</span>}[<span class="i">$Index</span>]} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
|
|
|
332 319
|
|
|
333 320 <span class="k">if</span> <span class="s">(</span>!<span class="s">(</span><span class="k">-e</span> <span class="i">$TextFile</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
|
|
|
334 321 <span class="k">warn</span> <span class="q">"Warning: Ignoring file $TextFile: It doesn't exist\n"</span><span class="sc">;</span>
|
|
|
335 322 <span class="k">next</span> <span class="j">FILELIST</span><span class="sc">;</span>
|
|
|
336 323 <span class="s">}</span>
|
|
|
337 324 <span class="k">if</span> <span class="s">(</span>!<span class="i">CheckFileType</span><span class="s">(</span><span class="i">$TextFile</span><span class="cm">,</span> <span class="q">"csv tsv"</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
|
|
|
338 325 <span class="k">warn</span> <span class="q">"Warning: Ignoring file $TextFile: It's not a csv or tsv file\n"</span><span class="sc">;</span>
|
|
|
339 326 <span class="k">next</span> <span class="j">FILELIST</span><span class="sc">;</span>
|
|
|
340 327 <span class="s">}</span>
|
|
|
341 328 <span class="s">(</span><span class="i">$FileDir</span><span class="cm">,</span> <span class="i">$FileName</span><span class="cm">,</span> <span class="i">$FileExt</span><span class="s">)</span> = <span class="i">ParseFileName</span><span class="s">(</span><span class="i">$TextFile</span><span class="s">)</span><span class="sc">;</span>
|
|
|
342 329 <span class="k">if</span> <span class="s">(</span><span class="i">$FileExt</span> =~ <span class="q">/^tsv$/i</span><span class="s">)</span> <span class="s">{</span>
|
|
|
343 330 <span class="i">$InDelim</span> = <span class="q">"\t"</span><span class="sc">;</span>
|
|
|
344 331 <span class="s">}</span>
|
|
|
345 332 <span class="k">else</span> <span class="s">{</span>
|
|
|
346 333 <span class="i">$InDelim</span> = <span class="q">"\,"</span><span class="sc">;</span>
|
|
|
347 334 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">InDelim</span>} !~ <span class="q">/^(comma|semicolon)$/i</span><span class="s">)</span> <span class="s">{</span>
|
|
|
348 335 <span class="k">warn</span> <span class="q">"Warning: Ignoring file $TextFile: The value specified, $OptionsInfo{InDelim}, for option \"--indelim\" is not valid for csv files\n"</span><span class="sc">;</span>
|
|
|
349 336 <span class="k">next</span> <span class="j">FILELIST</span><span class="sc">;</span>
|
|
|
350 337 <span class="s">}</span>
|
|
|
351 338 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">InDelim</span>} =~ <span class="q">/^semicolon$/i</span><span class="s">)</span> <span class="s">{</span>
|
|
|
352 339 <span class="i">$InDelim</span> = <span class="q">"\;"</span><span class="sc">;</span>
|
|
|
353 340 <span class="s">}</span>
|
|
|
354 341 <span class="s">}</span>
|
|
|
355 342
|
|
|
356 343 <span class="k">if</span> <span class="s">(</span>!<span class="k">open</span> <span class="w">TEXTFILE</span><span class="cm">,</span> <span class="q">"$TextFile"</span><span class="s">)</span> <span class="s">{</span>
|
|
|
357 344 <span class="k">warn</span> <span class="q">"Warning: Ignoring file $TextFile: Couldn't open it: $! \n"</span><span class="sc">;</span>
|
|
|
358 345 <span class="k">next</span> <span class="j">FILELIST</span><span class="sc">;</span>
|
|
|
359 346 <span class="s">}</span>
|
|
|
360 347
|
|
|
361 348 <span class="i">$Line</span> = <span class="i">GetTextLine</span><span class="s">(</span>\<span class="i">*TEXTFILE</span><span class="s">)</span><span class="sc">;</span>
|
|
|
362 349 <span class="i">@ColLabels</span> = <span class="i">quotewords</span><span class="s">(</span><span class="i">$InDelim</span><span class="cm">,</span> <span class="n">0</span><span class="cm">,</span> <span class="i">$Line</span><span class="s">)</span><span class="sc">;</span>
|
|
|
363 350 <span class="k">close</span> <span class="w">TEXTFILE</span><span class="sc">;</span>
|
|
|
364 351
|
|
|
365 352 <span class="i">$TextFilesInfo</span>{<span class="w">FileOkay</span>}[<span class="i">$Index</span>] = <span class="n">1</span><span class="sc">;</span>
|
|
|
366 353 <span class="i">$TextFilesInfo</span>{<span class="w">InDelim</span>}[<span class="i">$Index</span>] = <span class="i">$InDelim</span><span class="sc">;</span>
|
|
|
367 354
|
|
|
368 355 <span class="i">$TextFilesInfo</span>{<span class="w">ColCount</span>}[<span class="i">$Index</span>] = <span class="i">@ColLabels</span><span class="sc">;</span>
|
|
|
369 356 <span class="k">push</span> <span class="i">@</span>{<span class="i">$TextFilesInfo</span>{<span class="w">ColLabels</span>}[<span class="i">$Index</span>]}<span class="cm">,</span> <span class="i">@ColLabels</span><span class="sc">;</span>
|
|
|
370 357 <span class="k">for</span> <span class="i">$ColNum</span> <span class="s">(</span><span class="n">0</span> .. <span class="i">$#ColLabels</span><span class="s">)</span> <span class="s">{</span>
|
|
|
371 358 <span class="i">$ColLabel</span> = <span class="i">$ColLabels</span>[<span class="i">$ColNum</span>]<span class="sc">;</span>
|
|
|
372 359 <span class="i">$TextFilesInfo</span>{<span class="w">ColLabelToNumMap</span>}[<span class="i">$Index</span>]{<span class="i">$ColLabel</span>} = <span class="i">$ColNum</span><span class="sc">;</span>
|
|
|
373 360 <span class="s">}</span>
|
|
|
374 361 <span class="i">$TextFilesInfo</span>{<span class="w">FileSize</span>}[<span class="i">$Index</span>] = <span class="i">FileSize</span><span class="s">(</span><span class="i">$TextFile</span><span class="s">)</span><span class="sc">;</span>
|
|
|
375 362 <span class="s">(</span><span class="i">$ModifiedTimeString</span><span class="cm">,</span> <span class="i">$ModifiedDateString</span><span class="s">)</span> = <span class="i">FormattedFileModificationTimeAndDate</span><span class="s">(</span><span class="i">$TextFile</span><span class="s">)</span><span class="sc">;</span>
|
|
|
376 363 <span class="i">$TextFilesInfo</span>{<span class="w">FileLastModified</span>}[<span class="i">$Index</span>] = <span class="q">"$ModifiedTimeString; $ModifiedDateString"</span><span class="sc">;</span>
|
|
|
377 364 <span class="s">}</span>
|
|
|
378 365
|
|
|
379 366 <span class="s">}</span>
|
|
|
380 367
|
|
|
381 368 <span class="c"># Make sure specified numerical data columns are okay...</span>
|
|
|
382 <a name="ProcessColumnsInfo-"></a> 369 <span class="k">sub </span><span class="m">ProcessColumnsInfo</span> <span class="s">{</span>
|
|
|
383 370 <span class="k">my</span><span class="s">(</span><span class="i">$Index</span><span class="cm">,</span> <span class="i">$TextFile</span><span class="s">)</span><span class="sc">;</span>
|
|
|
384 371
|
|
|
385 372 <span class="i">@</span>{<span class="i">$TextFilesInfo</span>{<span class="w">NumericalDataColNums</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
|
|
|
386 373 <span class="i">@</span>{<span class="i">$TextFilesInfo</span>{<span class="w">NumericalDataColLabels</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
|
|
|
387 374
|
|
|
388 375 <span class="j">FILELIST:</span> <span class="k">for</span> <span class="i">$Index</span> <span class="s">(</span><span class="n">0</span> .. <span class="i">$#TextFilesList</span><span class="s">)</span> <span class="s">{</span>
|
|
|
389 376 <span class="i">$TextFile</span> = <span class="i">$TextFilesList</span>[<span class="i">$Index</span>]<span class="sc">;</span>
|
|
|
390 377 <span class="i">@</span>{<span class="i">$TextFilesInfo</span>{<span class="w">NumericalDataColNums</span>}[<span class="i">$Index</span>]} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
|
|
|
391 378 <span class="i">@</span>{<span class="i">$TextFilesInfo</span>{<span class="w">NumericalDataColLabels</span>}[<span class="i">$Index</span>]} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
|
|
|
392 379
|
|
|
393 380 <span class="k">if</span> <span class="s">(</span><span class="i">$TextFilesInfo</span>{<span class="w">FileOkay</span>}[<span class="i">$Index</span>]<span class="s">)</span> <span class="s">{</span>
|
|
|
394 381 <span class="k">my</span><span class="s">(</span><span class="i">$SpecifiedColNum</span><span class="cm">,</span> <span class="i">$ColNum</span><span class="cm">,</span> <span class="i">$ColLabel</span><span class="cm">,</span> <span class="i">@SpecifiedColNums</span><span class="cm">,</span> <span class="i">@SpecifiedColLabels</span><span class="s">)</span><span class="sc">;</span>
|
|
|
395 382 <span class="i">@SpecifiedColNums</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
|
|
|
396 383 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">Mode</span>} =~ <span class="q">/^colnum$/i</span><span class="s">)</span> <span class="s">{</span>
|
|
|
397 384 <span class="k">for</span> <span class="i">$SpecifiedColNum</span> <span class="s">(</span><span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedNumericalDataCols</span>}}<span class="s">)</span> <span class="s">{</span>
|
|
|
398 385 <span class="k">if</span> <span class="s">(</span><span class="i">$SpecifiedColNum</span> <= <span class="i">$TextFilesInfo</span>{<span class="w">ColCount</span>}[<span class="i">$Index</span>]<span class="s">)</span> <span class="s">{</span>
|
|
|
399 386 <span class="i">$ColNum</span> = <span class="i">$SpecifiedColNum</span> - <span class="n">1</span><span class="sc">;</span>
|
|
|
400 387 <span class="k">push</span> <span class="i">@SpecifiedColNums</span><span class="cm">,</span> <span class="i">$ColNum</span><span class="sc">;</span>
|
|
|
401 388 <span class="k">push</span> <span class="i">@SpecifiedColLabels</span><span class="cm">,</span> <span class="i">$TextFilesInfo</span>{<span class="w">ColLabels</span>}[<span class="i">$Index</span>][<span class="i">$ColNum</span>]<span class="sc">;</span>
|
|
|
402 389 <span class="s">}</span>
|
|
|
403 390 <span class="s">}</span>
|
|
|
404 391 <span class="s">}</span>
|
|
|
405 392 <span class="k">else</span> <span class="s">{</span>
|
|
|
406 393 <span class="k">for</span> <span class="i">$ColLabel</span> <span class="s">(</span><span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedNumericalDataCols</span>}}<span class="s">)</span> <span class="s">{</span>
|
|
|
407 394 <span class="k">if</span> <span class="s">(</span><span class="k">exists</span><span class="s">(</span><span class="i">$TextFilesInfo</span>{<span class="w">ColLabelToNumMap</span>}[<span class="i">$Index</span>]{<span class="i">$ColLabel</span>}<span class="s">)</span><span class="s">)</span> <span class="s">{</span>
|
|
|
408 395 <span class="i">$ColNum</span> = <span class="i">$TextFilesInfo</span>{<span class="w">ColLabelToNumMap</span>}[<span class="i">$Index</span>]{<span class="i">$ColLabel</span>}<span class="sc">;</span>
|
|
|
409 396 <span class="k">push</span> <span class="i">@SpecifiedColNums</span><span class="cm">,</span> <span class="i">$ColNum</span><span class="sc">;</span>
|
|
|
410 397 <span class="k">push</span> <span class="i">@SpecifiedColLabels</span><span class="cm">,</span> <span class="i">$ColLabel</span><span class="sc">;</span>
|
|
|
411 398 <span class="s">}</span>
|
|
|
412 399 <span class="s">}</span>
|
|
|
413 400 <span class="s">}</span>
|
|
|
414 401 <span class="k">if</span> <span class="s">(</span><span class="i">@SpecifiedColNums</span><span class="s">)</span> <span class="s">{</span>
|
|
|
415 402 <span class="k">push</span> <span class="i">@</span>{<span class="i">$TextFilesInfo</span>{<span class="w">NumericalDataColNums</span>}[<span class="i">$Index</span>]}<span class="cm">,</span> <span class="i">@SpecifiedColNums</span><span class="sc">;</span>
|
|
|
416 403 <span class="k">push</span> <span class="i">@</span>{<span class="i">$TextFilesInfo</span>{<span class="w">NumericalDataColLabels</span>}[<span class="i">$Index</span>]}<span class="cm">,</span> <span class="i">@SpecifiedColLabels</span><span class="sc">;</span>
|
|
|
417 404 <span class="s">}</span>
|
|
|
418 405 <span class="s">}</span>
|
|
|
419 406 <span class="s">}</span>
|
|
|
420 407 <span class="s">}</span>
|
|
|
421 408
|
|
|
422 409 <span class="c"># Process option values...</span>
|
|
|
423 <a name="ProcessOptions-"></a> 410 <span class="k">sub </span><span class="m">ProcessOptions</span> <span class="s">{</span>
|
|
|
424 411 <span class="i">%OptionsInfo</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
|
|
|
425 412
|
|
|
426 413 <span class="i">$OptionsInfo</span>{<span class="w">Mode</span>} = <span class="i">$Options</span>{<span class="w">mode</span>}<span class="sc">;</span>
|
|
|
427 414
|
|
|
428 415 <span class="i">$OptionsInfo</span>{<span class="w">All</span>} = <span class="i">$Options</span>{<span class="w">all</span>} ? <span class="i">$Options</span>{<span class="w">all</span>} <span class="co">:</span> <span class="n">0</span><span class="sc">;</span>
|
|
|
429 416 <span class="i">$OptionsInfo</span>{<span class="w">Count</span>} = <span class="i">$Options</span>{<span class="w">count</span>} ? <span class="i">$Options</span>{<span class="w">count</span>} <span class="co">:</span> <span class="n">0</span><span class="sc">;</span>
|
|
|
430 417
|
|
|
431 418 <span class="i">$OptionsInfo</span>{<span class="w">DetailLevel</span>} = <span class="i">$Options</span>{<span class="w">detail</span>} ? <span class="i">$Options</span>{<span class="w">detail</span>} <span class="co">:</span> <span class="n">1</span><span class="sc">;</span>
|
|
|
432 419
|
|
|
433 420 <span class="i">$OptionsInfo</span>{<span class="w">Empty</span>} = <span class="i">$Options</span>{<span class="w">empty</span>} ? <span class="i">$Options</span>{<span class="w">empty</span>} <span class="co">:</span> <span class="n">0</span><span class="sc">;</span>
|
|
|
434 421
|
|
|
435 422 <span class="i">$OptionsInfo</span>{<span class="w">InDelim</span>} = <span class="i">$Options</span>{<span class="w">indelim</span>}<span class="sc">;</span>
|
|
|
436 423 <span class="i">$OptionsInfo</span>{<span class="w">NumericalDataCols</span>} = <span class="i">$Options</span>{<span class="w">numericaldatacols</span>} ? <span class="i">$Options</span>{<span class="w">numericaldatacols</span>} <span class="co">:</span> <span class="n">0</span><span class="sc">;</span>
|
|
|
437 424
|
|
|
438 425 <span class="i">$OptionsInfo</span>{<span class="w">ParseLines</span>} = <span class="s">(</span><span class="i">$Options</span>{<span class="w">all</span>} || <span class="i">$Options</span>{<span class="w">empty</span>} || <span class="i">$Options</span>{<span class="w">numericaldatacols</span>}<span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span> <span class="n">0</span><span class="sc">;</span>
|
|
|
439 426 <span class="i">$OptionsInfo</span>{<span class="w">CountEmpty</span>} = <span class="s">(</span><span class="i">$Options</span>{<span class="w">all</span>} || <span class="i">$Options</span>{<span class="w">empty</span>}<span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span> <span class="n">0</span><span class="sc">;</span>
|
|
|
440 427 <span class="i">$OptionsInfo</span>{<span class="w">CheckData</span>} = <span class="s">(</span><span class="i">$Options</span>{<span class="w">all</span>} || <span class="i">$Options</span>{<span class="w">datacheck</span>}<span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span> <span class="n">0</span><span class="sc">;</span>
|
|
|
441 428 <span class="i">$OptionsInfo</span>{<span class="w">CheckNumericalData</span>} = <span class="s">(</span><span class="i">$Options</span>{<span class="w">all</span>} || <span class="i">$Options</span>{<span class="w">numericaldatacols</span>}<span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span> <span class="n">0</span><span class="sc">;</span>
|
|
|
442 429
|
|
|
443 430 <span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedNumericalDataCols</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
|
|
|
444 431 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">numericaldatacols</span>}<span class="s">)</span> <span class="s">{</span>
|
|
|
445 432 <span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedNumericalDataCols</span>}} = <span class="k">split</span> <span class="q">","</span><span class="cm">,</span> <span class="i">$Options</span>{<span class="w">numericaldatacols</span>}<span class="sc">;</span>
|
|
|
446 433 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">mode</span>} =~ <span class="q">/^colnum$/i</span><span class="s">)</span> <span class="s">{</span>
|
|
|
447 434 <span class="k">my</span><span class="s">(</span><span class="i">$ColNum</span><span class="s">)</span><span class="sc">;</span>
|
|
|
448 435 <span class="k">for</span> <span class="i">$ColNum</span> <span class="s">(</span><span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedNumericalDataCols</span>}}<span class="s">)</span> <span class="s">{</span>
|
|
|
449 436 <span class="k">if</span> <span class="s">(</span>!<span class="i">IsPositiveInteger</span><span class="s">(</span><span class="i">$ColNum</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
|
|
|
450 437 <span class="k">die</span> <span class="q">"Error: Invalid value $ColNum specified using \"--numericaldatacols\" option: Allowed values: > 0\n"</span><span class="sc">;</span>
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451 438 <span class="s">}</span>
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452 439 <span class="s">}</span>
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453 440 <span class="s">}</span>
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454 441 <span class="s">}</span>
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455 442
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456 443 <span class="s">}</span>
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457 444
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458 445 <span class="c"># Setup script usage and retrieve command line arguments specified using various options...</span>
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459 <a name="SetupScriptUsage-"></a> 446 <span class="k">sub </span><span class="m">SetupScriptUsage</span> <span class="s">{</span>
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460 447
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461 448 <span class="c"># Retrieve all the options...</span>
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462 449 <span class="i">%Options</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span>
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463 450 <span class="i">$Options</span>{<span class="w">detail</span>} = <span class="n">1</span><span class="sc">;</span>
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464 451 <span class="i">$Options</span>{<span class="w">mode</span>} = <span class="q">"colnum"</span><span class="sc">;</span>
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465 452 <span class="i">$Options</span>{<span class="w">indelim</span>} = <span class="q">"comma"</span><span class="sc">;</span>
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466 453 <span class="k">if</span> <span class="s">(</span>!<span class="i">GetOptions</span><span class="s">(</span>\<span class="i">%Options</span><span class="cm">,</span> <span class="q">"all|a"</span><span class="cm">,</span> <span class="q">"count|c"</span><span class="cm">,</span> <span class="q">"datacheck"</span><span class="cm">,</span> <span class="q">"detail|d=i"</span><span class="cm">,</span> <span class="q">"empty|e"</span><span class="cm">,</span> <span class="q">"help|h"</span><span class="cm">,</span> <span class="q">"indelim=s"</span><span class="cm">,</span> <span class="q">"mode|m=s"</span><span class="cm">,</span> <span class="q">"numericaldatacols|n=s"</span><span class="cm">,</span> <span class="q">"workingdir|w=s"</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span>
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467 454 <span class="k">die</span> <span class="q">"\nTo get a list of valid options and their values, use \"$ScriptName -h\" or\n\"perl -S $ScriptName -h\" command and try again...\n"</span><span class="sc">;</span>
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468 455 <span class="s">}</span>
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469 456 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">workingdir</span>}<span class="s">)</span> <span class="s">{</span>
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470 457 <span class="k">if</span> <span class="s">(</span>! <span class="k">-d</span> <span class="i">$Options</span>{<span class="w">workingdir</span>}<span class="s">)</span> <span class="s">{</span>
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471 458 <span class="k">die</span> <span class="q">"Error: The value specified, $Options{workingdir}, for option \"-w --workingdir\" is not a directory name.\n"</span><span class="sc">;</span>
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472 459 <span class="s">}</span>
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473 460 <span class="k">chdir</span> <span class="i">$Options</span>{<span class="w">workingdir</span>} <span class="k">or</span> <span class="k">die</span> <span class="q">"Error: Couldn't chdir $Options{workingdir}: $! \n"</span><span class="sc">;</span>
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474 461 <span class="s">}</span>
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475 462 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">mode</span>} !~ <span class="q">/^(colnum|collabel)$/i</span><span class="s">)</span> <span class="s">{</span>
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476 463 <span class="k">die</span> <span class="q">"Error: The value specified, $Options{mode}, for option \"-m --mode\" is not valid. Allowed values: colnum or collabel\n"</span><span class="sc">;</span>
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477 464 <span class="s">}</span>
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478 465 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">indelim</span>} !~ <span class="q">/^(comma|semicolon)$/i</span><span class="s">)</span> <span class="s">{</span>
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479 466 <span class="k">die</span> <span class="q">"Error: The value specified, $Options{indelim}, for option \"--indelim\" is not valid. Allowed values: comma or semicolon\n"</span><span class="sc">;</span>
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480 467 <span class="s">}</span>
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481 468 <span class="k">if</span> <span class="s">(</span>!<span class="i">IsPositiveInteger</span><span class="s">(</span><span class="i">$Options</span>{<span class="w">detail</span>}<span class="s">)</span><span class="s">)</span> <span class="s">{</span>
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482 469 <span class="k">die</span> <span class="q">"Error: The value specified, $Options{detail}, for option \"-d --detail\" is not valid. Allowed values: > 0\n"</span><span class="sc">;</span>
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483 470 <span class="s">}</span>
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484 471 <span class="s">}</span>
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485 472
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486 <a name="EOF-"></a></pre>
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487 <p> </p>
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488 <br />
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489 <center>
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490 <img src="../../../images/h2o2.png">
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491 </center>
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492 </body>
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493 </html>
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