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1 NAME
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2 TextFilesToSDFiles.pl - Generate SD files from CSV or TSV TextFile(s)
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3
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4 SYNOPSIS
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5 TextFilesToSDFiles.pl TextFile(s)...
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6
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7 TextFilesToSDFiles.pl [-h, --help] [--indelim comma | semicolon] [-l,
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8 --label yes | no] [-o, --overwrite] [-r, --root rootname] [-w,
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9 --workingdir dirname] TextFile(s)...
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10
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11 DESCRIPTION
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12 Generate SD files from CSV or TSV *TextFile(s)*. The new SD files
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13 contain no structure data as indicated by empty structure data block;
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14 Data fields and values in SD files are generated using *TextFile(s)*
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15 column labels and corresponding data values.
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16
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17 Multiple *TextFile(s)* names are separated by space. The valid file
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18 extensions are *.csv* and *.tsv* for comma/semicolon and tab delimited
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19 text files respectively. All other file names are ignored. All the text
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20 files in a current directory can be specified by **.csv*, **.tsv*, or
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21 the current directory name. The --indelim option determines the format
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22 of *TextFile(s)*. Any file which doesn't correspond to the format
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23 indicated by --indelim option is ignored.
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24
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25 OPTIONS
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26 -h, --help
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27 Print this help message.
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28
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29 --indelim *comma | semicolon*
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30 Input delimiter for CSV *TextFile(s)*. Possible values: *comma or
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31 semicolon*. Default value: *comma*. For TSV files, this option is
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32 ignored and *tab* is used as a delimiter.
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33
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34 -l, --label *yes | no*
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35 First line contains column labels. Possible values: *yes or no*.
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36 Default value: *yes*. Column labels are used to create SD data field
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37 labels; otherwise, data field labels look like
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38 Column<colnumber>Data.
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39
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40 -o, --overwrite
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41 Overwrite existing files.
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42
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43 -r, --root *rootname*
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44 New SD file names are generated using the root: <Root>.sdf. Default
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45 new file names: <TextFileName>WithNoStrData.sdf. This option is
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46 ignored for multiple input files.
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47
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48 -w, --workingdir *dirname*
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49 Location of working directory. Default: current directory.
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50
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51 EXAMPLES
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52 To generate NewSample1.sdf file from Sample1.csv file, type:
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53
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54 % TextFilesToSDFiles.pl -o -r NewSample1 Sample1.csv
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55
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56 To generate NewSample1.sdf file from Sample1.tsv file which doesn't
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57 contain column labels line, type:
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58
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59 % TextFilesToSDFiles.pl --label no -o -r NewSample1 Sample1.tsv
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60
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61 AUTHOR
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62 Manish Sud <msud@san.rr.com>
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63
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64 SEE ALSO
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65 JoinTextFiles.pl, MergeTextFiles.pl, ModifySDFilesDataFields.pl,
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66 ModifyTextFilesFormat.pl
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67
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68 COPYRIGHT
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69 Copyright (C) 2015 Manish Sud. All rights reserved.
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70
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71 This file is part of MayaChemTools.
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72
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73 MayaChemTools is free software; you can redistribute it and/or modify it
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74 under the terms of the GNU Lesser General Public License as published by
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75 the Free Software Foundation; either version 3 of the License, or (at
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76 your option) any later version.
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77
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