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3 <title>MayaChemTools:Documentation:ModifyTextFilesFormat.pl</title>
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13 <div class="DocNav">
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14 <table width="100%" border=0 cellpadding=0 cellspacing=2>
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15 <tr align="left" valign="top"><td width="33%" align="left"><a href="./ModifySDFilesDataFields.html" title="ModifySDFilesDataFields.html">Previous</a> <a href="./index.html" title="Table of Contents">TOC</a> <a href="./MolFilesToSD.html" title="MolFilesToSD.html">Next</a></td><td width="34%" align="middle"><strong>ModifyTextFilesFormat.pl</strong></td><td width="33%" align="right"><a href="././code/ModifyTextFilesFormat.html" title="View source code">Code</a> | <a href="./../pdf/ModifyTextFilesFormat.pdf" title="PDF US Letter Size">PDF</a> | <a href="./../pdfgreen/ModifyTextFilesFormat.pdf" title="PDF US Letter Size with narrow margins: www.changethemargins.com">PDFGreen</a> | <a href="./../pdfa4/ModifyTextFilesFormat.pdf" title="PDF A4 Size">PDFA4</a> | <a href="./../pdfa4green/ModifyTextFilesFormat.pdf" title="PDF A4 Size with narrow margins: www.changethemargins.com">PDFA4Green</a></td></tr>
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16 </table>
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17 </div>
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18 <p>
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19 </p>
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20 <h2>NAME</h2>
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21 <p>ModifyTextFilesFormat.pl - Change CSV Textfile(s) into TSV Textfile(s) and vice versa</p>
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22 <p>
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23 </p>
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24 <h2>SYNOPSIS</h2>
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25 <p>ModifyTextFilesFormat.pl TextFile(s)...</p>
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26 <p>ModifyTextFilesFormat.pl [<strong>-h, --help</strong>] [<strong>--indelim</strong> comma | semicolon]
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27 [<strong>--outdelim</strong> comma | tab | semicolon] [<strong>-q, --quote</strong> yes | no] [<strong>-r, --root</strong> rootname]
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28 [<strong>-w, --workingdir</strong> dirname] TextFile(s)...</p>
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29 <p>
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30 </p>
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31 <h2>DESCRIPTION</h2>
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32 <p>Interchange CSV and TSV <em>TextFile(s)</em> format. Mutiple file names are separated by spaces.
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33 The valid file extensions are <em>.csv</em> and <em>.tsv</em> for comma/semicolon and tab delimited
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34 text files respectively. All other file names are ignored. All the text files in a current
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35 directory can be specified by <em>*.csv</em>, <em>*.tsv</em>, or the current directory name. The
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36 <strong>--indelim</strong> option determines the format of <em>TextFile(s)</em>. Any file which doesn't
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37 correspond to the format indicated by <strong>--indelim</strong> option is ignored.</p>
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38 <p>
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39 </p>
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40 <h2>OPTIONS</h2>
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41 <dl>
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42 <dt><strong><strong>-h, --help</strong></strong></dt>
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43 <dd>
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44 <p>Print this help message.</p>
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45 </dd>
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46 <dt><strong><strong>--indelim</strong> <em>comma | semicolon</em></strong></dt>
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47 <dd>
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48 <p>Input delimiter for CSV <em>TextFile(s)</em>. Possible values: <em>comma or semicolon</em>.
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49 Default value: <em>comma</em>. For TSV files, this option is ignored and <em>tab</em> is used as a
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50 delimiter.</p>
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51 </dd>
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52 <dt><strong><strong>-o, --overwrite</strong></strong></dt>
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53 <dd>
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54 <p>Overwrite existing files.</p>
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55 </dd>
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56 <dt><strong><strong>--outdelim</strong> <em>comma | tab | semicolon</em></strong></dt>
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57 <dd>
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58 <p>Output text file delimiter. Possible values: <em>comma, tab, or semicolon</em>
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59 Default value: <em>comma</em>.</p>
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60 </dd>
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61 <dt><strong><strong>-q, --quote</strong> <em>yes | no</em></strong></dt>
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62 <dd>
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63 <p>Put quotes around column values in output text file. Possible values: <em>yes or
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64 no</em>. Default value: <em>yes</em>.</p>
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65 </dd>
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66 <dt><strong><strong>-r, --root</strong> <em>rootname</em></strong></dt>
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67 <dd>
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68 <p>New text file name is generated using the root: <Root>.<Ext>. Default new file
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69 name: <InitialTextFileName>FormatModified.<Ext>. The csv, and tsv
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70 <Ext> values are used for comma/semicolon, and tab delimited text files
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71 respectively. This option is ignored for multiple input files.</p>
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72 </dd>
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73 <dt><strong><strong>-w, --workingdir</strong> <em>dirname</em></strong></dt>
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74 <dd>
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75 <p>Location of working directory. Default: current directory.</p>
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76 </dd>
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77 </dl>
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78 <p>
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79 </p>
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80 <h2>EXAMPLES</h2>
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81 <p>To convert Sample*.csv into TSV files, type:</p>
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82 <div class="ExampleBox">
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83 % ModifyTextFilesFormat.pl --outdelim tab -q no -o Sample*.csv</div>
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84 <p>To convert Sample1.tsv into NewSample1.csv without any quotes around column
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85 data values, type:</p>
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86 <div class="ExampleBox">
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87 % ModifyTextFilesFormat.pl --outdelim comma - q no
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88 -r NewSample1 -o Sample1.tsv</div>
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89 <p>
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90 </p>
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91 <h2>AUTHOR</h2>
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92 <p><a href="mailto:msud@san.rr.com">Manish Sud</a></p>
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93 <p>
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94 </p>
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95 <h2>SEE ALSO</h2>
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96 <p><a href="./ModifyNewLineChar.html">ModifyNewLineChar.pl</a>
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97 </p>
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98 <p>
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99 </p>
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100 <h2>COPYRIGHT</h2>
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101 <p>Copyright (C) 2015 Manish Sud. All rights reserved.</p>
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102 <p>This file is part of MayaChemTools.</p>
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103 <p>MayaChemTools is free software; you can redistribute it and/or modify it under
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104 the terms of the GNU Lesser General Public License as published by the Free
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105 Software Foundation; either version 3 of the License, or (at your option)
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106 any later version.</p>
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107 <p> </p><p> </p><div class="DocNav">
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108 <table width="100%" border=0 cellpadding=0 cellspacing=2>
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109 <tr align="left" valign="top"><td width="33%" align="left"><a href="./ModifySDFilesDataFields.html" title="ModifySDFilesDataFields.html">Previous</a> <a href="./index.html" title="Table of Contents">TOC</a> <a href="./MolFilesToSD.html" title="MolFilesToSD.html">Next</a></td><td width="34%" align="middle"><strong>March 29, 2015</strong></td><td width="33%" align="right"><strong>ModifyTextFilesFormat.pl</strong></td></tr>
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110 </table>
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111 </div>
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