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.\"
.IX Title "TEXTFILESTOSDFILES 1"
.TH TEXTFILESTOSDFILES 1 "2015-03-29" "perl v5.14.2" "MayaChemTools"
.\" For nroff, turn off justification.  Always turn off hyphenation; it makes
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.SH "NAME"
TextFilesToSDFiles.pl \- Generate SD files from CSV or TSV TextFile(s)
.SH "SYNOPSIS"
.IX Header "SYNOPSIS"
TextFilesToSDFiles.pl TextFile(s)...
.PP
TextFilesToSDFiles.pl [\fB\-h, \-\-help\fR] [\fB\-\-indelim\fR comma | semicolon] [\fB\-l, \-\-label\fR yes | no]
[\fB\-o, \-\-overwrite\fR] [\fB\-r, \-\-root\fR rootname] [\fB\-w, \-\-workingdir\fR dirname] TextFile(s)...
.SH "DESCRIPTION"
.IX Header "DESCRIPTION"
Generate \s-1SD\s0 files from \s-1CSV\s0 or \s-1TSV\s0 \fITextFile(s)\fR. The new \s-1SD\s0 files contain no structure data
as indicated by empty structure data block; Data fields and values in \s-1SD\s0 files are generated
using \fITextFile(s)\fR column labels and corresponding data values.
.PP
Multiple \fITextFile(s)\fR names are separated by space. The valid file extensions are
\&\fI.csv\fR and \fI.tsv\fR for comma/semicolon and tab delimited text files respectively.
All other file names are ignored. All the text files in a current directory can be specified
by \fI*.csv\fR, \fI*.tsv\fR, or the current directory name. The \fB\-\-indelim\fR option
determines the format of \fITextFile(s)\fR. Any file which doesn't correspond to
the format indicated by \fB\-\-indelim\fR option is ignored.
.SH "OPTIONS"
.IX Header "OPTIONS"
.IP "\fB\-h, \-\-help\fR" 4
.IX Item "-h, --help"
Print this help message.
.IP "\fB\-\-indelim\fR \fIcomma | semicolon\fR" 4
.IX Item "--indelim comma | semicolon"
Input delimiter for \s-1CSV\s0 \fITextFile(s)\fR. Possible values: \fIcomma or semicolon\fR.
Default value: \fIcomma\fR. For \s-1TSV\s0 files, this option is ignored and \fItab\fR is used as a
delimiter.
.IP "\fB\-l, \-\-label\fR \fIyes | no\fR" 4
.IX Item "-l, --label yes | no"
First line contains column labels. Possible values: \fIyes or no\fR. Default value: \fIyes\fR.
Column labels are used to create \s-1SD\s0 data field labels; otherwise, data field labels look
like Column<colnumber>Data.
.IP "\fB\-o, \-\-overwrite\fR" 4
.IX Item "-o, --overwrite"
Overwrite existing files.
.IP "\fB\-r, \-\-root\fR \fIrootname\fR" 4
.IX Item "-r, --root rootname"
New \s-1SD\s0 file names are generated using the root: <Root>.sdf. Default new file names:
<TextFileName>WithNoStrData.sdf. This option is ignored for multiple input files.
.IP "\fB\-w, \-\-workingdir\fR \fIdirname\fR" 4
.IX Item "-w, --workingdir dirname"
Location of working directory. Default: current directory.
.SH "EXAMPLES"
.IX Header "EXAMPLES"
To generate NewSample1.sdf file from Sample1.csv file, type:
.PP
.Vb 1
\&    % TextFilesToSDFiles.pl \-o \-r NewSample1 Sample1.csv
.Ve
.PP
To generate NewSample1.sdf file from Sample1.tsv file which doesn't
contain column labels line, type:
.PP
.Vb 1
\&    % TextFilesToSDFiles.pl \-\-label no \-o \-r NewSample1 Sample1.tsv
.Ve
.SH "AUTHOR"
.IX Header "AUTHOR"
Manish Sud <[e-mail]>
.SH "SEE ALSO"
.IX Header "SEE ALSO"
JoinTextFiles.pl, MergeTextFiles.pl, ModifySDFilesDataFields.pl, ModifyTextFilesFormat.pl
.SH "COPYRIGHT"
.IX Header "COPYRIGHT"
Copyright (C) 2015 Manish Sud. All rights reserved.
.PP
This file is part of MayaChemTools.
.PP
MayaChemTools is free software; you can redistribute it and/or modify it under
the terms of the \s-1GNU\s0 Lesser General Public License as published by the Free
Software Foundation; either version 3 of the License, or (at your option)
any later version.