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<html> <head> <title>MayaChemTools:Code:InfoPeriodicTableElements.pl</title> <meta http-equiv="content-type" content="text/html;charset=utf-8"> <link rel="stylesheet" type="text/css" href="../../../css/MayaChemToolsCode.css"> </head> <body leftmargin="20" rightmargin="20" topmargin="10" bottommargin="10"> <br/> <center> <a href="http://www.mayachemtools.org" title="MayaChemTools Home"><img src="../../../images/MayaChemToolsLogo.gif" border="0" alt="MayaChemTools"></a> </center> <br/> <pre> 1 #!/usr/bin/perl -w 2 <span class="c">#</span> 3 <span class="c"># $RCSfile: InfoPeriodicTableElements.pl,v $</span> 4 <span class="c"># $Date: 2015/02/28 20:46:20 $</span> 5 <span class="c"># $Revision: 1.28 $</span> 6 <span class="c">#</span> 7 <span class="c"># Author: Manish Sud <msud@san.rr.com></span> 8 <span class="c">#</span> 9 <span class="c"># Copyright (C) 2015 Manish Sud. All rights reserved.</span> 10 <span class="c">#</span> 11 <span class="c"># This file is part of MayaChemTools.</span> 12 <span class="c">#</span> 13 <span class="c"># MayaChemTools is free software; you can redistribute it and/or modify it under</span> 14 <span class="c"># the terms of the GNU Lesser General Public License as published by the Free</span> 15 <span class="c"># Software Foundation; either version 3 of the License, or (at your option) any</span> 16 <span class="c"># later version.</span> 17 <span class="c">#</span> 18 <span class="c"># MayaChemTools is distributed in the hope that it will be useful, but without</span> 19 <span class="c"># any warranty; without even the implied warranty of merchantability of fitness</span> 20 <span class="c"># for a particular purpose. See the GNU Lesser General Public License for more</span> 21 <span class="c"># details.</span> 22 <span class="c">#</span> 23 <span class="c"># You should have received a copy of the GNU Lesser General Public License</span> 24 <span class="c"># along with MayaChemTools; if not, see <http://www.gnu.org/licenses/> or</span> 25 <span class="c"># write to the Free Software Foundation Inc., 59 Temple Place, Suite 330,</span> 26 <span class="c"># Boston, MA, 02111-1307, USA.</span> 27 <span class="c">#</span> 28 29 <span class="k">use</span> <span class="w">strict</span><span class="sc">;</span> 30 <span class="k">use</span> <span class="w">FindBin</span><span class="sc">;</span> <span class="k">use</span> <span class="w">lib</span> <span class="q">"$FindBin::Bin/../lib"</span><span class="sc">;</span> 31 <span class="k">use</span> <span class="w">Getopt::Long</span><span class="sc">;</span> 32 <span class="k">use</span> <span class="w">File::Basename</span><span class="sc">;</span> 33 <span class="k">use</span> <span class="w">Text::ParseWords</span><span class="sc">;</span> 34 <span class="k">use</span> <span class="w">Benchmark</span><span class="sc">;</span> 35 <span class="k">use</span> <span class="w">FileUtil</span><span class="sc">;</span> 36 <span class="k">use</span> <span class="w">TextUtil</span><span class="sc">;</span> 37 <span class="k">use</span> <span class="w">PeriodicTable</span><span class="sc">;</span> 38 39 <span class="k">my</span><span class="s">(</span><span class="i">$ScriptName</span><span class="cm">,</span> <span class="i">%Options</span><span class="cm">,</span> <span class="i">$StartTime</span><span class="cm">,</span> <span class="i">$EndTime</span><span class="cm">,</span> <span class="i">$TotalTime</span><span class="s">)</span><span class="sc">;</span> 40 41 <span class="c"># Autoflush STDOUT</span> 42 <span class="i">$|</span> = <span class="n">1</span><span class="sc">;</span> 43 44 <span class="c"># Starting message...</span> 45 <span class="i">$ScriptName</span> = <span class="i">basename</span><span class="s">(</span><span class="i">$0</span><span class="s">)</span><span class="sc">;</span> 46 <span class="k">print</span> <span class="q">"\n$ScriptName: Starting...\n\n"</span><span class="sc">;</span> 47 <span class="i">$StartTime</span> = <span class="w">new</span> <span class="w">Benchmark</span><span class="sc">;</span> 48 49 <span class="c"># Get the options and setup script...</span> 50 <span class="i">SetupScriptUsage</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span> 51 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">help</span>}<span class="s">)</span> <span class="s">{</span> 52 <span class="k">die</span> <span class="i">GetUsageFromPod</span><span class="s">(</span><span class="q">"$FindBin::Bin/$ScriptName"</span><span class="s">)</span><span class="sc">;</span> 53 <span class="s">}</span> 54 55 <span class="k">print</span> <span class="q">"Processing options...\n"</span><span class="sc">;</span> 56 <span class="k">my</span><span class="s">(</span><span class="i">%OptionsInfo</span><span class="s">)</span><span class="sc">;</span> 57 <span class="i">ProcessOptions</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span> 58 59 <span class="i">ListElementProperties</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span> 60 <span class="k">print</span> <span class="q">"\n$ScriptName:Done...\n\n"</span><span class="sc">;</span> 61 62 <span class="i">$EndTime</span> = <span class="w">new</span> <span class="w">Benchmark</span><span class="sc">;</span> 63 <span class="i">$TotalTime</span> = <span class="w">timediff</span> <span class="s">(</span><span class="i">$EndTime</span><span class="cm">,</span> <span class="i">$StartTime</span><span class="s">)</span><span class="sc">;</span> 64 <span class="k">print</span> <span class="q">"Total time: "</span><span class="cm">,</span> <span class="i">timestr</span><span class="s">(</span><span class="i">$TotalTime</span><span class="s">)</span><span class="cm">,</span> <span class="q">"\n"</span><span class="sc">;</span> 65 66 <span class="c">###############################################################################</span> 67 68 <span class="c"># List atomic properties for elements...</span> <a name="ListElementProperties-"></a> 69 <span class="k">sub </span><span class="m">ListElementProperties</span> <span class="s">{</span> 70 <span class="k">my</span><span class="s">(</span><span class="i">$ElementID</span><span class="cm">,</span> <span class="i">$ElementDataRef</span><span class="cm">,</span> <span class="i">$PropertyName</span><span class="cm">,</span> <span class="i">$PropertyValue</span><span class="cm">,</span> <span class="i">$PropertyUnits</span><span class="cm">,</span> <span class="i">$PropertyUnitsRef</span><span class="cm">,</span> <span class="i">@PropertyLabels</span><span class="cm">,</span> <span class="i">@PropertyValues</span><span class="s">)</span><span class="sc">;</span> 71 72 <span class="k">print</span> <span class="q">"Listing information for periodic table element(s)...\n"</span><span class="sc">;</span> 73 74 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">FileOutput</span>}<span class="s">)</span> <span class="s">{</span> 75 <span class="k">print</span> <span class="q">"Generating file $OptionsInfo{OutFileName}...\n"</span><span class="sc">;</span> 76 <span class="k">open</span> <span class="w">OUTFILE</span><span class="cm">,</span> <span class="q">">$OptionsInfo{OutFileName}"</span> <span class="k">or</span> <span class="k">die</span> <span class="q">"Couldn't open $OptionsInfo{OutFileName}: $!\n"</span><span class="sc">;</span> 77 <span class="s">}</span> 78 79 <span class="c"># Setup property labels...</span> 80 <span class="i">@PropertyLabels</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span> 81 <span class="i">$PropertyUnitsRef</span> = <span class="i">PeriodicTable::GetElementPropertiesNamesAndUnits</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span> 82 <span class="k">for</span> <span class="i">$PropertyName</span> <span class="s">(</span><span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedProperies</span>}}<span class="s">)</span> <span class="s">{</span> 83 <span class="i">$PropertyUnits</span> = <span class="s">(</span><span class="k">exists</span> <span class="i">$PropertyUnitsRef</span>->{<span class="i">$PropertyName</span>}<span class="s">)</span> ? <span class="i">$PropertyUnitsRef</span>->{<span class="i">$PropertyName</span>} <span class="co">:</span> <span class="q">''</span><span class="sc">;</span> 84 <span class="k">if</span> <span class="s">(</span><span class="i">$PropertyName</span> =~ <span class="q">/^NaturalIsotopeData$/i</span><span class="s">)</span> <span class="s">{</span> 85 <span class="k">push</span> <span class="i">@PropertyLabels</span><span class="cm">,</span> <span class="q">qw(MassNumber: RelativeAtomicMass: NaturalAbundance:)</span><span class="sc">;</span> 86 <span class="s">}</span> 87 <span class="k">else</span> <span class="s">{</span> 88 <span class="k">push</span> <span class="i">@PropertyLabels</span><span class="cm">,</span> <span class="s">(</span><span class="i">$PropertyUnits</span> ? <span class="q">"$PropertyName ($PropertyUnits):"</span> <span class="co">:</span> <span class="q">"$PropertyName:"</span><span class="s">)</span><span class="sc">;</span> 89 <span class="s">}</span> 90 <span class="s">}</span> 91 92 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ElementRowsOutput</span>}<span class="s">)</span> <span class="s">{</span> 93 <span class="i">ListHeaderRowData</span><span class="s">(</span>\<span class="i">@PropertyLabels</span><span class="s">)</span><span class="sc">;</span> 94 <span class="s">}</span> 95 96 <span class="c"># Go over specified properties...</span> 97 <span class="k">for</span> <span class="i">$ElementID</span> <span class="s">(</span><span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedElementIDs</span>}}<span class="s">)</span> <span class="s">{</span> 98 <span class="i">$ElementDataRef</span> = <span class="i">PeriodicTable::GetElementPropertiesData</span><span class="s">(</span><span class="i">$ElementID</span><span class="s">)</span><span class="sc">;</span> 99 100 <span class="k">if</span> <span class="s">(</span>!<span class="i">$OptionsInfo</span>{<span class="w">ElementRowsOutput</span>}<span class="s">)</span> <span class="s">{</span> 101 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">FileOutput</span>}<span class="s">)</span> <span class="s">{</span> 102 <span class="k">print</span> <span class="i">OUTFILE</span> <span class="q">"\nListing atomic properties for element $ElementID...\n\n"</span><span class="sc">;</span> 103 <span class="s">}</span> 104 <span class="k">else</span> <span class="s">{</span> 105 <span class="k">print</span> <span class="q">"\nListing atomic properties for element $ElementID...\n\n"</span><span class="sc">;</span> 106 <span class="s">}</span> 107 <span class="s">}</span> 108 109 <span class="c"># Collect data..</span> 110 <span class="i">@PropertyValues</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span> 111 <span class="k">for</span> <span class="i">$PropertyName</span> <span class="s">(</span><span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedProperies</span>}}<span class="s">)</span> <span class="s">{</span> 112 <span class="k">if</span> <span class="s">(</span><span class="i">$PropertyName</span> =~ <span class="q">/^NaturalIsotopeData$/i</span><span class="s">)</span> <span class="s">{</span> 113 <span class="k">push</span> <span class="i">@PropertyValues</span><span class="cm">,</span> <span class="i">SetupIsotopeData</span><span class="s">(</span><span class="i">$ElementID</span><span class="s">)</span><span class="sc">;</span> 114 <span class="s">}</span> 115 <span class="k">else</span> <span class="s">{</span> 116 <span class="i">$PropertyValue</span> = <span class="i">$ElementDataRef</span>->{<span class="i">$PropertyName</span>}<span class="sc">;</span> 117 <span class="k">if</span> <span class="s">(</span><span class="i">IsFloat</span><span class="s">(</span><span class="i">$PropertyValue</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span> 118 <span class="i">$PropertyValue</span> = <span class="k">sprintf</span><span class="s">(</span><span class="q">"%.$OptionsInfo{Precision}f"</span><span class="cm">,</span> <span class="i">$PropertyValue</span><span class="s">)</span> + <span class="n">0</span><span class="sc">;</span> 119 <span class="s">}</span> 120 <span class="k">push</span> <span class="i">@PropertyValues</span><span class="cm">,</span> <span class="i">$PropertyValue</span><span class="sc">;</span> 121 <span class="s">}</span> 122 <span class="s">}</span> 123 <span class="c"># List data...</span> 124 <span class="i">ListElementData</span><span class="s">(</span>\<span class="i">@PropertyLabels</span><span class="cm">,</span> \<span class="i">@PropertyValues</span><span class="s">)</span><span class="sc">;</span> 125 <span class="s">}</span> 126 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">FileOutput</span>}<span class="s">)</span> <span class="s">{</span> 127 <span class="k">close</span> <span class="w">OUTFILE</span><span class="sc">;</span> 128 <span class="s">}</span> 129 <span class="k">print</span> <span class="q">"\n"</span><span class="sc">;</span> 130 <span class="s">}</span> 131 132 <span class="c"># List data for an element...</span> <a name="ListElementData-"></a> 133 <span class="k">sub </span><span class="m">ListElementData</span> <span class="s">{</span> 134 <span class="k">my</span><span class="s">(</span><span class="i">$DataLabelRef</span><span class="cm">,</span> <span class="i">$DataValueRef</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span> 135 <span class="k">my</span><span class="s">(</span><span class="i">$Index</span><span class="cm">,</span> <span class="i">$Line</span><span class="cm">,</span> <span class="i">$Value</span><span class="s">)</span><span class="sc">;</span> 136 137 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">ElementRowsOutput</span>}<span class="s">)</span> <span class="s">{</span> 138 <span class="i">$Line</span> = <span class="q">''</span><span class="sc">;</span> 139 <span class="c"># Format data...</span> 140 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">OutQuote</span>} || <span class="i">$Options</span>{<span class="w">outdelim</span>} !~ <span class="q">/^comma$/i</span><span class="s">)</span> <span class="s">{</span> 141 <span class="i">$Line</span> = <span class="i">JoinWords</span><span class="s">(</span><span class="i">$DataValueRef</span><span class="cm">,</span> <span class="i">$OptionsInfo</span>{<span class="w">OutDelim</span>}<span class="cm">,</span> <span class="i">$OptionsInfo</span>{<span class="w">OutQuote</span>}<span class="s">)</span><span class="sc">;</span> 142 <span class="s">}</span> 143 <span class="k">else</span> <span class="s">{</span> 144 <span class="c"># Always quote values containing commas...</span> 145 <span class="i">$Line</span> = <span class="s">(</span><span class="i">$DataValueRef</span>->[<span class="n">0</span>] =~ <span class="q">/\,/</span><span class="s">)</span> ? <span class="q">qq("$DataValueRef->[0]")</span> <span class="co">:</span> <span class="i">$DataValueRef</span>->[<span class="n">0</span>]<span class="sc">;</span> 146 <span class="k">for</span> <span class="i">$Index</span> <span class="s">(</span><span class="n">1</span> .. <span class="i">$#</span>{<span class="i">$DataValueRef</span>} <span class="s">)</span> <span class="s">{</span> 147 <span class="i">$Value</span> = <span class="i">$DataValueRef</span>->[<span class="i">$Index</span>]<span class="sc">;</span> 148 <span class="k">if</span> <span class="s">(</span><span class="i">$Value</span> =~ <span class="q">/\,/</span><span class="s">)</span> <span class="s">{</span> 149 <span class="i">$Value</span> = <span class="q">qq("$Value")</span><span class="sc">;</span> 150 <span class="s">}</span> 151 <span class="i">$Line</span> .= <span class="i">$OptionsInfo</span>{<span class="w">OutDelim</span>} . <span class="i">$Value</span><span class="sc">;</span> 152 <span class="s">}</span> 153 <span class="s">}</span> 154 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">FileOutput</span>}<span class="s">)</span> <span class="s">{</span> 155 <span class="k">print</span> <span class="i">OUTFILE</span> <span class="q">"$Line\n"</span><span class="sc">;</span> 156 <span class="s">}</span> 157 <span class="k">else</span> <span class="s">{</span> 158 <span class="k">print</span> <span class="q">"$Line\n"</span><span class="sc">;</span> 159 <span class="s">}</span> 160 <span class="s">}</span> 161 <span class="k">else</span> <span class="s">{</span> 162 <span class="c"># Format and list data...</span> 163 <span class="i">$Line</span> = <span class="q">''</span><span class="sc">;</span> 164 <span class="k">for</span> <span class="i">$Index</span> <span class="s">(</span><span class="n">0</span> .. <span class="i">$#</span>{<span class="i">$DataLabelRef</span>} <span class="s">)</span> <span class="s">{</span> 165 <span class="i">$Line</span> = <span class="i">$DataLabelRef</span>->[<span class="i">$Index</span>] . <span class="q">' '</span> . <span class="i">$DataValueRef</span>->[<span class="i">$Index</span>]<span class="sc">;</span> 166 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">FileOutput</span>}<span class="s">)</span> <span class="s">{</span> 167 <span class="k">print</span> <span class="i">OUTFILE</span> <span class="q">"$Line\n"</span><span class="sc">;</span> 168 <span class="s">}</span> 169 <span class="k">else</span> <span class="s">{</span> 170 <span class="k">print</span> <span class="q">"$Line\n"</span><span class="sc">;</span> 171 <span class="s">}</span> 172 <span class="s">}</span> 173 <span class="s">}</span> 174 <span class="s">}</span> 175 176 <span class="c"># List data for an element...</span> <a name="ListHeaderRowData-"></a> 177 <span class="k">sub </span><span class="m">ListHeaderRowData</span> <span class="s">{</span> 178 <span class="k">my</span><span class="s">(</span><span class="i">$DataLabelRef</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span> 179 <span class="k">my</span><span class="s">(</span><span class="i">$Line</span><span class="s">)</span><span class="sc">;</span> 180 181 <span class="c"># Format data...</span> 182 <span class="i">$Line</span> = <span class="i">JoinWords</span><span class="s">(</span><span class="i">$DataLabelRef</span><span class="cm">,</span> <span class="i">$OptionsInfo</span>{<span class="w">OutDelim</span>}<span class="cm">,</span> <span class="i">$OptionsInfo</span>{<span class="w">OutQuote</span>}<span class="s">)</span><span class="sc">;</span> 183 <span class="i">$Line</span> =~ <span class="q">s/\://g</span><span class="sc">;</span> 184 <span class="c"># List data...</span> 185 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">FileOutput</span>}<span class="s">)</span> <span class="s">{</span> 186 <span class="k">print</span> <span class="i">OUTFILE</span> <span class="q">"$Line\n"</span><span class="sc">;</span> 187 <span class="s">}</span> 188 <span class="k">else</span> <span class="s">{</span> 189 <span class="k">print</span> <span class="q">"$Line\n"</span><span class="sc">;</span> 190 <span class="s">}</span> 191 <span class="s">}</span> 192 193 <span class="c"># Setup isotope data strings...</span> <a name="SetupIsotopeData-"></a> 194 <span class="k">sub </span><span class="m">SetupIsotopeData</span> <span class="s">{</span> 195 <span class="k">my</span><span class="s">(</span><span class="i">$ElementID</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span> 196 <span class="k">my</span><span class="s">(</span><span class="i">$MassNumber</span><span class="cm">,</span> <span class="i">$RelativeAtomicMass</span><span class="cm">,</span> <span class="i">$NaturalAbundance</span><span class="cm">,</span> <span class="i">$NaturalIsotopeDataRef</span><span class="cm">,</span> <span class="i">@MassNumbers</span><span class="cm">,</span> <span class="i">@RelativeAtomicMasses</span><span class="cm">,</span> <span class="i">@NaturalAbundances</span><span class="s">)</span><span class="sc">;</span> 197 198 <span class="c"># Get natural isotope data: MassNumber, RelativeAtomicMass and NaturalAbundance</span> 199 <span class="i">@MassNumbers</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span> <span class="i">@RelativeAtomicMasses</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span> <span class="i">@NaturalAbundances</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span> 200 <span class="i">$NaturalIsotopeDataRef</span> = <span class="i">PeriodicTable::GetElementNaturalIsotopesData</span><span class="s">(</span><span class="i">$ElementID</span><span class="s">)</span><span class="sc">;</span> 201 <span class="k">for</span> <span class="i">$MassNumber</span> <span class="s">(</span><span class="k">sort</span> <span class="s">{</span><span class="i">$a</span> <=> <span class="i">$b</span><span class="s">}</span> <span class="k">keys</span> <span class="i">%</span>{<span class="i">$NaturalIsotopeDataRef</span>}<span class="s">)</span> <span class="s">{</span> 202 <span class="i">$RelativeAtomicMass</span> = <span class="i">$NaturalIsotopeDataRef</span>->{<span class="i">$MassNumber</span>}{<span class="w">RelativeAtomicMass</span>}<span class="sc">;</span> 203 <span class="i">$NaturalAbundance</span> = <span class="i">$NaturalIsotopeDataRef</span>->{<span class="i">$MassNumber</span>}{<span class="w">NaturalAbundance</span>}<span class="sc">;</span> 204 <span class="k">push</span> <span class="i">@MassNumbers</span><span class="cm">,</span> <span class="i">$MassNumber</span><span class="sc">;</span> 205 <span class="i">$RelativeAtomicMass</span> = <span class="s">(</span><span class="i">$RelativeAtomicMass</span> > <span class="n">0</span><span class="s">)</span> ? <span class="s">(</span><span class="k">sprintf</span><span class="s">(</span><span class="q">"%.$OptionsInfo{Precision}f"</span><span class="cm">,</span> <span class="i">$RelativeAtomicMass</span><span class="s">)</span> + <span class="n">0</span><span class="s">)</span> <span class="co">:</span> <span class="q">''</span><span class="sc">;</span> 206 <span class="k">push</span> <span class="i">@RelativeAtomicMasses</span><span class="cm">,</span> <span class="i">$RelativeAtomicMass</span><span class="sc">;</span> 207 <span class="i">$NaturalAbundance</span> = <span class="s">(</span><span class="i">$NaturalAbundance</span> > <span class="n">0</span><span class="s">)</span> ? <span class="s">(</span><span class="k">sprintf</span><span class="s">(</span><span class="q">"%.$OptionsInfo{Precision}f"</span><span class="cm">,</span> <span class="i">$NaturalAbundance</span><span class="s">)</span> + <span class="n">0</span><span class="s">)</span> <span class="co">:</span> <span class="q">''</span><span class="sc">;</span> 208 <span class="k">push</span> <span class="i">@NaturalAbundances</span><span class="cm">,</span> <span class="i">$NaturalAbundance</span><span class="sc">;</span> 209 <span class="s">}</span> 210 <span class="i">$MassNumber</span> = <span class="i">JoinWords</span><span class="s">(</span>\<span class="i">@MassNumbers</span><span class="cm">,</span> <span class="q">","</span><span class="cm">,</span> <span class="n">0</span><span class="s">)</span><span class="sc">;</span> 211 <span class="i">$RelativeAtomicMass</span> = <span class="i">JoinWords</span><span class="s">(</span>\<span class="i">@RelativeAtomicMasses</span><span class="cm">,</span> <span class="q">","</span><span class="cm">,</span> <span class="n">0</span><span class="s">)</span><span class="sc">;</span> 212 <span class="i">$NaturalAbundance</span> = <span class="i">JoinWords</span><span class="s">(</span>\<span class="i">@NaturalAbundances</span><span class="cm">,</span> <span class="q">","</span><span class="cm">,</span> <span class="n">0</span><span class="s">)</span><span class="sc">;</span> 213 <span class="k">return</span> <span class="s">(</span><span class="i">$MassNumber</span><span class="cm">,</span> <span class="i">$RelativeAtomicMass</span><span class="cm">,</span> <span class="i">$NaturalAbundance</span><span class="s">)</span><span class="sc">;</span> 214 <span class="s">}</span> 215 216 <span class="c"># Get propery names from categories...</span> <a name="GetPropertyNamesFromCategories-"></a> 217 <span class="k">sub </span><span class="m">GetPropertyNamesFromCategories</span> <span class="s">{</span> 218 <span class="k">my</span><span class="s">(</span><span class="i">$CategoryName</span><span class="s">)</span> = <span class="i">@_</span><span class="sc">;</span> 219 <span class="k">my</span><span class="s">(</span><span class="i">@PropertyNames</span><span class="s">)</span><span class="sc">;</span> 220 221 <span class="i">@PropertyNames</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span> 222 <span class="k">if</span> <span class="s">(</span><span class="i">$CategoryName</span> =~ <span class="q">/^Basic$/i</span><span class="s">)</span> <span class="s">{</span> 223 <span class="i">@PropertyNames</span> = <span class="s">(</span><span class="q">'AtomicNumber'</span><span class="cm">,</span> <span class="q">'ElementSymbol'</span><span class="cm">,</span> <span class="q">'ElementName'</span><span class="cm">,</span> <span class="q">'AtomicWeight'</span><span class="cm">,</span> <span class="q">'GroundStateConfiguration'</span><span class="cm">,</span> <span class="q">'GroupNumber'</span><span class="cm">,</span> <span class="q">'PeriodNumber'</span><span class="cm">,</span> <span class="q">'FirstIonizationEnergy'</span><span class="s">)</span><span class="sc">;</span> 224 <span class="s">}</span> <span class="k">elsif</span> <span class="s">(</span><span class="i">$CategoryName</span> =~ <span class="q">/^BasicAndNaturalIsotope$/i</span><span class="s">)</span> <span class="s">{</span> 225 <span class="c"># Natural isotope data includes: 'MassNumber', 'RelativeAtomicMass', 'NaturalAbundance'</span> 226 <span class="i">@PropertyNames</span> = <span class="s">(</span><span class="q">'AtomicNumber'</span><span class="cm">,</span> <span class="q">'ElementSymbol'</span><span class="cm">,</span> <span class="q">'ElementName'</span><span class="cm">,</span> <span class="q">'AtomicWeight'</span><span class="cm">,</span> <span class="q">'GroundStateConfiguration'</span><span class="cm">,</span> <span class="q">'GroupNumber'</span><span class="cm">,</span> <span class="q">'PeriodNumber'</span><span class="cm">,</span> <span class="q">'FirstIonizationEnergy'</span><span class="cm">,</span> <span class="q">'NaturalIsotopeData'</span><span class="s">)</span><span class="sc">;</span> 227 <span class="s">}</span> <span class="k">elsif</span> <span class="s">(</span><span class="i">$CategoryName</span> =~ <span class="q">/^NaturalIsotope$/i</span><span class="s">)</span> <span class="s">{</span> 228 <span class="i">@PropertyNames</span> = <span class="s">(</span><span class="q">'AtomicNumber'</span><span class="cm">,</span> <span class="q">'ElementSymbol'</span><span class="cm">,</span> <span class="q">'ElementName'</span><span class="cm">,</span> <span class="q">'NaturalIsotopeData'</span><span class="s">)</span><span class="sc">;</span> 229 <span class="s">}</span> 230 231 <span class="k">return</span> <span class="i">@PropertyNames</span><span class="sc">;</span> 232 <span class="s">}</span> 233 234 <span class="c"># Process option values...</span> <a name="ProcessOptions-"></a> 235 <span class="k">sub </span><span class="m">ProcessOptions</span> <span class="s">{</span> 236 <span class="i">%OptionsInfo</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span> 237 238 <span class="i">$OptionsInfo</span>{<span class="w">Mode</span>} = <span class="i">$Options</span>{<span class="w">mode</span>}<span class="sc">;</span> 239 240 <span class="i">$OptionsInfo</span>{<span class="w">OutDelim</span>} = <span class="s">(</span><span class="i">$Options</span>{<span class="w">outdelim</span>} =~ <span class="q">/^tab$/i</span> <span class="s">)</span> ? <span class="q">"\t"</span> <span class="co">:</span> <span class="s">(</span><span class="s">(</span><span class="i">$Options</span>{<span class="w">outdelim</span>} =~ <span class="q">/^semicolon$/i</span><span class="s">)</span> ? <span class="q">"\;"</span> <span class="co">:</span> <span class="q">"\,"</span><span class="s">)</span><span class="sc">;</span> 241 <span class="i">$OptionsInfo</span>{<span class="w">OutQuote</span>} = <span class="s">(</span><span class="i">$Options</span>{<span class="w">quote</span>} =~ <span class="q">/^yes$/i</span><span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span> <span class="n">0</span><span class="sc">;</span> 242 243 <span class="i">$OptionsInfo</span>{<span class="w">Overwrite</span>} = <span class="k">defined</span> <span class="i">$Options</span>{<span class="w">overwrite</span>} ? <span class="i">$Options</span>{<span class="w">overwrite</span>} <span class="co">:</span> <span class="k">undef</span><span class="sc">;</span> 244 <span class="i">$OptionsInfo</span>{<span class="w">OutFileRoot</span>} = <span class="k">defined</span> <span class="i">$Options</span>{<span class="w">root</span>} ? <span class="i">$Options</span>{<span class="w">root</span>} <span class="co">:</span> <span class="k">undef</span><span class="sc">;</span> 245 246 <span class="i">$OptionsInfo</span>{<span class="w">Output</span>} = <span class="i">$Options</span>{<span class="w">output</span>}<span class="sc">;</span> 247 <span class="i">$OptionsInfo</span>{<span class="w">OutputStyle</span>} = <span class="i">$Options</span>{<span class="w">outputstyle</span>}<span class="sc">;</span> 248 249 <span class="i">$OptionsInfo</span>{<span class="w">ElementRowsOutput</span>} = <span class="s">(</span><span class="i">$Options</span>{<span class="w">outputstyle</span>} =~ <span class="q">/^ElementRows$/i</span><span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span> <span class="n">0</span><span class="sc">;</span> 250 <span class="i">$OptionsInfo</span>{<span class="w">FileOutput</span>} = <span class="s">(</span><span class="i">$Options</span>{<span class="w">output</span>} =~ <span class="q">/^File$/i</span><span class="s">)</span> ? <span class="n">1</span> <span class="co">:</span> <span class="n">0</span><span class="sc">;</span> 251 252 <span class="i">$OptionsInfo</span>{<span class="w">Precision</span>} = <span class="i">$Options</span>{<span class="w">precision</span>}<span class="sc">;</span> 253 254 <span class="k">my</span><span class="s">(</span><span class="i">$ElementID</span><span class="cm">,</span> <span class="i">@ElementIDs</span><span class="cm">,</span> <span class="i">@GroupElements</span><span class="cm">,</span> <span class="i">@PeriodElements</span><span class="cm">,</span> <span class="i">%GroupNamesMap</span><span class="s">)</span><span class="sc">;</span> 255 256 <span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedElementIDs</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span> 257 <span class="k">if</span> <span class="s">(</span><span class="i">@ARGV</span> >=<span class="n">1</span> && <span class="s">(</span><span class="i">$Options</span>{<span class="w">mode</span>} =~ <span class="q">/^All$/i</span><span class="s">)</span> <span class="s">)</span> <span class="s">{</span> 258 <span class="k">warn</span> <span class="q">"Warning: Ignoring comman line element IDs: Not valid for All value of \"-m --mode\" option...\n"</span><span class="sc">;</span> 259 <span class="s">}</span> 260 261 <span class="c"># Set up element IDs except for All mode...</span> 262 <span class="i">@ElementIDs</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span> 263 <span class="i">%GroupNamesMap</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span> 264 265 <span class="k">if</span> <span class="s">(</span><span class="i">@ARGV</span> >=<span class="n">1</span> <span class="s">)</span> <span class="s">{</span> 266 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">mode</span>} !~ <span class="q">/^All$/i</span><span class="s">)</span> <span class="s">{</span> 267 <span class="k">push</span> <span class="i">@ElementIDs</span><span class="cm">,</span> <span class="i">@ARGV</span><span class="sc">;</span> 268 <span class="s">}</span> 269 <span class="s">}</span> 270 <span class="k">else</span> <span class="s">{</span> 271 <span class="c"># Setup mode specified default values...</span> 272 <span class="k">my</span><span class="s">(</span><span class="i">$Nothing</span><span class="s">)</span><span class="sc">;</span> 273 <span class="j">MODE:</span> <span class="s">{</span> 274 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">mode</span>} =~ <span class="q">/^ElementID$/i</span><span class="s">)</span> <span class="s">{</span> <span class="k">push</span> <span class="i">@ElementIDs</span><span class="cm">,</span> <span class="q">'H'</span><span class="sc">;</span> <span class="k">last</span> <span class="j">MODE</span><span class="sc">;</span> <span class="s">}</span><span class="sc">;</span> 275 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">mode</span>} =~ <span class="q">/^AmericanGroupLabel$/i</span><span class="s">)</span> <span class="s">{</span> <span class="k">push</span> <span class="i">@ElementIDs</span><span class="cm">,</span> <span class="q">'IA'</span><span class="sc">;</span> <span class="k">last</span> <span class="j">MODE</span><span class="sc">;</span> <span class="s">}</span><span class="sc">;</span> 276 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">mode</span>} =~ <span class="q">/^EuropeanGroupLabel$/i</span><span class="s">)</span> <span class="s">{</span> <span class="k">push</span> <span class="i">@ElementIDs</span><span class="cm">,</span> <span class="q">'IA'</span><span class="sc">;</span> <span class="k">last</span> <span class="j">MODE</span><span class="sc">;</span> <span class="s">}</span><span class="sc">;</span> 277 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">mode</span>} =~ <span class="q">/^GroupNumber$/i</span><span class="s">)</span> <span class="s">{</span> <span class="k">push</span> <span class="i">@ElementIDs</span><span class="cm">,</span> <span class="q">'1'</span><span class="sc">;</span> <span class="k">last</span> <span class="j">MODE</span><span class="sc">;</span> <span class="s">}</span><span class="sc">;</span> 278 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">mode</span>} =~ <span class="q">/^GroupName$/i</span><span class="s">)</span> <span class="s">{</span> <span class="k">push</span> <span class="i">@ElementIDs</span><span class="cm">,</span> <span class="q">'AlkaliMetals'</span><span class="sc">;</span> <span class="k">last</span> <span class="j">MODE</span><span class="sc">;</span> <span class="s">}</span><span class="sc">;</span> 279 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">mode</span>} =~ <span class="q">/^PeriodNumber$/i</span><span class="s">)</span> <span class="s">{</span> <span class="k">push</span> <span class="i">@ElementIDs</span><span class="cm">,</span> <span class="q">'1'</span><span class="sc">;</span> <span class="k">last</span> <span class="j">MODE</span><span class="sc">;</span> <span class="s">}</span><span class="sc">;</span> 280 <span class="i">$Nothing</span> = <span class="n">1</span><span class="sc">;</span> 281 <span class="s">}</span> 282 <span class="s">}</span> 283 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">mode</span>} =~ <span class="q">/^GroupName$/i</span><span class="s">)</span> <span class="s">{</span> 284 <span class="c"># Map group names to what's stored in Perioidic table data file...</span> 285 <span class="i">%GroupNamesMap</span> = <span class="s">(</span><span class="q">'alkalimetals'</span><span class="cm">,</span> <span class="q">'Alkali metal'</span><span class="cm">,</span> <span class="q">'alkalineearthmetals'</span><span class="cm">,</span> <span class="q">'Alkaline earth metal'</span><span class="cm">,</span> <span class="q">'chalcogens'</span><span class="cm">,</span> <span class="q">'Chalcogen'</span><span class="cm">,</span> <span class="q">'coinagemetals'</span><span class="cm">,</span> <span class="q">'Coinage metal'</span><span class="cm">,</span> <span class="q">'halogens'</span><span class="cm">,</span> <span class="q">'Halogen'</span><span class="cm">,</span> <span class="q">'noblegases'</span><span class="cm">,</span> <span class="q">'Noble gas'</span><span class="cm">,</span> <span class="q">'pnictogens'</span><span class="cm">,</span> <span class="q">'Pnictogen'</span><span class="cm">,</span> <span class="q">'lanthanides'</span><span class="cm">,</span> <span class="q">'Lanthanoid'</span><span class="cm">,</span> <span class="q">'lanthanoids'</span><span class="cm">,</span> <span class="q">'Lanthanoid'</span><span class="cm">,</span> <span class="q">'actinides'</span><span class="cm">,</span> <span class="q">'Actinoid'</span><span class="cm">,</span> <span class="q">'actinoids'</span><span class="cm">,</span> <span class="q">'Actinoid'</span> <span class="s">)</span><span class="sc">;</span> 286 <span class="s">}</span> 287 288 <span class="c"># Generate list of elements...</span> 289 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">mode</span>} =~ <span class="q">/^All$/i</span><span class="s">)</span> <span class="s">{</span> 290 <span class="k">push</span> <span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedElementIDs</span>}}<span class="cm">,</span> <span class="i">PeriodicTable::GetElements</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span> 291 <span class="s">}</span> 292 <span class="k">else</span> <span class="s">{</span> 293 <span class="j">ELEMENTID:</span> <span class="k">for</span> <span class="i">$ElementID</span> <span class="s">(</span><span class="i">@ElementIDs</span><span class="s">)</span> <span class="s">{</span> 294 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">mode</span>} =~ <span class="q">/^ElementID$/i</span><span class="s">)</span> <span class="s">{</span> 295 <span class="k">if</span> <span class="s">(</span><span class="i">PeriodicTable::IsElement</span><span class="s">(</span><span class="i">$ElementID</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span> 296 <span class="k">push</span> <span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedElementIDs</span>}}<span class="cm">,</span> <span class="i">$ElementID</span><span class="sc">;</span> 297 <span class="s">}</span> 298 <span class="k">else</span> <span class="s">{</span> 299 <span class="k">warn</span> <span class="q">"Ignoring element ID, $ElementID, specified using command line parameter: Unknown element ID...\n"</span><span class="sc">;</span> 300 <span class="k">next</span> <span class="j">ELEMENTID</span><span class="sc">;</span> 301 <span class="s">}</span> 302 <span class="s">}</span> 303 <span class="k">elsif</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">mode</span>} =~ <span class="q">/^AmericanGroupLabel$/i</span><span class="s">)</span> <span class="s">{</span> 304 <span class="k">if</span> <span class="s">(</span><span class="i">@GroupElements</span> = <span class="i">PeriodicTable::GetElementsByAmericanStyleGroupLabel</span><span class="s">(</span><span class="i">$ElementID</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span> 305 <span class="k">push</span> <span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedElementIDs</span>}}<span class="cm">,</span> <span class="i">@GroupElements</span><span class="sc">;</span> 306 <span class="s">}</span> 307 <span class="k">else</span> <span class="s">{</span> 308 <span class="k">warn</span> <span class="q">"Ignoring American style group label, $ElementID, specified using command line parameter: Unknown group label...\n"</span><span class="sc">;</span> 309 <span class="k">next</span> <span class="j">ELEMENTID</span><span class="sc">;</span> 310 <span class="s">}</span> 311 <span class="s">}</span> 312 <span class="k">elsif</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">mode</span>} =~ <span class="q">/^EuropeanGroupLabel$/i</span><span class="s">)</span> <span class="s">{</span> 313 <span class="k">if</span> <span class="s">(</span><span class="i">@GroupElements</span> = <span class="i">PeriodicTable::GetElementsByEuropeanStyleGroupLabel</span><span class="s">(</span><span class="i">$ElementID</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span> 314 <span class="k">push</span> <span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedElementIDs</span>}}<span class="cm">,</span> <span class="i">@GroupElements</span><span class="sc">;</span> 315 <span class="s">}</span> 316 <span class="k">else</span> <span class="s">{</span> 317 <span class="k">warn</span> <span class="q">"Ignoring American style group label, $ElementID, specified using command line parameter: Unknown group label...\n"</span><span class="sc">;</span> 318 <span class="k">next</span> <span class="j">ELEMENTID</span><span class="sc">;</span> 319 <span class="s">}</span> 320 <span class="s">}</span> 321 <span class="k">elsif</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">mode</span>} =~ <span class="q">/^GroupNumber$/i</span><span class="s">)</span> <span class="s">{</span> 322 <span class="k">if</span> <span class="s">(</span><span class="i">@GroupElements</span> = <span class="i">PeriodicTable::GetElementsByGroupNumber</span><span class="s">(</span><span class="i">$ElementID</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span> 323 <span class="k">push</span> <span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedElementIDs</span>}}<span class="cm">,</span> <span class="i">@GroupElements</span><span class="sc">;</span> 324 <span class="s">}</span> 325 <span class="k">else</span> <span class="s">{</span> 326 <span class="k">warn</span> <span class="q">"Ignoring group number, $ElementID, specified using command line parameter: Unknown group number...\n"</span><span class="sc">;</span> 327 <span class="k">next</span> <span class="j">ELEMENTID</span><span class="sc">;</span> 328 <span class="s">}</span> 329 <span class="s">}</span> 330 <span class="k">elsif</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">mode</span>} =~ <span class="q">/^GroupName$/i</span><span class="s">)</span> <span class="s">{</span> 331 <span class="k">if</span> <span class="s">(</span><span class="k">exists</span> <span class="i">$GroupNamesMap</span>{<span class="k">lc</span><span class="s">(</span><span class="i">$ElementID</span><span class="s">)</span>}<span class="s">)</span> <span class="s">{</span> 332 <span class="i">@GroupElements</span> = <span class="i">PeriodicTable::GetElementsByGroupName</span><span class="s">(</span><span class="i">$GroupNamesMap</span>{<span class="k">lc</span><span class="s">(</span><span class="i">$ElementID</span><span class="s">)</span>}<span class="s">)</span><span class="sc">;</span> 333 <span class="k">push</span> <span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedElementIDs</span>}}<span class="cm">,</span> <span class="i">@GroupElements</span><span class="sc">;</span> 334 <span class="s">}</span> 335 <span class="k">else</span> <span class="s">{</span> 336 <span class="k">warn</span> <span class="q">"Ignoring group name, $ElementID, specified using command line parameter: Unknown group name...\n"</span><span class="sc">;</span> 337 <span class="k">next</span> <span class="j">ELEMENTID</span><span class="sc">;</span> 338 <span class="s">}</span> 339 <span class="s">}</span> 340 <span class="k">elsif</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">mode</span>} =~ <span class="q">/^PeriodNumber$/i</span><span class="s">)</span> <span class="s">{</span> 341 <span class="k">if</span> <span class="s">(</span><span class="i">@GroupElements</span> = <span class="i">PeriodicTable::GetElementsByPeriodNumber</span><span class="s">(</span><span class="i">$ElementID</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span> 342 <span class="k">push</span> <span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedElementIDs</span>}}<span class="cm">,</span> <span class="i">@GroupElements</span><span class="sc">;</span> 343 <span class="s">}</span> 344 <span class="k">else</span> <span class="s">{</span> 345 <span class="k">warn</span> <span class="q">"Ignoring period number, $ElementID, specified using command line parameter: Unknown period number...\n"</span><span class="sc">;</span> 346 <span class="k">next</span> <span class="j">ELEMENTID</span><span class="sc">;</span> 347 <span class="s">}</span> 348 <span class="s">}</span> 349 <span class="s">}</span> 350 <span class="s">}</span> 351 <span class="i">SetupSpecifiedProperties</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span> 352 353 <span class="c"># Setup output file name...</span> 354 <span class="i">$OptionsInfo</span>{<span class="w">OutFileName</span>} = <span class="q">''</span><span class="sc">;</span> 355 <span class="k">if</span> <span class="s">(</span><span class="i">$OptionsInfo</span>{<span class="w">FileOutput</span>}<span class="s">)</span> <span class="s">{</span> 356 <span class="k">my</span><span class="s">(</span><span class="i">$OutFileRoot</span><span class="cm">,</span> <span class="i">$OutFileExt</span><span class="s">)</span><span class="sc">;</span> 357 358 <span class="i">$OutFileRoot</span> = <span class="q">''</span><span class="sc">;</span> 359 <span class="i">$OutFileExt</span> = <span class="q">"csv"</span><span class="sc">;</span> 360 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">outdelim</span>} =~ <span class="q">/^tab$/i</span><span class="s">)</span> <span class="s">{</span> 361 <span class="i">$OutFileExt</span> = <span class="q">"tsv"</span><span class="sc">;</span> 362 <span class="s">}</span> 363 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">root</span>}<span class="s">)</span> <span class="s">{</span> 364 <span class="k">my</span> <span class="s">(</span><span class="i">$RootFileDir</span><span class="cm">,</span> <span class="i">$RootFileName</span><span class="cm">,</span> <span class="i">$RootFileExt</span><span class="s">)</span> = <span class="i">ParseFileName</span><span class="s">(</span><span class="i">$Options</span>{<span class="w">root</span>}<span class="s">)</span><span class="sc">;</span> 365 <span class="k">if</span> <span class="s">(</span><span class="i">$RootFileName</span> && <span class="i">$RootFileExt</span><span class="s">)</span> <span class="s">{</span> 366 <span class="i">$OutFileRoot</span> = <span class="i">$RootFileName</span><span class="sc">;</span> 367 <span class="s">}</span> 368 <span class="k">else</span> <span class="s">{</span> 369 <span class="i">$OutFileRoot</span> = <span class="i">$Options</span>{<span class="w">root</span>}<span class="sc">;</span> 370 <span class="s">}</span> 371 <span class="s">}</span> 372 <span class="k">else</span> <span class="s">{</span> 373 <span class="i">$OutFileRoot</span> = <span class="q">'PeriodicTableElementsInfo'</span> . <span class="i">$Options</span>{<span class="w">mode</span>}<span class="sc">;</span> 374 <span class="s">}</span> 375 <span class="i">$OptionsInfo</span>{<span class="w">OutFileName</span>} = <span class="i">$OutFileRoot</span> . <span class="q">'.'</span> . <span class="i">$OutFileExt</span><span class="sc">;</span> 376 <span class="k">if</span> <span class="s">(</span>!<span class="i">$Options</span>{<span class="w">overwrite</span>}<span class="s">)</span> <span class="s">{</span> 377 <span class="k">if</span> <span class="s">(</span><span class="k">-e</span> <span class="i">$OptionsInfo</span>{<span class="w">OutFileName</span>}<span class="s">)</span> <span class="s">{</span> 378 <span class="k">die</span> <span class="q">"Error: Output file, $OptionsInfo{OutFileName}, already exists.\nUse \-o --overwrite\ option or specify a different name using \"-r --root\" option.\n"</span><span class="sc">;</span> 379 <span class="s">}</span> 380 <span class="s">}</span> 381 <span class="s">}</span> 382 <span class="s">}</span> 383 384 <span class="c"># Setup properties to list...</span> <a name="SetupSpecifiedProperties-"></a> 385 <span class="k">sub </span><span class="m">SetupSpecifiedProperties</span> <span class="s">{</span> 386 <span class="i">$OptionsInfo</span>{<span class="w">Properties</span>} = <span class="k">defined</span> <span class="i">$Options</span>{<span class="w">properties</span>} ? <span class="i">$Options</span>{<span class="w">properties</span>} <span class="co">:</span> <span class="k">undef</span><span class="sc">;</span> 387 388 <span class="i">$OptionsInfo</span>{<span class="w">PropertiesMode</span>} = <span class="i">$Options</span>{<span class="w">propertiesmode</span>}<span class="sc">;</span> 389 <span class="i">$OptionsInfo</span>{<span class="w">PropertiesListing</span>} = <span class="i">$Options</span>{<span class="w">propertieslisting</span>}<span class="sc">;</span> 390 391 <span class="c"># Make sure atomic appropriate properties/category names are specified...</span> 392 <span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedProperies</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span> 393 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">properties</span>} && <span class="s">(</span><span class="i">$Options</span>{<span class="w">propertiesmode</span>} =~ <span class="q">/^All$/i</span><span class="s">)</span> <span class="s">)</span> <span class="s">{</span> 394 <span class="k">warn</span> <span class="q">"Warning: Ignoring values specifed by \"-p --properties\" option: Not valid for All value of \"--propertiesmode\" option...\n"</span><span class="sc">;</span> 395 <span class="s">}</span> 396 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">propertiesmode</span>} =~ <span class="q">/^All$/i</span><span class="s">)</span> <span class="s">{</span> 397 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">propertieslisting</span>} =~ <span class="q">/^Alphabetical$/i</span><span class="s">)</span> <span class="s">{</span> 398 <span class="k">push</span> <span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedProperies</span>}}<span class="cm">,</span> <span class="i">PeriodicTable::GetElementPropertiesNames</span><span class="s">(</span><span class="q">'Alphabetical'</span><span class="s">)</span><span class="sc">;</span> 399 <span class="s">}</span> 400 <span class="k">else</span> <span class="s">{</span> 401 <span class="k">push</span> <span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedProperies</span>}}<span class="cm">,</span> <span class="i">PeriodicTable::GetElementPropertiesNames</span><span class="s">(</span><span class="s">)</span><span class="sc">;</span> 402 <span class="s">}</span> 403 <span class="k">push</span> <span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedProperies</span>}}<span class="cm">,</span> <span class="q">'NaturalIsotopeData'</span><span class="sc">;</span> 404 <span class="s">}</span> 405 <span class="k">else</span> <span class="s">{</span> 406 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">properties</span>}<span class="s">)</span> <span class="s">{</span> 407 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">propertiesmode</span>} =~ <span class="q">/^Categories$/i</span><span class="s">)</span> <span class="s">{</span> 408 <span class="c"># Check category name...</span> 409 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">properties</span>} !~ <span class="q">/^(Basic|BasicAndNaturalIsotope|NaturalIsotope)$/i</span><span class="s">)</span> <span class="s">{</span> 410 <span class="k">die</span> <span class="q">"Error: The value specified, $Options{properties}, for option \"-p --properties\" in conjunction with \"Categories\" value for option \"--propertiesmode\" is not valid. Allowed values: Basic, BasicAndNaturalIsotope, NaturalIsotope\n"</span><span class="sc">;</span> 411 <span class="s">}</span> 412 <span class="c"># Set propertynames...</span> 413 <span class="k">push</span> <span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedProperies</span>}}<span class="cm">,</span> <span class="i">GetPropertyNamesFromCategories</span><span class="s">(</span><span class="i">$Options</span>{<span class="w">properties</span>}<span class="s">)</span><span class="sc">;</span> 414 <span class="s">}</span> 415 <span class="k">else</span> <span class="s">{</span> 416 <span class="c"># Check property names..</span> 417 <span class="k">my</span><span class="s">(</span><span class="i">$Name</span><span class="cm">,</span> <span class="i">$PropertyName</span><span class="cm">,</span> <span class="i">@Names</span><span class="s">)</span><span class="sc">;</span> 418 <span class="i">@Names</span> = <span class="k">split</span> <span class="q">/\,/</span><span class="cm">,</span> <span class="i">$Options</span>{<span class="w">properties</span>}<span class="sc">;</span> 419 <span class="j">NAME:</span> <span class="k">for</span> <span class="i">$Name</span> <span class="s">(</span><span class="i">@Names</span><span class="s">)</span> <span class="s">{</span> 420 <span class="i">$PropertyName</span> = <span class="i">RemoveLeadingAndTrailingWhiteSpaces</span><span class="s">(</span><span class="i">$Name</span><span class="s">)</span><span class="sc">;</span> 421 <span class="k">if</span> <span class="s">(</span><span class="i">$PropertyName</span> =~ <span class="q">/^NaturalIsotopeData$/i</span><span class="s">)</span> <span class="s">{</span> 422 <span class="k">push</span> <span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedProperies</span>}}<span class="cm">,</span> <span class="i">$PropertyName</span><span class="sc">;</span> 423 <span class="k">next</span> <span class="j">NAME</span><span class="sc">;</span> 424 <span class="s">}</span> 425 <span class="k">if</span> <span class="s">(</span><span class="i">PeriodicTable::IsElementProperty</span><span class="s">(</span><span class="i">$PropertyName</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span> 426 <span class="k">push</span> <span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedProperies</span>}}<span class="cm">,</span> <span class="i">$PropertyName</span><span class="sc">;</span> 427 <span class="s">}</span> 428 <span class="k">else</span> <span class="s">{</span> 429 <span class="k">warn</span> <span class="q">"Warning: Ignoring value, $Name, specifed by \"-p --properties\" option: Unknown property name...\n"</span><span class="sc">;</span> 430 <span class="s">}</span> 431 <span class="s">}</span> 432 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">propertieslisting</span>} =~ <span class="q">/^Alphabetical$/i</span><span class="s">)</span> <span class="s">{</span> 433 <span class="c"># AtomicNumber, ElementSymbol and ElementName are always listed first and</span> 434 <span class="c"># NaturalIsotopeData in the end...</span> 435 <span class="k">my</span><span class="s">(</span><span class="i">$AtomicNumberPresent</span><span class="cm">,</span> <span class="i">$ElementSymbolPresent</span><span class="cm">,</span> <span class="i">$ElementNamePresent</span><span class="cm">,</span> <span class="i">$NaturalIsotopeDataPresent</span><span class="cm">,</span> <span class="i">@AlphabeticalProperties</span><span class="cm">,</span> <span class="i">%PropertiesMap</span><span class="s">)</span><span class="sc">;</span> 436 <span class="i">%PropertiesMap</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span> 437 <span class="i">@AlphabeticalProperties</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span> 438 <span class="i">$AtomicNumberPresent</span> = <span class="n">0</span><span class="sc">;</span> <span class="i">$ElementSymbolPresent</span> = <span class="n">0</span><span class="sc">;</span> <span class="i">$ElementNamePresent</span> = <span class="n">0</span><span class="sc">;</span> <span class="i">$NaturalIsotopeDataPresent</span> = <span class="n">0</span><span class="sc">;</span> 439 <span class="j">NAME:</span> <span class="k">for</span> <span class="i">$Name</span> <span class="s">(</span><span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedProperies</span>}}<span class="s">)</span> <span class="s">{</span> 440 <span class="k">if</span> <span class="s">(</span><span class="i">$Name</span> =~ <span class="q">/^AtomicNumber$/i</span><span class="s">)</span> <span class="s">{</span> 441 <span class="i">$AtomicNumberPresent</span> = <span class="n">1</span><span class="sc">;</span> 442 <span class="k">next</span> <span class="j">NAME</span><span class="sc">;</span> 443 <span class="s">}</span> 444 <span class="k">if</span> <span class="s">(</span><span class="i">$Name</span> =~ <span class="q">/^ElementSymbol$/i</span><span class="s">)</span> <span class="s">{</span> 445 <span class="i">$ElementSymbolPresent</span> = <span class="n">1</span><span class="sc">;</span> 446 <span class="k">next</span> <span class="j">NAME</span><span class="sc">;</span> 447 <span class="s">}</span> 448 <span class="k">if</span> <span class="s">(</span><span class="i">$Name</span> =~ <span class="q">/^ElementName$/i</span><span class="s">)</span> <span class="s">{</span> 449 <span class="i">$ElementNamePresent</span> = <span class="n">1</span><span class="sc">;</span> 450 <span class="k">next</span> <span class="j">NAME</span><span class="sc">;</span> 451 <span class="s">}</span> 452 <span class="k">if</span> <span class="s">(</span><span class="i">$Name</span> =~ <span class="q">/^NaturalIsotopeData$/i</span><span class="s">)</span> <span class="s">{</span> 453 <span class="i">$NaturalIsotopeDataPresent</span> = <span class="n">1</span><span class="sc">;</span> 454 <span class="k">next</span> <span class="j">NAME</span><span class="sc">;</span> 455 <span class="s">}</span> 456 <span class="i">$PropertiesMap</span>{<span class="i">$Name</span>} = <span class="i">$Name</span><span class="sc">;</span> 457 <span class="s">}</span> 458 <span class="c"># Setup the alphabetical list...</span> 459 <span class="k">if</span> <span class="s">(</span><span class="i">$AtomicNumberPresent</span><span class="s">)</span> <span class="s">{</span> 460 <span class="k">push</span> <span class="i">@AlphabeticalProperties</span><span class="cm">,</span> <span class="q">'AtomicNumber'</span><span class="sc">;</span> 461 <span class="s">}</span> 462 <span class="k">if</span> <span class="s">(</span><span class="i">$ElementSymbolPresent</span><span class="s">)</span> <span class="s">{</span> 463 <span class="k">push</span> <span class="i">@AlphabeticalProperties</span><span class="cm">,</span> <span class="q">'ElementSymbol'</span><span class="sc">;</span> 464 <span class="s">}</span> 465 <span class="k">if</span> <span class="s">(</span><span class="i">$ElementNamePresent</span><span class="s">)</span> <span class="s">{</span> 466 <span class="k">push</span> <span class="i">@AlphabeticalProperties</span><span class="cm">,</span> <span class="q">'ElementName'</span><span class="sc">;</span> 467 <span class="s">}</span> 468 <span class="k">for</span> <span class="i">$Name</span> <span class="s">(</span><span class="k">sort</span> <span class="k">keys</span> <span class="i">%PropertiesMap</span><span class="s">)</span> <span class="s">{</span> 469 <span class="k">push</span> <span class="i">@AlphabeticalProperties</span><span class="cm">,</span> <span class="i">$Name</span><span class="sc">;</span> 470 <span class="s">}</span> 471 <span class="k">if</span> <span class="s">(</span><span class="i">$NaturalIsotopeDataPresent</span><span class="s">)</span> <span class="s">{</span> 472 <span class="k">push</span> <span class="i">@AlphabeticalProperties</span><span class="cm">,</span> <span class="q">'NaturalIsotopeData'</span><span class="sc">;</span> 473 <span class="s">}</span> 474 <span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedProperies</span>}} = <span class="s">(</span><span class="s">)</span><span class="sc">;</span> 475 <span class="k">push</span> <span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedProperies</span>}}<span class="cm">,</span> <span class="i">@AlphabeticalProperties</span><span class="sc">;</span> 476 <span class="s">}</span> 477 <span class="s">}</span> 478 <span class="s">}</span> 479 <span class="k">else</span> <span class="s">{</span> 480 <span class="c"># Set default value...</span> 481 <span class="k">push</span> <span class="i">@</span>{<span class="i">$OptionsInfo</span>{<span class="w">SpecifiedProperies</span>}}<span class="cm">,</span> <span class="i">GetPropertyNamesFromCategories</span><span class="s">(</span><span class="q">'Basic'</span><span class="s">)</span><span class="sc">;</span> 482 <span class="s">}</span> 483 <span class="s">}</span> 484 <span class="s">}</span> 485 486 <span class="c"># Setup script usage and retrieve command line arguments specified using various options...</span> <a name="SetupScriptUsage-"></a> 487 <span class="k">sub </span><span class="m">SetupScriptUsage</span> <span class="s">{</span> 488 489 <span class="c"># Retrieve all the options...</span> 490 <span class="i">%Options</span> = <span class="s">(</span><span class="s">)</span><span class="sc">;</span> 491 <span class="i">$Options</span>{<span class="w">mode</span>} = <span class="q">"ElementID"</span><span class="sc">;</span> 492 <span class="i">$Options</span>{<span class="w">outdelim</span>} = <span class="q">"comma"</span><span class="sc">;</span> 493 <span class="i">$Options</span>{<span class="w">output</span>} = <span class="q">"STDOUT"</span><span class="sc">;</span> 494 <span class="i">$Options</span>{<span class="w">outputstyle</span>} = <span class="q">"ElementBlock"</span><span class="sc">;</span> 495 <span class="i">$Options</span>{<span class="w">precision</span>} = <span class="n">4</span><span class="sc">;</span> 496 <span class="i">$Options</span>{<span class="w">propertiesmode</span>} = <span class="q">"Categories"</span><span class="sc">;</span> 497 <span class="i">$Options</span>{<span class="w">propertieslisting</span>} = <span class="q">"ByGroup"</span><span class="sc">;</span> 498 <span class="i">$Options</span>{<span class="w">quote</span>} = <span class="q">"yes"</span><span class="sc">;</span> 499 500 <span class="k">if</span> <span class="s">(</span>!<span class="i">GetOptions</span><span class="s">(</span>\<span class="i">%Options</span><span class="cm">,</span> <span class="q">"help|h"</span><span class="cm">,</span> <span class="q">"mode|m=s"</span><span class="cm">,</span> <span class="q">"outdelim=s"</span><span class="cm">,</span> <span class="q">"output=s"</span><span class="cm">,</span> <span class="q">"outputstyle=s"</span><span class="cm">,</span> <span class="q">"overwrite|o"</span><span class="cm">,</span> <span class="q">"precision=i"</span><span class="cm">,</span> <span class="q">"properties|p=s"</span><span class="cm">,</span> <span class="q">"propertieslisting=s"</span><span class="cm">,</span> <span class="q">"propertiesmode=s"</span><span class="cm">,</span> <span class="q">"quote|q=s"</span><span class="cm">,</span> <span class="q">"root|r=s"</span><span class="cm">,</span> <span class="q">"workingdir|w=s"</span><span class="s">)</span><span class="s">)</span> <span class="s">{</span> 501 <span class="k">die</span> <span class="q">"\nTo get a list of valid options and their values, use \"$ScriptName -h\" or\n\"perl -S $ScriptName -h\" command and try again...\n"</span><span class="sc">;</span> 502 <span class="s">}</span> 503 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">workingdir</span>}<span class="s">)</span> <span class="s">{</span> 504 <span class="k">if</span> <span class="s">(</span>! <span class="k">-d</span> <span class="i">$Options</span>{<span class="w">workingdir</span>}<span class="s">)</span> <span class="s">{</span> 505 <span class="k">die</span> <span class="q">"Error: The value specified, $Options{workingdir}, for option \"-w --workingdir\" is not a directory name.\n"</span><span class="sc">;</span> 506 <span class="s">}</span> 507 <span class="k">chdir</span> <span class="i">$Options</span>{<span class="w">workingdir</span>} <span class="k">or</span> <span class="k">die</span> <span class="q">"Error: Couldn't chdir $Options{workingdir}: $! \n"</span><span class="sc">;</span> 508 <span class="s">}</span> 509 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">mode</span>} !~ <span class="q">/^(ElementID|AmericanGroupLabel|EuropeanGroupLabel|GroupNumber|GroupName|PeriodNumber|All)$/i</span><span class="s">)</span> <span class="s">{</span> 510 <span class="k">die</span> <span class="q">"Error: The value specified, $Options{mode}, for option \"-m --mode\" is not valid. Allowed values: ElementID, AmericanGroupLabel, EuropeanGroupLabel, GroupNumber, GroupName, PeriodNumber, or All\n"</span><span class="sc">;</span> 511 <span class="s">}</span> 512 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">outdelim</span>} !~ <span class="q">/^(comma|semicolon|tab)$/i</span><span class="s">)</span> <span class="s">{</span> 513 <span class="k">die</span> <span class="q">"Error: The value specified, $Options{outdelim}, for option \"--outdelim\" is not valid. Allowed values: comma, tab, or semicolon\n"</span><span class="sc">;</span> 514 <span class="s">}</span> 515 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">output</span>} !~ <span class="q">/^(STDOUT|File)$/i</span><span class="s">)</span> <span class="s">{</span> 516 <span class="k">die</span> <span class="q">"Error: The value specified, $Options{output}, for option \"--output\" is not valid. Allowed values: STDOUT or File\n"</span><span class="sc">;</span> 517 <span class="s">}</span> 518 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">outputstyle</span>} !~ <span class="q">/^(ElementBlock|ElementRows)$/i</span><span class="s">)</span> <span class="s">{</span> 519 <span class="k">die</span> <span class="q">"Error: The value specified, $Options{outputstyle}, for option \"--outputstyle\" is not valid. Allowed values: ElementBlock or ElementRows\n"</span><span class="sc">;</span> 520 <span class="s">}</span> 521 <span class="k">if</span> <span class="s">(</span>!<span class="i">IsPositiveInteger</span><span class="s">(</span><span class="i">$Options</span>{<span class="w">precision</span>}<span class="s">)</span><span class="s">)</span> <span class="s">{</span> 522 <span class="k">die</span> <span class="q">"Error: The value specified, $Options{precision}, for option \"-p --precision\" is not valid. Allowed values: > 0 \n"</span><span class="sc">;</span> 523 <span class="s">}</span> 524 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">propertiesmode</span>} !~ <span class="q">/^(Categories|Names|All)$/i</span><span class="s">)</span> <span class="s">{</span> 525 <span class="k">die</span> <span class="q">"Error: The value specified, $Options{propertiesmode}, for option \"--propertiesmode\" is not valid. Allowed values: Categories, Names, or All\n"</span><span class="sc">;</span> 526 <span class="s">}</span> 527 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">propertieslisting</span>} !~ <span class="q">/^(ByGroup|Alphabetical)$/i</span><span class="s">)</span> <span class="s">{</span> 528 <span class="k">die</span> <span class="q">"Error: The value specified, $Options{propertieslisting}, for option \"--propertieslisting\" is not valid. Allowed values: ByGroup, or Alphabetical\n"</span><span class="sc">;</span> 529 <span class="s">}</span> 530 <span class="k">if</span> <span class="s">(</span><span class="i">$Options</span>{<span class="w">quote</span>} !~ <span class="q">/^(yes|no)$/i</span><span class="s">)</span> <span class="s">{</span> 531 <span class="k">die</span> <span class="q">"Error: The value specified, $Options{quote}, for option \"-q --quote\" is not valid. Allowed values: yes or no\n"</span><span class="sc">;</span> 532 <span class="s">}</span> 533 <span class="s">}</span> 534 <a name="EOF-"></a></pre> <p> </p> <br /> <center> <img src="../../../images/h2o2.png"> </center> </body> </html>