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<h2>NAME</h2>
<p>JoinSDFiles.pl - Join multiple SDFiles into a single SDFile</p>
<p>
</p>
<h2>SYNOPSIS</h2>
<p>JoinSDFiles.pl  SDFiles...</p>
<p>JoinSDFiles.pl [<strong>-h, --help</strong>] [<strong>-o, --overwrite</strong>] [<strong>-r, --root</strong> rootname]
[<strong>-w, --workingdir</strong> dirname] SDFiles...</p>
<p>
</p>
<h2>DESCRIPTION</h2>
<p>Multiple <em>SDFiles</em> are joined to generate a single SDFile. The file names
are separated by spaces. The valid file extensions are <em>.sdf</em> and <em>.sd</em>.
All other file names are ignored. All the SD files in a current directory can be
specified either by <em>*.sdf</em> or the current directory name.</p>
<p>
</p>
<h2>OPTIONS</h2>
<dl>
<dt><strong><strong>-h, --help</strong></strong></dt>
<dd>
<p>Print this help message.</p>
</dd>
<dt><strong><strong>-o, --overwrite</strong></strong></dt>
<dd>
<p>Overwrite existing files.</p>
</dd>
<dt><strong><strong>-r, --root</strong> <em>rootname</em></strong></dt>
<dd>
<p>New SD file name is generated using the root: &lt;Root&gt;.sdf. Default file
name:&lt;FirstSDFileName&gt;1To&lt;Count&gt;Joined.sdf.</p>
</dd>
<dt><strong><strong>-w, --workingdir</strong> <em>dirname</em></strong></dt>
<dd>
<p>Location of working directory. Default: current directory.</p>
</dd>
</dl>
<p>
</p>
<h2>EXAMPLES</h2>
<p>To join SD files, type:</p>
<div class="ExampleBox">
    % JoinSDFiles.pl -o Sample1.sdf Sample2.sdf
    <br/>% JoinSDFiles.pl -o *.sdf</div>
<p>To join all Sample*.sdf files in a directory, SomeDir, and generate a new file NewSample.sdf, type:</p>
<div class="ExampleBox">
    % JoinSDFiles.pl -r NewSample -w SomeDir -o *.sdf</div>
<p>
</p>
<h2>AUTHOR</h2>
<p><a href="mailto:msud@san.rr.com">Manish Sud</a></p>
<p>
</p>
<h2>SEE ALSO</h2>
<p><a href="./InfoSDFiles.html">InfoSDFiles.pl</a>,&nbsp<a href="./MolFilesToSD.html">MolFilesToSD.pl</a>,&nbsp<a href="./SDToMolFiles.html">SDToMolFiles.pl</a>,&nbsp<a href="./SplitSDFiles.html">SplitSDFiles.pl</a>
</p>
<p>
</p>
<h2>COPYRIGHT</h2>
<p>Copyright (C) 2015 Manish Sud. All rights reserved.</p>
<p>This file is part of MayaChemTools.</p>
<p>MayaChemTools is free software; you can redistribute it and/or modify it under
the terms of the GNU Lesser General Public License as published by the Free
Software Foundation; either version 3 of the License, or (at your option)
any later version.</p>
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<tr align="left" valign="top"><td width="33%" align="left"><a href="./InfoTextFiles.html" title="InfoTextFiles.html">Previous</a>&nbsp;&nbsp;<a href="./index.html" title="Table of Contents">TOC</a>&nbsp;&nbsp;<a href="./JoinTextFiles.html" title="JoinTextFiles.html">Next</a></td><td width="34%" align="middle"><strong>March 29, 2015</strong></td><td width="33%" align="right"><strong>JoinSDFiles.pl</strong></td></tr>
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