diff bin/TextFilesToHTML.pl @ 0:4816e4a8ae95 draft default tip

Uploaded

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/bin/TextFilesToHTML.pl	Wed Jan 20 09:23:18 2016 -0500
@@ -0,0 +1,1283 @@
+#!/usr/bin/perl -w
+#
+# $RCSfile: TextFilesToHTML.pl,v $
+# $Date: 2015/02/28 20:46:21 $
+# $Revision: 1.41 $
+#
+# Author: Manish Sud <[e-mail]>
+#
+# Copyright (C) 2015 Manish Sud. All rights reserved.
+#
+# This file is part of MayaChemTools.
+#
+# MayaChemTools is free software; you can redistribute it and/or modify it under
+# the terms of the GNU Lesser General Public License as published by the Free
+# Software Foundation; either version 3 of the License, or (at your option) any
+# later version.
+#
+# MayaChemTools is distributed in the hope that it will be useful, but without
+# any warranty; without even the implied warranty of merchantability of fitness
+# for a particular purpose.  See the GNU Lesser General Public License for more
+# details.
+#
+# You should have received a copy of the GNU Lesser General Public License
+# along with MayaChemTools; if not, see <http://www.gnu.org/licenses/> or
+# write to the Free Software Foundation Inc., 59 Temple Place, Suite 330,
+# Boston, MA, 02111-1307, USA.
+#
+
+use strict;
+use FindBin; use lib "$FindBin::Bin/../lib";
+use Getopt::Long;
+use File::Basename;
+use Text::ParseWords;
+use Benchmark;
+use FileUtil;
+use TextUtil;
+use HTMLUtil;
+
+my($ScriptName, %Options, $StartTime, $EndTime, $TotalTime);
+
+# Autoflush STDOUT
+$| = 1;
+
+# Starting message...
+$ScriptName = basename($0);
+print "\n$ScriptName: Starting...\n\n";
+$StartTime = new Benchmark;
+
+# Get the options and setup script...
+SetupScriptUsage();
+if ($Options{help} || @ARGV < 1) {
+  die GetUsageFromPod("$FindBin::Bin/$ScriptName");
+}
+
+my(@TextFilesList);
+@TextFilesList = ExpandFileNames(\@ARGV, "csv tsv");
+
+print "Processing options...\n";
+my(%OptionsInfo);
+ProcessOptions();
+
+print "Checking input text file(s)...\n";
+my(%TextFilesInfo);
+RetrieveTextFilesInfo();
+SetupCoulmnsTablesAndMiscInfo();
+
+# Generate output files...
+my($FileIndex);
+if (@TextFilesList > 1) {
+  print "\nProcessing text files...\n";
+}
+for $FileIndex (0 .. $#TextFilesList) {
+  if ($TextFilesInfo{FileOkay}[$FileIndex]) {
+    print "\nProcessing file $TextFilesList[$FileIndex]...\n";
+    GenerateHTMLTable($FileIndex);
+  }
+}
+print "\n$ScriptName:Done...\n\n";
+
+$EndTime = new Benchmark;
+$TotalTime = timediff ($EndTime, $StartTime);
+print "Total time: ", timestr($TotalTime), "\n";
+
+###############################################################################
+
+# Generate HTML table(s)...
+sub GenerateHTMLTable {
+  my($Index) = @_;
+
+  if ($TextFilesInfo{MultipleHTMLTables}[$Index]) {
+    GenerateMultipleHTMLTable($Index);
+  }
+  else {
+    GenerateOneHTMLTable($Index);
+  }
+}
+
+# Generate one table...
+sub GenerateOneHTMLTable {
+  my($Index) = @_;
+  my($TextFile, $TopHTMLDir, $HTMLFile, $Line, $StartRowNum, $EndRowNum, $CSSFile, $CSSFilePath, $CSSRef);
+
+  $HTMLFile = $TextFilesInfo{HTMLRoot}[$Index] . ".html";
+  $TextFile = $TextFilesList[$Index];
+
+  # Setup data directories...
+  ($TopHTMLDir) = SetupDataDirs($Index);
+
+  # Setup stylesheet file...
+  $CSSRef = "";
+  if ($Options{stylesheet} =~ /^new$/i) {
+    $CSSFile = $TextFilesInfo{HTMLRoot}[$Index] . ".css"; $CSSRef = ".\/" . "$CSSFile";
+    $CSSFilePath = "$TopHTMLDir" . "\/" . $CSSFile;
+    GenerateStyleSheetFile($CSSFilePath);
+  }
+  elsif ($Options{stylesheet} =~ /^old$/i) {
+    $CSSRef = $Options{stylesheetname};
+  }
+  # Set HTML file location...
+  $HTMLFile = "$TopHTMLDir" . "\/" . $HTMLFile;
+
+  print "Generating HTML file $HTMLFile...\n";
+  open HTMLFILE, ">$HTMLFile" or die "Error: Can't open $HTMLFile: $! \n";
+  open TEXTFILE, "$TextFile" or die "Error: Can't open $TextFile: $! \n";
+
+  # Write out HTML page header...
+  print HTMLFILE SetupHTMLPageHeader($TextFilesInfo{HTMLTitle}[$Index], $CSSRef);
+  if ($OptionsInfo{TitleDisplay}) {
+    print HTMLFILE SetupHTMLPageTitle($TextFilesInfo{HTMLTitle}[$Index]);
+  }
+  else {
+    print HTMLFILE SetupHTMLEmptyLines(1);
+  }
+
+  # Start the table...
+  print HTMLFILE SetupHTMLAlignmentBegin("center");
+  print HTMLFILE SetupHTMLTableHeader($OptionsInfo{TableBorder}, $OptionsInfo{TableCellPadding}, $OptionsInfo{TableCellSpacing});
+
+  WriteColLabels($Index, \*TEXTFILE, \*HTMLFILE);
+
+  # Skip the labels and write out all the other rows...
+  $Line = <TEXTFILE>;
+  $StartRowNum = 1;
+  $EndRowNum = $TextFilesInfo{LineCount}[$Index];
+  WriteRowValues($Index, $StartRowNum, $EndRowNum, \*TEXTFILE, \*HTMLFILE);
+
+  # Finish up the table...
+  print HTMLFILE SetupHTMLTableEnd();
+  print HTMLFILE SetupHTMLAlignmentEnd("center");
+
+  # Write out HTML page end...
+  print HTMLFILE SetupHTMLPageEnd($OptionsInfo{Footer});
+
+  close HTMLFILE;
+  close TEXTFILE;
+}
+
+# Generate multiple tables...
+sub GenerateMultipleHTMLTable {
+  my($Index) = @_;
+  my($TopHTMLDir, $SubHTMLDir, $TextFile, $HTMLFile, $TableNum, $TableCount, $TableIndex, $TableStartLineNum, $TableEndLineNum, $Line, $InSubHTMLDir, $PrintMsg, $CSSFile, $CSSFilePath, $CSSRef, $NewStyleSheet);
+
+  # Open text file and skip over label line...
+  $TextFile = $TextFilesList[$Index];
+  open TEXTFILE, "$TextFile" or die "Error: Can't open $TextFile: $! \n";
+  $Line = <TEXTFILE>;
+
+  # Set up data directories to hold various html files...
+  ($TopHTMLDir, $SubHTMLDir) = SetupDataDirs($Index);
+
+  # Create stylesheet file...
+  $CSSRef = "";
+  $NewStyleSheet = 0;
+  if ($Options{stylesheet} =~ /^new$/i) {
+    $NewStyleSheet = 1;
+    $CSSFile = $TextFilesInfo{HTMLRoot}[$Index] . ".css";
+    $CSSFilePath = "$TopHTMLDir" . "\/" . $CSSFile;
+    GenerateStyleSheetFile($CSSFilePath);
+  }
+  elsif ($Options{stylesheet} =~ /^old$/i) {
+    $CSSRef = $Options{stylesheetname};
+  }
+
+  $PrintMsg = 1;
+  # Generate HTML files for all the tables...
+  $TableCount = $TextFilesInfo{TableCount}[$Index];
+  for $TableNum (1 .. $TableCount) {
+    $TableIndex = $TableNum - 1;
+    $HTMLFile = ${$TextFilesInfo{TableHTMLFiles}[$Index]}[$TableIndex];
+    $TableStartLineNum = ${$TextFilesInfo{TableStartLineNum}[$Index]}[$TableIndex];
+    $TableEndLineNum = ${$TextFilesInfo{TableEndLineNum}[$Index]}[$TableIndex];
+
+    # Setup file name...
+    if ($TableNum == 1) {
+      $HTMLFile = "$TopHTMLDir" . "\/" . $HTMLFile;
+      print "Generating HTML file $HTMLFile...\n";
+    }
+    else {
+      $HTMLFile = "$SubHTMLDir" . "\/" . $HTMLFile;
+      if ($PrintMsg) {
+	$PrintMsg = 0;
+	if ($TableCount == 2) {
+	  print "Generating HTML file $HTMLFile...\n";
+	}
+	else {
+	  print "Generating ", ($TableCount - 1), " other HTML files: $SubHTMLDir\/$TextFilesInfo{HTMLRoot}[$Index]\*.html...\n";
+	}
+      }
+    }
+    # Setup stylesheet reference...
+    if ($NewStyleSheet) {
+      $CSSRef = ($TableNum == 1) ? ".\/" : "..\/";
+      $CSSRef .= $CSSFile;
+    }
+
+    open HTMLFILE, ">$HTMLFile" or die "Error: Can't open $HTMLFile: $! \n";
+    # Write out HTML page header...
+    print HTMLFILE SetupHTMLPageHeader($TextFilesInfo{HTMLTitle}[$Index], $CSSRef);
+
+    # Set up the navigation links for this table...
+    if ($OptionsInfo{NavLinksAtTop}) {
+      WriteNavigationLinks($Index, $TableNum, \*HTMLFILE);
+    }
+    # Setup page title...
+    if ($OptionsInfo{TitleDisplay}) {
+      print HTMLFILE SetupHTMLPageTitle($TextFilesInfo{HTMLTitle}[$Index]);
+    }
+    else {
+      print HTMLFILE SetupHTMLEmptyLines(1);
+    }
+
+    # Start the table...
+    print HTMLFILE SetupHTMLAlignmentBegin("center");
+    print HTMLFILE SetupHTMLTableHeader($OptionsInfo{TableBorder}, $OptionsInfo{TableCellPadding}, $OptionsInfo{TableCellSpacing});
+
+    WriteColLabels($Index, \*TEXTFILE, \*HTMLFILE);
+
+    # Write out appropriate row data for this table...
+    WriteRowValues($Index, $TableStartLineNum, $TableEndLineNum, \*TEXTFILE, \*HTMLFILE);
+
+    # Finish up the table...
+    print HTMLFILE SetupHTMLTableEnd();
+    print HTMLFILE SetupHTMLAlignmentEnd("center");
+
+    # Set up the navigation links for this table...
+    if ($OptionsInfo{NavLinksAtBottom}) {
+      print HTMLFILE SetupHTMLEmptyLines(1);
+      WriteNavigationLinks($Index, $TableNum, \*HTMLFILE);
+    }
+
+    # Write out HTML page end...
+    print HTMLFILE SetupHTMLPageEnd($OptionsInfo{Footer});
+    close HTMLFILE;
+  }
+  close TEXTFILE;
+
+}
+
+# Create stylesheet file...
+sub GenerateStyleSheetFile {
+  my($CSSFile) = @_;
+    print "Generating stylesheet file $CSSFile...\n";
+    open CSSFILE, ">$CSSFile" or die "Error: Can't open $CSSFile: $! \n";
+    print CSSFILE SetupHTMLStyleSheetTags();
+    close CSSFILE;
+}
+
+# Write out table header using column labels...
+sub WriteColLabels {
+  my($Index, $TextFileRef, $HTMLFileRef) = @_;
+  my(@ColLabels, $Label);
+
+  print $HTMLFileRef $TextFilesInfo{TableRowHeaderTags};
+
+  @ColLabels = @{$TextFilesInfo{ColLabels}[$Index]};
+  for $Label (@ColLabels) {
+    print $HTMLFileRef SetupHTMLTableRowHeaderValue($Label);
+  }
+  print $HTMLFileRef $TextFilesInfo{RowEndTags};
+}
+
+#Write out the rows value...
+sub WriteRowValues {
+  my($Index, $StartRowNum, $EndRowNum, $TextFileRef, $HTMLFileRef) = @_;
+  my($ColNum, $BackgroundColor, $FontColor, $LineCount, $Line, @RowValues, $Value, $InDelim, $LastColNum);
+
+  $InDelim = $TextFilesInfo{InDelim}[$Index];
+  $LastColNum = @{$TextFilesInfo{ColLabels}[$Index]} - 1;
+
+  for $LineCount ($StartRowNum .. $EndRowNum) {
+    $Line = GetTextLine($TextFileRef);
+
+    if ($OptionsInfo{ShadeRowsStatus}) {
+      print $HTMLFileRef ($LineCount % 2) ? $TextFilesInfo{BgFilledOddRowHeaderTags} : $TextFilesInfo{BgFilledEvenRowHeaderTags};
+    }
+    else {
+      print $HTMLFileRef $TextFilesInfo{RowHeaderTags};
+    }
+    @RowValues = quotewords($InDelim, 0, $Line);
+    for $ColNum (0 .. $LastColNum) {
+      $Value = ($ColNum <= $#RowValues) ? $RowValues[$ColNum] : "";
+      $BackgroundColor = ""; $FontColor = "";
+      if ($OptionsInfo{HighlightStatus}) {
+	if (exists($TextFilesInfo{HightlightColNumMap}[$Index]{$ColNum})) {
+	  ($BackgroundColor, $FontColor) = GetValueHighlightColors($Index, $ColNum, $Value);
+	}
+      }
+      print $HTMLFileRef SetupHTMLTableRowDataValue($Value, $BackgroundColor, $FontColor);
+    }
+    print $HTMLFileRef $TextFilesInfo{RowEndTags};
+  }
+}
+
+# Setup navigation link information for each table.
+#
+# All table sets besides first and last have these links: FirstTable, Previous, Current-1,Current,Current+1,  Next, and LastTable
+# First set: Current, Next, and LastTable
+# Last set: FirstTable, Previous and Current.
+#
+sub WriteNavigationLinks {
+  my($Index, $CurTableNum, $HTMLFileRef) = @_;
+  my($TableNum, $StartTableNum, $EndTableNum, $TableIndex, $BorderWidth, $CellPadding, $CellSpacing,$HTMLFile, $HTMLRefFile, $RelativeFileDir, $HTMLRefValue, $FirstTableNum, $FirstTableIndex, $LastTableNum, $LastTableIndex, $TableStartLineNum, $TableEndLineNum, $LastLineNum, $BGColor, $LinksOffSet);
+
+  $LinksOffSet = 10;
+
+  $FirstTableNum = 1; $FirstTableIndex = $FirstTableNum - 1;
+  $LastTableNum = $TextFilesInfo{TableCount}[$Index]; $LastTableIndex = $LastTableNum - 1;
+  $LastLineNum = ${$TextFilesInfo{TableEndLineNum}[$Index]}[$LastTableIndex];
+
+  # Figure out which links to display for a particular table...
+  $StartTableNum = $CurTableNum - $LinksOffSet + 1;
+  $StartTableNum = ($StartTableNum < $FirstTableNum) ? $FirstTableNum : $StartTableNum;
+  if ($CurTableNum < $LinksOffSet) {
+    $EndTableNum = $LinksOffSet;
+  }
+  else {
+    $EndTableNum = $CurTableNum + $LinksOffSet - 1;
+  }
+  $EndTableNum = ($EndTableNum > $LastTableNum) ? $LastTableNum : $EndTableNum;
+
+  my($InactiveLinkNumColor, $InactiveLinkFontBold) = ("#8e2323", "1");
+  my($LinkTextColor, $LinkBGColor, $LinkFontBold) = ("", "", "1");
+
+  # Start link table...
+  $BorderWidth = 0; $CellPadding = 2; $CellSpacing = 2;
+  print $HTMLFileRef SetupHTMLAlignmentBegin("center");
+  print $HTMLFileRef SetupHTMLDivBegin("tablenav");
+  print $HTMLFileRef  SetupHTMLTableHeader($BorderWidth, $CellPadding, $CellSpacing);
+  print $HTMLFileRef $TextFilesInfo{RowHeaderTags};
+
+  if ($OptionsInfo{NavLinksTableInfo} && $OptionsInfo{NavLinksLineInfo}) {
+    print $HTMLFileRef SetupHTMLTableRowDataValue("Showing table $CurTableNum of $LastTableNum");
+    print $HTMLFileRef SetupHTMLTableRowDataValue("&nbsp");
+    print $HTMLFileRef SetupHTMLTableRowDataValue("&nbsp");
+  }
+
+  print $HTMLFileRef SetupHTMLTableRowDataValue("Tables: ");
+  # Setup a link to first table...
+  if ($StartTableNum != $FirstTableNum) {
+    $HTMLFile = ${$TextFilesInfo{TableHTMLFiles}[$Index]}[$FirstTableIndex];
+    $HTMLRefFile = GetRelativeFileDir($CurTableNum, $FirstTableNum, $FirstTableNum) . $HTMLFile;
+    $TableStartLineNum = ${$TextFilesInfo{TableStartLineNum}[$Index]}[$FirstTableIndex];
+    $TableEndLineNum = ${$TextFilesInfo{TableEndLineNum}[$Index]}[$FirstTableIndex];
+    $HTMLRefValue = SetupHTMLHRef("First", $HTMLRefFile, "First Table Containing Lines $TableStartLineNum To $TableEndLineNum");
+    print $HTMLFileRef SetupHTMLTableRowDataValue($HTMLRefValue, $LinkBGColor, $LinkTextColor, $LinkFontBold);
+  }
+
+  # Setup link to previous table...
+  if ($CurTableNum != $FirstTableNum) {
+    my($PreviousTableNum, $PreviousTableIndex);
+    $PreviousTableNum = $CurTableNum - 1; $PreviousTableIndex = $PreviousTableNum - 1;
+    $HTMLFile = ${$TextFilesInfo{TableHTMLFiles}[$Index]}[$PreviousTableIndex];
+    $HTMLRefFile = GetRelativeFileDir($CurTableNum, $PreviousTableNum, $FirstTableNum) . $HTMLFile;
+    $TableStartLineNum = ${$TextFilesInfo{TableStartLineNum}[$Index]}[$PreviousTableIndex];
+    $TableEndLineNum = ${$TextFilesInfo{TableEndLineNum}[$Index]}[$PreviousTableIndex];
+    $HTMLRefValue = SetupHTMLHRef("Previous", $HTMLRefFile, "Previous Table Containing Lines $TableStartLineNum To $TableEndLineNum");
+    print $HTMLFileRef SetupHTMLTableRowDataValue($HTMLRefValue, $LinkBGColor, $LinkTextColor, $LinkFontBold);
+  }
+
+  for $TableNum ($StartTableNum .. $EndTableNum) {
+    $TableIndex = $TableNum - 1;
+    $HTMLFile = ${$TextFilesInfo{TableHTMLFiles}[$Index]}[$TableIndex];
+    if ($TableNum == $CurTableNum) {
+      print $HTMLFileRef SetupHTMLTableRowDataValue($TableNum, $LinkBGColor, $InactiveLinkNumColor, $InactiveLinkFontBold);
+    }
+    else {
+      # Setup the link...
+      my($RefTitle);
+      $TableStartLineNum = ${$TextFilesInfo{TableStartLineNum}[$Index]}[$TableIndex];
+      $TableEndLineNum = ${$TextFilesInfo{TableEndLineNum}[$Index]}[$TableIndex];
+      $RefTitle = AddNumberSuffix($TableNum) . " Table Containing Lines $TableStartLineNum To $TableEndLineNum";
+      $HTMLRefFile = GetRelativeFileDir($CurTableNum, $TableNum, $FirstTableNum) . $HTMLFile;
+      $HTMLRefValue = SetupHTMLHRef($TableNum, $HTMLRefFile, $RefTitle);
+      print $HTMLFileRef SetupHTMLTableRowDataValue($HTMLRefValue);
+    }
+  }
+
+  # Setup link to next table...
+  if ($CurTableNum != $LastTableNum) {
+    my($NextTableNum, $NextTableIndex);
+    $NextTableNum = $CurTableNum + 1; $NextTableIndex = $NextTableNum - 1;
+    $HTMLFile = ${$TextFilesInfo{TableHTMLFiles}[$Index]}[$NextTableIndex];
+    $HTMLRefFile = GetRelativeFileDir($CurTableNum, $NextTableNum, $FirstTableNum) . $HTMLFile;
+    $TableStartLineNum = ${$TextFilesInfo{TableStartLineNum}[$Index]}[$NextTableIndex];
+    $TableEndLineNum = ${$TextFilesInfo{TableEndLineNum}[$Index]}[$NextTableIndex];
+    $HTMLRefValue = SetupHTMLHRef("Next", $HTMLRefFile, "Next Table Containing Lines $TableStartLineNum To $TableEndLineNum");
+    print $HTMLFileRef SetupHTMLTableRowDataValue($HTMLRefValue, $LinkBGColor, $LinkTextColor, $LinkFontBold);
+  }
+
+  # Setup link to last table...
+  if ($EndTableNum != $LastTableNum) {
+    $HTMLFile = ${$TextFilesInfo{TableHTMLFiles}[$Index]}[$LastTableIndex];
+    $HTMLRefFile = GetRelativeFileDir($CurTableNum, $LastTableNum, $FirstTableNum) . $HTMLFile;
+    $TableStartLineNum = ${$TextFilesInfo{TableStartLineNum}[$Index]}[$LastTableIndex];
+    $TableEndLineNum = ${$TextFilesInfo{TableEndLineNum}[$Index]}[$LastTableIndex];
+    $HTMLRefValue = SetupHTMLHRef("Last", $HTMLRefFile, "Last Table Containing Lines $TableStartLineNum To $TableEndLineNum");
+    print $HTMLFileRef SetupHTMLTableRowDataValue($HTMLRefValue, $LinkBGColor, $LinkTextColor, $LinkFontBold);
+  }
+  # Setup current table info text....
+  print $HTMLFileRef SetupHTMLTableRowDataValue("&nbsp");
+  print $HTMLFileRef SetupHTMLTableRowDataValue("&nbsp");
+  $TableStartLineNum = ${$TextFilesInfo{TableStartLineNum}[$Index]}[$CurTableNum - 1];
+  $TableEndLineNum = ${$TextFilesInfo{TableEndLineNum}[$Index]}[$CurTableNum - 1];
+  if ($OptionsInfo{NavLinksLineInfo}) {
+    print $HTMLFileRef SetupHTMLTableRowDataValue("Showing lines $TableStartLineNum to $TableEndLineNum of $LastLineNum");
+  }
+  else {
+    print $HTMLFileRef SetupHTMLTableRowDataValue("Showing table $CurTableNum of $LastTableNum");
+  }
+
+  print $HTMLFileRef $TextFilesInfo{RowEndTags};
+  # End link table...
+  print $HTMLFileRef SetupHTMLTableEnd();
+  print $HTMLFileRef SetupHTMLDivEnd();
+  print $HTMLFileRef SetupHTMLAlignmentEnd("center");
+}
+
+# Generate relative directory path...
+sub GetRelativeFileDir {
+  my($FromTableNum, $ToTableNum, $FirstTableNum) = @_;
+  my($RelativeFileDir) = "";
+
+  if ($FromTableNum == $FirstTableNum) {
+    $RelativeFileDir = ($ToTableNum == $FirstTableNum) ? ".\/" : ".\/html\/";
+  }
+  else {
+    $RelativeFileDir = ($ToTableNum == $FirstTableNum) ? "..\/" : ".\/";
+  }
+  return $RelativeFileDir;
+}
+
+# Based on hightlight stype, return appropriate colors for background or text...
+sub GetValueHighlightColors {
+  my($FileIndex, $ColNum, $Value) = @_;
+  my($DataType, $Criterion, $CriterionValue, $BgColor, $FontColor, $ValueOk, $Nothing);
+
+  $BgColor = ""; $FontColor = "";
+  $DataType = ${$TextFilesInfo{HightlightDataMap}[$FileIndex]{$ColNum}}[0];
+  $Criterion = ${$TextFilesInfo{HightlightDataMap}[$FileIndex]{$ColNum}}[1];
+  $CriterionValue = ${$TextFilesInfo{HightlightDataMap}[$FileIndex]{$ColNum}}[2];
+
+  $ValueOk = 0;
+  if ($DataType =~ /^numeric$/i) {
+  NUMSWITCH: {
+      if ($Criterion =~ /^ge$/i) { $ValueOk = ($Value >= $CriterionValue) ? 1 : 0; last NUMSWITCH; }
+      if ($Criterion =~ /^le$/i) { $ValueOk = ($Value <= $CriterionValue) ? 1 : 0; last NUMSWITCH; }
+      if ($Criterion =~ /^eq$/i) { $ValueOk = ($Value == $CriterionValue) ? 1 : 0; last NUMSWITCH; }
+      $Nothing = 1;
+    }
+  }
+  else {
+  TEXTSWITCH: {
+      if ($Criterion =~ /^ge$/i) { $ValueOk = ($Value ge $CriterionValue) ? 1 : 0; last TEXTSWITCH; }
+      if ($Criterion =~ /^le$/i) { $ValueOk = ($Value le $CriterionValue) ? 1 : 0; last TEXTSWITCH; }
+      if ($Criterion =~ /^eq$/i) { $ValueOk = ($Value eq $CriterionValue) ? 1 : 0; last TEXTSWITCH; }
+      $Nothing = 1;
+    }
+  }
+  $BgColor = $ValueOk ? $OptionsInfo{ValueOkColor} : $OptionsInfo{ValueNotOkColor};
+  if ($Options{highlightstyle} =~ /^text$/i) {
+    $BgColor = "";
+    $FontColor = $ValueOk ? $OptionsInfo{ValueOkColor} : $OptionsInfo{ValueNotOkColor};
+  }
+  return ($BgColor, $FontColor);
+}
+
+# Setup columns, tables and other information...
+sub SetupCoulmnsTablesAndMiscInfo {
+  SetupColumnsToHighlightInfo();
+  SetupMultipleTablesInfo();
+  SetupHTMLTagsInfo();
+}
+
+# Setup columns to highlight information...
+sub SetupColumnsToHighlightInfo {
+  my($ColID, $DataType, $Criterion, $Value, $Index, $ColNum, $ColLabel, $ColIndex);
+
+  @{$TextFilesInfo{HightlightColNumMap}} = ();
+  @{$TextFilesInfo{HightlightDataMap}} = ();
+
+  for $Index (0 .. $#TextFilesList) {
+    %{$TextFilesInfo{HightlightColNumMap}[$Index]} = ();
+    %{$TextFilesInfo{HightlightDataMap}[$Index]} = ();
+    if ($TextFilesInfo{FileOkay}[$Index]) {
+      SPECIFIEDCOLS: for $ColIndex (0 .. $#{$OptionsInfo{SpecifiedColIds}}) {
+	$ColID = $OptionsInfo{SpecifiedColIds}[$ColIndex];
+	$DataType = $OptionsInfo{SpecifiedColDataTypes}[$ColIndex];
+	$Criterion = $OptionsInfo{SpecifiedColCriteria}[$ColIndex];
+	$Value = $OptionsInfo{SpecifiedColValues}[$ColIndex];
+	if (!$OptionsInfo{HighlightStatus}) {
+	  next SPECIFIEDCOLS;
+	}
+	if ($Options{highlightby} =~ /^colnum$/i) {
+	  $ColNum = $ColID;
+	  if ($ColNum > 0 && $ColNum <= $TextFilesInfo{ColCount}[$Index]) {
+	    $ColNum -= 1;
+	  }
+	  else {
+	    warn "Warning: Ignoring column number, $ColID, specifed in quartet, \"$ColID,$DataType,$Criterion,$Value\", using \"--highlight\" option for $TextFilesList[$Index]: it doesn't exists \n";
+	    next SPECIFIEDCOLS;
+	  }
+	}
+	else {
+	  $ColLabel = $ColID;
+	  if (exists($TextFilesInfo{ColLabelToNumMap}[$Index]{$ColLabel})) {
+	    $ColNum = $TextFilesInfo{ColLabelToNumMap}[$Index]{$ColLabel};
+	  } else {
+	    warn "Warning: Ignoring column label, $ColID, specifed in quartet, \"$ColID,$DataType,$Criterion,$Value\", using \"--highlight\" option for $TextFilesList[$Index]: it doesn't exists \n";
+	    next SPECIFIEDCOLS;
+	  }
+	}
+	$TextFilesInfo{HightlightColNumMap}[$Index]{$ColNum} = $ColNum;
+	@{$TextFilesInfo{HightlightDataMap}[$Index]{$ColNum}} =();
+	push @{$TextFilesInfo{HightlightDataMap}[$Index]{$ColNum}}, ($DataType, $Criterion, $Value);
+      }
+    }
+  }
+}
+
+# Setup navigation link information for multiple tables...
+sub SetupMultipleTablesInfo {
+  my($Index, $LinesPerTable);
+
+  $LinesPerTable = $Options{numrows};
+  @{$TextFilesInfo{TableCount}} = ();
+  @{$TextFilesInfo{TableHTMLFiles}} = ();
+  @{$TextFilesInfo{TableStartLineNum}} = ();
+  @{$TextFilesInfo{TableEndLineNum}} = ();
+
+  for $Index (0 .. $#TextFilesList) {
+    $TextFilesInfo{TableCount}[$Index] = 1;
+    @{$TextFilesInfo{TableHTMLFiles}[$Index]} = ();
+    @{$TextFilesInfo{TableStartLineNum}[$Index]} = ();
+    @{$TextFilesInfo{TableEndLineNum}[$Index]} = ();
+
+    if ($TextFilesInfo{FileOkay}[$Index]) {
+      if ($TextFilesInfo{MultipleHTMLTables}[$Index]) {
+	my($TableIndex, $TotalLines, $TableCount, $TableStartLineNum, $TableEndLineNum, $Name);
+
+	$TotalLines = $TextFilesInfo{LineCount}[$Index];
+	$TableCount = ($TotalLines % $LinesPerTable) ? (int($TotalLines/$LinesPerTable) + 1) : ($TotalLines/$LinesPerTable);
+	$TextFilesInfo{TableCount}[$Index] = $TableCount;
+	for $TableIndex (1 .. $TableCount) {
+	  $TableStartLineNum = ($TableIndex - 1) * $LinesPerTable + 1;
+	  $TableEndLineNum = ($TableIndex == $TableCount) ? $TotalLines : ($TableIndex * $LinesPerTable);
+	  push @{$TextFilesInfo{TableStartLineNum}[$Index]}, $TableStartLineNum;
+	  push @{$TextFilesInfo{TableEndLineNum}[$Index]}, $TableEndLineNum;
+
+	  # Setup HTML file names for all the tables...
+	  $Name = "Lines" . "$TableStartLineNum" . "To" . "$TableEndLineNum";
+	  if ($TableIndex == 1) {
+	    $Name = "";
+	  }
+	  $Name = $TextFilesInfo{HTMLRoot}[$Index] . $Name . ".html";
+	  push @{$TextFilesInfo{TableHTMLFiles}[$Index]}, $Name;
+	}
+	#print "$TextFilesList[$Index]: $TableCount -  @{$TextFilesInfo{TableStartLineNum}[$Index]} - @{$TextFilesInfo{TableEndLineNum}[$Index]} -  @{$TextFilesInfo{TableHTMLFiles}[$Index]}\n";
+      }
+    }
+  }
+}
+
+# Setup HTML tags information...
+sub SetupHTMLTagsInfo {
+  # Setup row tags...
+  $TextFilesInfo{RowHeaderTags} = "";
+  $TextFilesInfo{RowEndTags} = "";
+  $TextFilesInfo{BgFilledOddRowHeaderTags} = "";
+  $TextFilesInfo{BgFilledEvenRowHeaderTags} = "";
+  $TextFilesInfo{TableRowHeaderTags} = "";
+
+  $TextFilesInfo{RowHeaderTags} = SetupHTMLTableRowHeader($OptionsInfo{RowHAlignment}, "", $OptionsInfo{RowVAlignment});
+  $TextFilesInfo{RowEndTags} = SetupHTMLTableRowEnd();
+
+  if ($OptionsInfo{ShadeRowsStatus}) {
+    $TextFilesInfo{BgFilledOddRowHeaderTags} = SetupHTMLTableRowHeader($OptionsInfo{RowHAlignment}, $OptionsInfo{OddRowsShadeColor}, $OptionsInfo{RowVAlignment});
+    $TextFilesInfo{BgFilledEvenRowHeaderTags} = SetupHTMLTableRowHeader($OptionsInfo{RowHAlignment}, $OptionsInfo{EvenRowsShadeColor}, $OptionsInfo{RowVAlignment});
+  }
+
+  $TextFilesInfo{TableRowHeaderTags} = SetupHTMLTableRowHeader($OptionsInfo{TableHeaderRowHAlignment}, $OptionsInfo{TableHeaderRowColor}, $OptionsInfo{TableHeaderRowVAlignment});
+
+}
+
+#Make sure appropriate mode specific option values are specified...
+sub ProcessOptions {
+
+  %OptionsInfo = ();
+
+  $OptionsInfo{RowHAlignment} = "left"; $OptionsInfo{RowVAlignment} = "middle";
+  if (exists($Options{align})) {
+    my (@AlignValues) = split ",", $Options{align};
+    if (@AlignValues == 2) {
+      $OptionsInfo{RowHAlignment} = $AlignValues[0];
+      $OptionsInfo{RowVAlignment} = $AlignValues[1];
+    }
+    elsif (@AlignValues == 1) {
+      $OptionsInfo{RowHAlignment} = $AlignValues[0];
+    }
+    else {
+      die "Error: Invalid number of values, ", scalar(@AlignValues) , ", specified by \"-a --align\" option.\nIt must contain only one or two value.\n";
+    }
+    if ($OptionsInfo{RowHAlignment} !~ /^(left|center|right)$/i) {
+      die "Error: The horizontal alignment value specified, $Options{align}, for option \"-a --align\" is not valid. Allowed values: left, center, or right\n";
+    }
+    if ($OptionsInfo{RowVAlignment} !~ /^(top|middle|bottom)$/i) {
+      die "Error: The horizontal alignment value specified, $Options{align}, for option \"-a --align\" is not valid. Allowed values: top, middle, or bottom\n";
+    }
+  }
+
+  $OptionsInfo{TableHeaderRowHAlignment} = "center"; $OptionsInfo{TableHeaderRowVAlignment} = "middle";
+  if (exists($Options{headeralign})) {
+    my (@AlignValues) = split ",", $Options{headeralign};
+    if (@AlignValues == 2) {
+      $OptionsInfo{TableHeaderRowHAlignment} = $AlignValues[0];
+      $OptionsInfo{TableHeaderRowVAlignment} = $AlignValues[1];
+    }
+    elsif (@AlignValues == 1) {
+      $OptionsInfo{TableHeaderRowHAlignment} = $AlignValues[0];
+    }
+    else {
+      die "Error: Invalid number of values, ", scalar(@AlignValues) , ", specified by \"--headeralign\" option.\nIt must contain only one or two value.\n";
+    }
+    if ($OptionsInfo{TableHeaderRowHAlignment} !~ /^(left|center|right)$/i) {
+      die "Error: The horizontal alignment value specified, $Options{headeralign}, for option \"--headeralign\" is not valid. Allowed values: left, center, or right\n";
+    }
+    if ($OptionsInfo{TableHeaderRowVAlignment} !~ /^(top|middle|bottom)$/i) {
+      die "Error: The horizontal alignment value specified, $Options{headeralign}, for option \"-a --headeralign\" is not valid. Allowed values: top, middle, or bottom\n";
+    }
+  }
+
+  $OptionsInfo{TitleDisplay} = ($Options{titledisplay} =~ /^yes$/i) ? 1 : 0;
+
+  if (exists($Options{border})) {
+    $OptionsInfo{TableBorder} = $Options{border};
+  }
+  else {
+    $OptionsInfo{TableBorder} = ($Options{mode} =~ /^(plain|highlight)$/i) ? 1 : 0;
+  }
+  $OptionsInfo{TableCellPadding} = $Options{cellpadding};
+  $OptionsInfo{TableCellSpacing} = $Options{cellspacing};
+  $OptionsInfo{Footer} = $Options{footer} ? $Options{footer} : "";
+
+  if ($Options{headercolor}) {
+    $OptionsInfo{TableHeaderRowColor} = $Options{headercolor};
+  }
+  else {
+    $OptionsInfo{TableHeaderRowColor} = ($Options{mode} =~ /^plain$/i) ? "" : "#ccccff";
+  }
+
+  $OptionsInfo{NavLinksAtBottom} = 1; $OptionsInfo{NavLinksAtTop} = 0;
+  if ($Options{displaylinks} =~ /^(both|top)$/i) {
+    $OptionsInfo{NavLinksAtTop} = 1;
+  }
+  $OptionsInfo{NavLinksTableInfo} = 1; $OptionsInfo{NavLinksLineInfo} = 0;
+  if ($Options{displaylinksinfo} =~ /^both$/i) {
+    $OptionsInfo{NavLinksLineInfo} = 1;
+    $OptionsInfo{NavLinksTableInfo} = 1;
+  }
+  elsif ($Options{displaylinksinfo} =~ /^line$/i) {
+    $OptionsInfo{NavLinksLineInfo} = 1;
+    $OptionsInfo{NavLinksTableInfo} = 0;
+  }
+
+  if ($Options{stylesheet} =~ /^old$/i ) {
+    if (!$Options{stylesheetname}) {
+      die "Error: No stylesheet name specified using \"--stylesheetname\" option: It is required for \"old\" value of \"-s --stylesheet\" option. \n";
+    }
+  }
+
+  my(@ColorValues);
+  $OptionsInfo{OddRowsShadeColor} = ""; $OptionsInfo{EvenRowsShadeColor} = ""; $OptionsInfo{ShadeRowsStatus} = 0;
+  if ($Options{mode} =~ /^(shade|shadedhighlight)$/i) {
+    $OptionsInfo{OddRowsShadeColor} = "#ffffff";
+    $OptionsInfo{EvenRowsShadeColor} = "#e0e0eb";
+    $OptionsInfo{ShadeRowsStatus} = 1;
+    if ($Options{shadecolor}) {
+      # Make sure only two value are specified...
+      @ColorValues = split ",", $Options{shadecolor};
+      if (@ColorValues == 2) {
+	$OptionsInfo{OddRowsShadeColor} = $ColorValues[0];
+	$OptionsInfo{EvenRowsShadeColor} = $ColorValues[1];
+      }
+      else {
+	die "Error: Invalid number of values, ", scalar(@ColorValues) , ", specified by \"--shadecolor\" option.\nIt must contain only two values.\n";
+      }
+    }
+  }
+  $OptionsInfo{ValueOkColor} = ""; $OptionsInfo{ValueNotOkColor} = ""; $OptionsInfo{HighlightStatus} = 0;
+  if ($Options{mode} =~ /^(highlight|shadedhighlight)$/i) {
+    my($HighlightMode, $HighlightBy);
+    $HighlightMode = $Options{mode}; $HighlightBy = $Options{highlightby};
+
+    $OptionsInfo{HighlightStatus} = 1;
+    $OptionsInfo{ValueOkColor} = "#0fff0f";
+    $OptionsInfo{ValueNotOkColor} = "#ff0f0f";
+    if ($Options{highlightstyle} =~ /^text$/i) {
+      $OptionsInfo{ValueOkColor} = "#0fbb0f";
+      $OptionsInfo{ValueNotOkColor} = "#ff0f0f";
+    }
+    if ($Options{highlightcolor}) {
+      # Make sure two values are specified...
+      @ColorValues = split ",", $Options{highlightcolor};
+      if (@ColorValues == 2) {
+	$OptionsInfo{ValueOkColor} = $ColorValues[0];
+	$OptionsInfo{ValueNotOkColor} = $ColorValues[1];
+      }
+      else {
+	die "Error: Invalid number of values, ", scalar(@ColorValues), ", specified by \"--highlightcolor\" option.\nIt must contain only two value for $HighlightMode value specified using \"-m --mode\" option.\n";
+      }
+    }
+    if (!$Options{highlight}) {
+      die "Error: Specify columns to be highlighted using \"--hightlight\" option\n";
+    }
+    # Retrieve quartet values from "hightlight" option...
+    my(@HighlightValueQuartets);
+
+    @HighlightValueQuartets = ();
+    @HighlightValueQuartets = split ",", $Options{highlight};
+    if ((@HighlightValueQuartets % 4)) {
+      die "Error: Quartets not found in values specified using \"--highlight\" option for $HighlightMode \"-m --mode\"\n";
+    }
+    # Process quartets...
+    my($Index, $Col, $DataType, $Criterion, $Value);
+
+    @{$OptionsInfo{SpecifiedColIds}} = ();
+    @{$OptionsInfo{SpecifiedColDataTypes}} = ();
+    @{$OptionsInfo{SpecifiedColCriteria}} = ();
+    @{$OptionsInfo{SpecifiedColValues}} = ();
+    for ($Index = 0; $Index < @HighlightValueQuartets; $Index = $Index + 4) {
+      $Col = $HighlightValueQuartets[$Index];
+      $DataType = $HighlightValueQuartets[$Index + 1];
+      $Criterion = $HighlightValueQuartets[$Index + 2];
+      $Value = $HighlightValueQuartets[$Index + 3];
+      if ($Options{highlightby} =~ /^colnum$/i ) {
+	if (!IsPositiveInteger($Col)) {
+	  die "Error: Invalid column id, $Col, specified in quartet, \"$Col,$DataType,$Criterion,$Value\", using \"--hightlight\" option: It must be an integer value > 0 for $HighlightMode \"-m --mode\" and $HighlightBy \"--highlightby\" option values.\n";
+	}
+      }
+      if ($DataType !~ /^(numeric|text)$/i) {
+	die "Error: Invalid column data type, $DataType, specified in quartet, \"$Col,$DataType,$Criterion,$Value\", using \"--hightlight\" option: Valid values: numeric or text\n";
+      }
+      if ($Criterion !~ /^(eq|le|ge)$/i) {
+	die "Error: Invalid criterion value, $Criterion, specified in quartet, \"$Col,$DataType,$Criterion,$Value\", using \"--hightlight\" option: Valid values: le, ge, or eq\n";
+      }
+      if ($DataType =~ /^numeric$/i) {
+	if (!IsFloat($Value)) {
+	  die "Error: Invalid criterion value, $Value, specified in quartet, \"$Col,$DataType,$Criterion,$Value\", using \"--hightlight\" option: numeric value required for numeric data type\n";
+	}
+      }
+      push @{$OptionsInfo{SpecifiedColIds}}, $Col;
+      push @{$OptionsInfo{SpecifiedColDataTypes}}, $DataType;
+      push @{$OptionsInfo{SpecifiedColCriteria}}, $Criterion;
+      push @{$OptionsInfo{SpecifiedColValues}}, $Value;
+    }
+  }
+}
+
+# Retrieve information about input text files...
+sub RetrieveTextFilesInfo {
+  my($LineCount, $TextFile, $FileDir, $FileName, $HTMLFile, $CSSFile, $HTMLRoot, $HTMLTitle, $FileExt, $Index, $ColIndex, $ColNum, $ColLabel, $LinesCount, $InDelim, $Line, @LineWords, @ColLabels, $TopHTMLDir);
+
+  %TextFilesInfo = ();
+
+  @{$TextFilesInfo{FileOkay}} = ();
+  @{$TextFilesInfo{ColCount}} = ();
+  @{$TextFilesInfo{ColLabels}} = ();
+  @{$TextFilesInfo{ColLabelToNumMap}} = ();
+  @{$TextFilesInfo{LineCount}} = ();
+  @{$TextFilesInfo{InDelim}} = ();
+
+  @{$TextFilesInfo{HTMLRoot}} = ();
+  @{$TextFilesInfo{HTMLTitle}} = ();
+  @{$TextFilesInfo{MultipleHTMLTables}} = ();
+
+  @{$TextFilesInfo{TopHTMLDir}} = ();
+  @{$TextFilesInfo{SubHTMLDir}} = ();
+
+  FILELIST: for $Index (0 .. $#TextFilesList) {
+    $TextFile = $TextFilesList[$Index];
+
+    $TextFilesInfo{FileOkay}[$Index] = 0;
+    $TextFilesInfo{ColCount}[$Index] = 0;
+    $TextFilesInfo{LineCount}[$Index] = 0;
+    $TextFilesInfo{InDelim}[$Index] = "";
+    $TextFilesInfo{HTMLRoot}[$Index] = "";
+    $TextFilesInfo{HTMLTitle}[$Index] = "";
+    $TextFilesInfo{MultipleHTMLTables}[$Index] = 0;
+
+    @{$TextFilesInfo{ColLabels}[$Index]} = ();
+    %{$TextFilesInfo{ColLabelToNumMap}[$Index]} = ();
+
+    if (!(-e $TextFile)) {
+      warn "Warning: Ignoring file $TextFile: It doesn't exist\n";
+      next FILELIST;
+    }
+    if (!CheckFileType($TextFile, "csv tsv")) {
+      warn "Warning: Ignoring file $TextFile: It's not a csv or tsv file\n";
+      next FILELIST;
+    }
+    ($FileDir, $FileName, $FileExt) = ParseFileName($TextFile);
+    if ($FileExt =~ /^tsv$/i) {
+      $InDelim = "\t";
+    }
+    else {
+      $InDelim = "\,";
+      if ($Options{indelim} !~ /^(comma|semicolon)$/i) {
+	warn "Warning: Ignoring file $TextFile: The value specified, $Options{indelim}, for option \"--indelim\" is not valid for csv files\n";
+	next FILELIST;
+      }
+      if ($Options{indelim} =~ /^semicolon$/i) {
+	$InDelim = "\;";
+      }
+    }
+
+    if (!open TEXTFILE, "$TextFile") {
+      warn "Warning: Ignoring file $TextFile: Couldn't open it: $! \n";
+      next FILELIST;
+    }
+
+    $Line = GetTextLine(\*TEXTFILE);
+    @ColLabels = quotewords($InDelim, 0, $Line);
+    $LineCount = 0;
+    while (<TEXTFILE>) {
+      $LineCount++;
+    }
+    close TEXTFILE;
+
+    $FileDir = ""; $FileName = ""; $FileExt = "";
+    ($FileDir, $FileName, $FileExt) = ParseFileName($TextFile);
+    $HTMLRoot = $FileName;
+    if ($Options{root} && (@TextFilesList == 1)) {
+      my ($RootFileDir, $RootFileName, $RootFileExt) = ParseFileName($Options{root});
+      if ($RootFileName && $RootFileExt) {
+	$HTMLRoot = $RootFileName;
+      }
+      else {
+	$HTMLRoot = $Options{root};
+      }
+    }
+    $HTMLTitle = $HTMLRoot;
+    if ($Options{title} && (@TextFilesList == 1)) {
+      $HTMLTitle = $Options{title};
+    }
+    $HTMLFile = lc($HTMLRoot) . "-html";
+    if (!$Options{overwrite}) {
+      if (-d $HTMLFile) {
+	warn "Warning: Ignoring file $TextFile: The directory $HTMLFile already exists\n";
+	next FILELIST;
+      }
+    }
+
+    $TextFilesInfo{FileOkay}[$Index] = 1;
+    $TextFilesInfo{InDelim}[$Index] = $InDelim;
+    $TextFilesInfo{HTMLRoot}[$Index] = "$HTMLRoot";
+    $TextFilesInfo{HTMLTitle}[$Index] = "$HTMLTitle";
+
+    $TextFilesInfo{ColCount}[$Index] = @ColLabels;
+    push @{$TextFilesInfo{ColLabels}[$Index]}, @ColLabels;
+    for $ColNum (0 .. $#ColLabels) {
+      $ColLabel = $ColLabels[$ColNum];
+      $TextFilesInfo{ColLabelToNumMap}[$Index]{$ColLabel} = $ColNum;
+    }
+    $TextFilesInfo{LineCount}[$Index] = $LineCount;
+
+    if ($Options{numrows} == 0 || $LineCount <= $Options{numrows}) {
+      $TextFilesInfo{MultipleHTMLTables}[$Index] = 0;
+    }
+    else {
+      $TextFilesInfo{MultipleHTMLTables}[$Index] = 1;
+    }
+    # Setup HTML data directories paths...
+    $TopHTMLDir = lc($TextFilesInfo{HTMLRoot}[$Index]) . "-html";
+    $TextFilesInfo{TopHTMLDir}[$Index] = "$TopHTMLDir";
+    $TextFilesInfo{SubHTMLDir}[$Index] = "$TopHTMLDir\/html";
+  }
+}
+
+# Setup various data directories to hold HTML and other related files...
+sub SetupDataDirs {
+  my($Index) = @_;
+  my($TopHTMLDir, $SubHTMLDir, $CreateTopHTMLDir, $CreateSubHTMLDir);
+
+  $TopHTMLDir = $TextFilesInfo{TopHTMLDir}[$Index];
+  $SubHTMLDir = $TextFilesInfo{SubHTMLDir}[$Index];
+
+  # Clean up existing directories...
+  if (-d $TopHTMLDir) {
+    unlink "<$TopHTMLDir/*.html>";
+    unlink "<$TopHTMLDir/*.css>";
+  }
+  if (-d $SubHTMLDir) {
+    unlink "<$SubHTMLDir/*.html>";
+  }
+  # What directories need to be created...
+  $CreateTopHTMLDir = (-d $TopHTMLDir) ? 0 : 1;
+
+  $CreateSubHTMLDir = 0;
+  if ($TextFilesInfo{MultipleHTMLTables}[$Index]) {
+    $CreateSubHTMLDir = (-d $SubHTMLDir) ? 0 : 1;
+  }
+
+  # Create appropriate directories...
+  if ($CreateTopHTMLDir) {
+    mkdir $TopHTMLDir or die "Couldn't mkdir $TopHTMLDir: $! \n";
+  }
+  if ($CreateSubHTMLDir) {
+    mkdir $SubHTMLDir or die "Error: Couldn't mkdir $SubHTMLDir: $! \n";
+  }
+  else {
+    unlink <$SubHTMLDir/*.html>;
+  }
+  return ($TopHTMLDir, $SubHTMLDir);
+}
+
+# Setup script usage  and retrieve command line arguments specified using various options...
+sub SetupScriptUsage {
+
+  # Retrieve all the options...
+  %Options = ();
+  $Options{indelim} = "comma";
+  $Options{numrows} = 50;
+
+  $Options{mode} = "shade";
+  $Options{highlightby} = "colnum";
+  $Options{highlightstyle} = "background";
+
+  $Options{cellpadding} = 2;
+  $Options{cellspacing} = 1;
+
+  $Options{displaylinks} = "both";
+  $Options{displaylinksinfo} = "both";
+  $Options{stylesheet} = "new";
+
+  $Options{titledisplay} = "yes";
+
+  if (!GetOptions(\%Options, "align|a=s", "border|b=i", "cellpadding=i", "cellspacing=i", "color|c=s", "footer=s", "displaylinks|d=s", "displaylinksinfo=s", "help|h", "headeralign=s", "headercolor=s", "highlight=s", "highlightby=s", "highlightcolor=s", "highlightstyle=s", "indelim=s", "mode|m=s", "numrows|n=i", "overwrite|o", "root|r=s", "shadecolor=s", "stylesheet=s", "stylesheetname=s", "title|t=s", "titledisplay=s", "workingdir|w=s")) {
+    die "\nTo get a list of valid options and their values, use \"$ScriptName -h\" or\n\"perl -S $ScriptName -h\" command and try again...\n";
+  }
+
+  if ($Options{workingdir}) {
+    if (! -d $Options{workingdir}) {
+      die "Error: The value specified, $Options{workingdir}, for option \"-w --workingdir\" is not a directory name.\n";
+    }
+    chdir $Options{workingdir} or die "Error: Couldn't chdir $Options{workingdir}: $! \n";
+  }
+  if ($Options{displaylinks} !~ /^(top|bottom|both)$/i) {
+    die "Error: The value specified, $Options{displaylinks}, for option \"-d --displaylinks\" is not valid. Allowed values: top, bottom, or both\n";
+  }
+  if ($Options{displaylinksinfo} !~ /^(line|table|both)$/i) {
+    die "Error: The value specified, $Options{displaylinksinfo}, for option \"--displaylinksinfo\" is not valid. Allowed values: line, table, or both\n";
+  }
+  if ($Options{indelim} !~ /^(comma|semicolon)$/i) {
+    die "Error: The value specified, $Options{indelim}, for option \"--indelim\" is not valid. Allowed values: comma or semicolon\n";
+  }
+  if ($Options{highlightby} !~ /^(colnum|collabel)$/i) {
+    die "Error: The value specified, $Options{highlightby}, for option \"--highlightby\" is not valid. Allowed values: colnum or collabel\n";
+  }
+  if ($Options{highlightstyle} !~ /^(background|text)$/i) {
+    die "Error: The value specified, $Options{highlightstyle}, for option \"--highlightstyle\" is not valid. Allowed values: background or text\n";
+  }
+  if ($Options{mode} !~ /^(plain|shade|highlight|shadedhighlight)$/i) {
+    die "Error: The value specified, $Options{mode}, for option \"-m --mode\" is not valid. Allowed values: plain, shade, hightlight, or shadedhighlight\n";
+  }
+  if ($Options{stylesheet} !~ /^(old|new|none)$/i) {
+    die "Error: The value specified, $Options{stylesheet}, for option \"-s --stylesheet\" is not valid. Allowed values: old, new, or none\n";
+  }
+  if ($Options{numrows} < 0) {
+    die "Error: The value specified, $Options{numrows},  for option \"-n --numrows\" is not valid. Allowed values: >= 0 \n";
+  }
+  if ($Options{titledisplay} !~ /^(yes|no)$/i) {
+    die "Error: The value specified, $Options{titledisplay}, for option \"--titledisplay\" is not valid. Allowed values: yes or no\n";
+  }
+  if (exists($Options{border})) {
+    if ($Options{border} < 0) {
+      die "Error: The value specified, $Options{border},  for option \"--border\" is not valid. Allowed values: >= 0 \n";
+    }
+  }
+  if ($Options{cellpadding} < 0) {
+    die "Error: The value specified, $Options{cellpadding},  for option \"--cellpadding\" is not valid. Allowed values: >= 0 \n";
+  }
+  if ($Options{cellspacing} < 0) {
+    die "Error: The value specified, $Options{cellspacing},  for option \"--cellspacing\" is not valid. Allowed values: >= 0 \n";
+  }
+}
+
+__END__
+
+=head1 NAME
+
+TextFilesToHTML.pl - Generate HTML table file(s) from TextFile(s)
+
+=head1 SYNOPSIS
+
+TextFilesToHTML.pl ... TextFile(s)...
+
+TextFilesToHTML.pl [B<-a, --align> left | center | right,[top | middle | bottom]] [B<-b, --border> borderwidth] [B<--cellpadding> padding]
+[B<--cellspacing> spacing] [B<--footer> string] [B<-d, --displaylinks> top | bottom | both]
+[B<--displaylinksinfo> line | table | both] [B<-h, --help>]
+[B<--headeralign> left | center | right,[top | middle | bottom]] [B<--headercolor> "#RRGGBB"]
+[B<--highlight> "fieldlabel,datatype,criterion,value,[fieldlabel,datatype,criterion,value,]..."]
+[B<--highlightby> colnum | collabel] [B<--highlightcolor> "#RRGGBB,#RRGGBB"]
+[B<--highlightstyle> text | background] [B<--indelim> comma | semicolon] [B<-m, --mode> plain | shade | highlight | shadedhighlight]
+[B<-n, --numrows> number] [B<-o, --overwrite>] [B<-r, --root> rootname]
+[B<--stylesheet> old | new | none] [B<--stylesheetname> filename] [B< --shadecolor> "#RRGGBB,#RRGGBB"]
+[B<-t, --title> string] [B<--titledisplay> yes | no] [B<-w, --workingdir> dirname] TextFile(s)...
+
+=head1 DESCRIPTION
+
+Generate HTML file(s) from I<TextFile(s)>. The HTML file(s) contain data tables and appropriate
+navigational links to view other tables. These files can be generated for local viewing or
+deployment on a web server. A variety of options are provided to control style and
+appearence of tables.
+
+Multiple I<TextFile(s)> names are separated by spaces. The valid file extensions are I<.csv> and
+I<.tsv> for comma/semicolon and tab delimited text files respectively. All other file names
+are ignored. All the text files in a current directory can be specified by I<*.csv>,
+I<*.tsv>, or the current directory name. The B<--indelim> option determines the
+format of I<TextFile(s)>. Any file which doesn't correspond to the format indicated
+by B<--indelim> option is ignored.
+
+=head1 OPTIONS
+
+=over 4
+
+=item B<-a, --align> I<left | center | right,[top | middle | bottom]>
+
+Horizontal and vertical alignment for table rows except for header row which is specified
+using B<--headeralign> option. Possible horizontal alignment values: I<left, center, or right>.
+Possible vertical alignment values: I<top, middle, or bottom>.
+
+Default values: I<left,middle>
+
+=item B<-b, --border> I<borderwidth>
+
+Table border width. Default value: 1 for I<plain> and I<highlight> mode; 0 for I<shade>
+and I<shadedhightlight> mode. Zero indicates no border.
+
+=item B<--cellpadding> I<padding>
+
+Table cell padding. Default value: I<2>.
+
+=item B<--cellspacing> I<spacing>
+
+Table cell spacing. Default value: I<1>.
+
+=item B<--footer> I<string>
+
+Text string to be included at bottom of each HTML file. Default: none.
+
+=item B<-d, --displaylinks> I<top | bottom | both>
+
+Specify where to display navigation links in each HTML file for accessing all other HTML
+files. Possible values: I<top, bottom, or both>. Default value: I<both>. This option is
+only valid during multiple HTML files generation for an input file.
+
+=item B<--displaylinksinfo> I<line | table | both>
+
+Control display of additional information along with navigational links: Showing line
+n of m is displyed for line and showing table n of m for table. Possible values: I<line
+| table | both>. Default: I<both>. This option is only valid  during multiple HTML files generation.
+
+=item B<-h, --help>
+
+Print this help message
+
+=item B<--headeralign> I<left | center | right,[top | middle | bottom]>
+
+Horizontal and vertical alignment for table header rows. Possible horizontal alignment
+values: I<left, center, or right>. Possible vertical alignment values: I<top, middle, or bottom>.
+
+Default values: I<center,middle>
+
+=item B<--headercolor> I<"#RRGGBB">
+
+Color used to fill background of table header row containing column labels
+represented as a hexadecimal string. None for B<-m, --mode> option value
+of I<plain> and I<#ccccff>, light blue, for others.
+
+=item B<--highlight> I<"fieldlabel,datatype,criterion,value,[fieldlabel,datatype,criterion,value,]...">
+
+This value is mode specific. It specifies how to highlight various column values
+for each text file. Same set of quartets values are applied to all I<TextFile(s)>.
+
+For I<highlightbycolnum> mode, input text format contains these quartets:
+I<colnum,datatype,criterion,value,...>. Possible datatype values: I<numeric or text>.
+Possible criterion values: I<le, ge, or eq>. Examples: "1,numeric,le,450>" or
+"2,numeric,ge,150,6,numeric,le,10".
+
+For I<highlightbycollabel> mode, input text format contains these quartets:
+I<collabel,datatype,criterion,value,...>.
+
+=item B<--highlightby> I<colnum | collabel>
+
+This value is mode specific. It indicates how columns to be highlighted are specified
+using B<--hightlight> option. Possible values: I<colnum or collabel>. Default value: I<colnum>.
+
+=item B<--highlightcolor> I<"#RRGGBB,#RRGGBB">
+
+Colors used to highlight column values during I<highlight> and I<shadedhightlight>
+mode represented as hexadecimal strings.
+
+For B<--highlighstyle> option values of I<text> and I<background>, these colors represent
+text or background colors respectively. For a specific column, first color string is used for
+values which meet criterion indicated by B<--highlight> option; the second color is used
+for rest of the values.
+
+Default values for I<background> B<--highlightstyle>: I<#0fff0f,#ff0f0f>. And default values for
+I<text> B<--highlightstyle>: I<#0fbb0f,#ff0f0f>. Hexadecimal strings for both B<--highlightstyle>
+colors correspond to I<reddish> and I<greenish>.
+
+=item B<--highlightstyle> I<text | background>
+
+This value is mode specific. It indicates highlight style used to differentiate column
+values which pass a specified criterion from others. Possible values: I<text or
+background>. Default: I<background>.
+
+=item B<--indelim> I<comma | semicolon>
+
+Input delimiter for CSV I<TextFile(s)>. Possible values: I<comma or semicolon>.
+Default value: I<comma>. For TSV files, this option is ignored and I<tab> is used as a
+delimiter.
+
+=item B<-m, --mode> I<plain | shade | highlight | shadedhighlight>
+
+Specify how to generate HTML table(s): plain tables with line borders, background of
+alternate rows filled with a specified color, column values hightlighted using a specified
+criteria, or combination of previous two styles.
+
+Possible values: I<plain, shade, highlight, or shadedhighlight>. Default: I<shade>.
+
+=item B<-n, --numrows> I<number>
+
+Maximum number of rows per table. Default value: I<100>. Use 0 to put all rows into
+one table. For I<TextFile(s)> with more than maximum number of specified rows,
+multiple HTML tables, with appropriate navigation links, are created.
+
+=item B<-o, --overwrite>
+
+Overwrite existing files.
+
+=item B<-r, --root> I<rootname>
+
+New file or directory name is generated using the root: <root>.html or <root>-html.
+Default new file name: <InitialTextFileName>.html. Default directory name:
+<InitialTextFileName>-html.
+
+For I<TextFile(s)> with more than maximum number of rows specified per table,
+this directory tree is generated using <Name> where <Name> corresponds to <root>
+or <InitialTextFileName>:Top dir - <Name>-html; Sub dirs - html and mols. <Top dir> contains
+<Name>.html and <Name>.css files and <sub dir> html conatins various
+<Name>Lines<Start>To<End>.html files; <sub dir> mols is created as needed and contains
+
+This option is ignored for multiple input files.
+
+=item B<--stylesheet> I<old | new | none>
+
+Controls usage of stylesheet for newly generated HTML file(s). Possible values: I<old,
+new, or none>. Default value: I<new>.
+
+Stylesheet file contains various properties which control apperance of HTML pages:
+type, size, and color of fonts; background color; and so on.
+
+For I<old> value, an existing stylesheet file specified by B<--stylesheetname> option is
+used for each HTML file; no new stylesheet file is created. This option is quite handy
+for deploying HTML file(s) on a web server: assuming you specify a valid stylesheet
+file location relative to your WWWRoot, a reference to this stylesheet is added to each
+HTML file. For local deployment of HTML file(s), a complete path to a local stylesheet
+is fine as well.
+
+For I<create> value, a new stylesheet is created and reference to this local stylesheet
+is added to each HTML file. Use option B<--stylesheetname> to specify name.
+
+For I<none> value, stylesheet usage is completely ignored.
+
+=item B<--stylesheetname> I<filename>
+
+Stylesheet file name to be used in conjunction with B<-s --stylesheet> option. It is only
+valid for I<old> value of B<-s --stylesheet> option. Specify a valid stylesheet file location
+relative to your WWWRoot and a reference to this stylesheet is added to each HTML
+file. Example: "/stylesheets/MyStyleSheet.css". Or a complete path name to a local
+stylesheet file.
+
+For I<create> value of B<-s --stylesheet> option, a new stylesheet file is created using
+B<-r --root> option. And value of B<--stylesheetname> is simply ignored.
+
+=item B< --shadecolor> I<"#RRGGBB,#RRGGBB">
+
+Colors used to fill background of rows during I<shade> and I<shadedhightlight> mode
+represented as a pair of hexadecimal string; the first and second color values
+are used for odd and even number rows respectively.
+
+Default value: I<"#ffffff,#e0e9eb"> - it's white and very light blue for odd and even number rows.
+
+=item B<-t, --title> I<string>
+
+Title for HTML table(s). Default value: <TextFileName>. For multiple input files,
+B<-r --root> option is used to generate appropriate titles.
+
+=item B<--titledisplay> I<yes | no>
+
+Display title for HTML table(s). Possible values: I<yes or no>. Default value: I<yes>.
+
+=item B<-w, --workingdir> I<dirname>
+
+Location of working directory. Default: current directory.
+
+=back
+
+=head1 EXAMPLES
+
+To generate HTML tables with rows background filled with white and greyish colors and
+navigation links on top and botton of each page, type:
+
+    % TextFilesToHTML.pl -o Sample1.csv
+
+To generate HTML tables with rows background filled with golden and greyish colors,
+navigation links on top and botton of each page, 10 rows in each table, greyish header
+row color, and cell spacing of 1, type:
+
+    % TextFilesToHTML.pl -o -n 10 --headeralign "center" --headercolor
+      "#a1a1a1" --shadecolor "#ddd700,#d1d1d1" --cellspacing 1
+      Sample1.csv
+
+To generate plain HTML tables with 10 rows in each table and navigation links only at
+the bottom, type:
+
+    % TextFilesToHTML.pl -o -n 10 --displaylinks bottom -m plain
+      Sample1.csv
+
+To highlight values in column 3 using specified highlight criteria and fill in default background
+colors, type:
+
+    % TextFilesToHTML.pl -n 10 --highlight "3,numeric,le,450"
+      --highlightby colnum --highlightstyle background -m
+      shadedhighlight -o Sample1.csv
+
+To highlight values in column MolWeight using specified highlight criteria, color the text using
+default colors, and add a footer message in every page, type:
+
+    % TextFilesToHTML.pl -n 4 --highlight "MolWeight,numeric,le,500"
+      --highlightby collabel --highlightstyle text -m shadedhighlight -o
+      --footer "Copyright (C) MayaChemTools" --cellspacing 1 Sample1.csv
+
+=head1 AUTHOR
+
+Manish Sud <[e-mail]>
+
+=head1 SEE ALSO
+
+JoinTextFiles.pl, MergeTextFilesWithSD.pl, ModifyTextFilesFormat.pl, SplitTextFiles.pl, SortTextFiles.pl
+
+=head1 COPYRIGHT
+
+Copyright (C) 2015 Manish Sud. All rights reserved.
+
+This file is part of MayaChemTools.
+
+MayaChemTools is free software; you can redistribute it and/or modify it under
+the terms of the GNU Lesser General Public License as published by the Free
+Software Foundation; either version 3 of the License, or (at your option)
+any later version.
+
+=cut