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comparison docs/modules/txt/FingerprintsStringUtil.txt @ 0:4816e4a8ae95 draft default tip
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author | deepakjadmin |
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date | Wed, 20 Jan 2016 09:23:18 -0500 |
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1 NAME | |
2 FingerprintsStringUtil | |
3 | |
4 SYNOPSIS | |
5 use Fingerprints::FingerprintsStringUtil; | |
6 | |
7 use Fingerprints::FingerprintsStringUtil qw(:all); | |
8 | |
9 DESCRIPTION | |
10 FingerprintsStringUtil module provides the following functions: | |
11 | |
12 AreFingerprintsStringValuesValid, GenerateFingerprintsBitVectorString, | |
13 GenerateFingerprintsString, GenerateFingerprintsVectorString, | |
14 GetDefaultBitStringFormat, GetDefaultBitsOrder, | |
15 GetDefaultVectorStringFormat, GetFingeprintsStringDelimiter, | |
16 GetFingerprintsStringTypeAndDescription, GetFingerprintsStringValues, | |
17 ParseFingerprintsBitVectorString, ParseFingerprintsString, | |
18 ParseFingerprintsVectorString | |
19 | |
20 The current release of MayaChemTools supports the following types of | |
21 fingerprint bit-vector and vector strings: | |
22 | |
23 FingerprintsVector;AtomNeighborhoods:AtomicInvariantsAtomTypes:MinRadi | |
24 us0:MaxRadius2;41;AlphaNumericalValues;ValuesString;NR0-C.X1.BO1.H3-AT | |
25 C1:NR1-C.X3.BO3.H1-ATC1:NR2-C.X1.BO1.H3-ATC1:NR2-C.X3.BO4-ATC1 NR0-C.X | |
26 1.BO1.H3-ATC1:NR1-C.X3.BO3.H1-ATC1:NR2-C.X1.BO1.H3-ATC1:NR2-C.X3.BO4-A | |
27 TC1 NR0-C.X2.BO2.H2-ATC1:NR1-C.X2.BO2.H2-ATC1:NR1-C.X3.BO3.H1-ATC1:NR2 | |
28 -C.X2.BO2.H2-ATC1:NR2-N.X3.BO3-ATC1:NR2-O.X1.BO1.H1-ATC1 NR0-C.X2.B... | |
29 | |
30 FingerprintsVector;AtomTypesCount:AtomicInvariantsAtomTypes:ArbitraryS | |
31 ize;10;NumericalValues;IDsAndValuesString;C.X1.BO1.H3 C.X2.BO2.H2 C.X2 | |
32 .BO3.H1 C.X3.BO3.H1 C.X3.BO4 F.X1.BO1 N.X2.BO2.H1 N.X3.BO3 O.X1.BO1.H1 | |
33 O.X1.BO2;2 4 14 3 10 1 1 1 3 2 | |
34 | |
35 FingerprintsVector;AtomTypesCount:SLogPAtomTypes:ArbitrarySize;16;Nume | |
36 ricalValues;IDsAndValuesString;C1 C10 C11 C14 C18 C20 C21 C22 C5 CS F | |
37 N11 N4 O10 O2 O9;5 1 1 1 14 4 2 1 2 2 1 1 1 1 3 1 | |
38 | |
39 FingerprintsVector;AtomTypesCount:SLogPAtomTypes:FixedSize;67;OrderedN | |
40 umericalValues;IDsAndValuesString;C1 C2 C3 C4 C5 C6 C7 C8 C9 C10 C11 C | |
41 12 C13 C14 C15 C16 C17 C18 C19 C20 C21 C22 C23 C24 C25 C26 C27 CS N1 N | |
42 2 N3 N4 N5 N6 N7 N8 N9 N10 N11 N12 N13 N14 NS O1 O2 O3 O4 O5 O6 O7 O8 | |
43 O9 O10 O11 O12 OS F Cl Br I Hal P S1 S2 S3 Me1 Me2;5 0 0 0 2 0 0 0 0 1 | |
44 1 0 0 1 0 0 0 14 0 4 2 1 0 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0... | |
45 | |
46 FingerprintsVector;EStateIndicies:ArbitrarySize;11;NumericalValues;IDs | |
47 AndValuesString;SaaCH SaasC SaasN SdO SdssC SsCH3 SsF SsOH SssCH2 SssN | |
48 H SsssCH;24.778 4.387 1.993 25.023 -1.435 3.975 14.006 29.759 -0.073 3 | |
49 .024 -2.270 | |
50 | |
51 FingerprintsVector;EStateIndicies:FixedSize;87;OrderedNumericalValues; | |
52 ValuesString;0 0 0 0 0 0 0 3.975 0 -0.073 0 0 24.778 -2.270 0 0 -1.435 | |
53 4.387 0 0 0 0 0 0 3.024 0 0 0 0 0 0 0 1.993 0 29.759 25.023 0 0 0 0 1 | |
54 4.006 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
55 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
56 | |
57 FingerprintsVector;ExtendedConnectivity:AtomicInvariantsAtomTypes:Radi | |
58 us2;60;AlphaNumericalValues;ValuesString;73555770 333564680 352413391 | |
59 666191900 1001270906 1371674323 1481469939 1977749791 2006158649 21414 | |
60 08799 49532520 64643108 79385615 96062769 273726379 564565671 85514103 | |
61 5 906706094 988546669 1018231313 1032696425 1197507444 1331250018 1338 | |
62 532734 1455473691 1607485225 1609687129 1631614296 1670251330 17303... | |
63 | |
64 FingerprintsVector;ExtendedConnectivityCount:AtomicInvariantsAtomTypes | |
65 :Radius2;60;NumericalValues;IDsAndValuesString;73555770 333564680 3524 | |
66 13391 666191900 1001270906 1371674323 1481469939 1977749791 2006158649 | |
67 2141408799 49532520 64643108 79385615 96062769 273726379 564565671...; | |
68 3 2 1 1 14 1 2 10 4 3 1 1 1 1 2 1 2 1 1 1 2 3 1 1 2 1 3 3 8 2 2 2 6 2 | |
69 1 2 1 1 2 1 1 1 2 1 1 2 1 2 1 1 1 1 1 1 1 1 1 2 1 1 | |
70 | |
71 FingerprintsBitVector;ExtendedConnectivityBits:AtomicInvariantsAtomTyp | |
72 es:Radius2;1024;BinaryString;Ascending;0000000000000000000000000000100 | |
73 0000000001010000000110000011000000000000100000000000000000000000100001 | |
74 1000000110000000000000000000000000010011000000000000000000000000010000 | |
75 0000000000000000000000000010000000000000000001000000000000000000000000 | |
76 0000000000010000100001000000000000101000000000000000100000000000000... | |
77 | |
78 FingerprintsVector;ExtendedConnectivity:FunctionalClassAtomTypes:Radiu | |
79 s2;57;AlphaNumericalValues;ValuesString;24769214 508787397 850393286 8 | |
80 62102353 981185303 1231636850 1649386610 1941540674 263599683 32920567 | |
81 1 571109041 639579325 683993318 723853089 810600886 885767127 90326012 | |
82 7 958841485 981022393 1126908698 1152248391 1317567065 1421489994 1455 | |
83 632544 1557272891 1826413669 1983319256 2015750777 2029559552 20404... | |
84 | |
85 FingerprintsVector;ExtendedConnectivity:EStateAtomTypes:Radius2;62;Alp | |
86 haNumericalValues;ValuesString;25189973 528584866 662581668 671034184 | |
87 926543080 1347067490 1738510057 1759600920 2034425745 2097234755 21450 | |
88 44754 96779665 180364292 341712110 345278822 386540408 387387308 50430 | |
89 1706 617094135 771528807 957666640 997798220 1158349170 1291258082 134 | |
90 1138533 1395329837 1420277211 1479584608 1486476397 1487556246 1566... | |
91 | |
92 FingerprintsBitVector;MACCSKeyBits;166;BinaryString;Ascending;00000000 | |
93 0000000000000000000000000000000001001000010010000000010010000000011100 | |
94 0100101010111100011011000100110110000011011110100110111111111111011111 | |
95 11111111111110111000 | |
96 | |
97 FingerprintsBitVector;MACCSKeyBits;322;BinaryString;Ascending;11101011 | |
98 1110011111100101111111000111101100110000000000000011100010000000000000 | |
99 0000000000000000000000000000000000000000000000101000000000000000000000 | |
100 0000000000000000000000000000000000000000000000000000000000000000000000 | |
101 0000000000000000000000000000000000000011000000000000000000000000000000 | |
102 0000000000000000000000000000000000000000 | |
103 | |
104 FingerprintsVector;MACCSKeyCount;166;OrderedNumericalValues;ValuesStri | |
105 ng;0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
106 0 0 0 0 0 0 0 1 0 0 3 0 0 0 0 4 0 0 2 0 0 0 0 0 0 0 0 2 0 0 2 0 0 0 0 | |
107 0 0 0 0 1 1 8 0 0 0 1 0 0 1 0 1 0 1 0 3 1 3 1 0 0 0 1 2 0 11 1 0 0 0 | |
108 5 0 0 1 2 0 1 1 0 0 0 0 0 1 1 0 1 1 1 1 0 4 0 0 1 1 0 4 6 1 1 1 2 1 1 | |
109 3 5 2 2 0 5 3 5 1 1 2 5 1 2 1 2 4 8 3 5 5 2 2 0 3 5 4 1 | |
110 | |
111 FingerprintsVector;MACCSKeyCount;322;OrderedNumericalValues;ValuesStri | |
112 ng;14 8 2 0 2 0 4 4 2 1 4 0 0 2 5 10 5 2 1 0 0 2 0 5 13 3 28 5 5 3 0 0 | |
113 0 4 2 1 1 0 1 1 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 5 3 0 0 0 1 0 | |
114 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 | |
115 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 2 0 0 0 0 0 0 0 0 0 | |
116 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ... | |
117 | |
118 FingerprintsBitVector;PathLengthBits:AtomicInvariantsAtomTypes:MinLeng | |
119 th1:MaxLength8;1024;BinaryString;Ascending;001000010011010101011000110 | |
120 0100010101011000101001011100110001000010001001101000001001001001001000 | |
121 0010110100000111001001000001001010100100100000000011000000101001011100 | |
122 0010000001000101010100000100111100110111011011011000000010110111001101 | |
123 0101100011000000010001000011000010100011101100001000001000100000000... | |
124 | |
125 FingerprintsVector;PathLengthCount:AtomicInvariantsAtomTypes:MinLength | |
126 1:MaxLength8;432;NumericalValues;IDsAndValuesPairsString;C.X1.BO1.H3 2 | |
127 C.X2.BO2.H2 4 C.X2.BO3.H1 14 C.X3.BO3.H1 3 C.X3.BO4 10 F.X1.BO1 1 N.X | |
128 2.BO2.H1 1 N.X3.BO3 1 O.X1.BO1.H1 3 O.X1.BO2 2 C.X1.BO1.H3C.X3.BO3.H1 | |
129 2 C.X2.BO2.H2C.X2.BO2.H2 1 C.X2.BO2.H2C.X3.BO3.H1 4 C.X2.BO2.H2C.X3.BO | |
130 4 1 C.X2.BO2.H2N.X3.BO3 1 C.X2.BO3.H1:C.X2.BO3.H1 10 C.X2.BO3.H1:C.... | |
131 | |
132 FingerprintsVector;PathLengthCount:MMFF94AtomTypes:MinLength1:MaxLengt | |
133 h8;463;NumericalValues;IDsAndValuesPairsString;C5A 2 C5B 2 C=ON 1 CB 1 | |
134 8 COO 1 CR 9 F 1 N5 1 NC=O 1 O=CN 1 O=CO 1 OC=O 1 OR 2 C5A:C5B 2 C5A:N | |
135 5 2 C5ACB 1 C5ACR 1 C5B:C5B 1 C5BC=ON 1 C5BCB 1 C=ON=O=CN 1 C=ONNC=O 1 | |
136 CB:CB 18 CBF 1 CBNC=O 1 COO=O=CO 1 COOCR 1 COOOC=O 1 CRCR 7 CRN5 1 CR | |
137 OR 2 C5A:C5B:C5B 2 C5A:C5BC=ON 1 C5A:C5BCB 1 C5A:N5:C5A 1 C5A:N5CR ... | |
138 | |
139 FingerprintsVector;TopologicalAtomPairs:AtomicInvariantsAtomTypes:MinD | |
140 istance1:MaxDistance10;223;NumericalValues;IDsAndValuesString;C.X1.BO1 | |
141 .H3-D1-C.X3.BO3.H1 C.X2.BO2.H2-D1-C.X2.BO2.H2 C.X2.BO2.H2-D1-C.X3.BO3. | |
142 H1 C.X2.BO2.H2-D1-C.X3.BO4 C.X2.BO2.H2-D1-N.X3.BO3 C.X2.BO3.H1-D1-...; | |
143 2 1 4 1 1 10 8 1 2 6 1 2 2 1 2 1 2 2 1 2 1 5 1 10 12 2 2 1 2 1 9 1 3 1 | |
144 1 1 2 2 1 3 6 1 6 14 2 2 2 3 1 3 1 8 2 2 1 3 2 6 1 2 2 5 1 3 1 23 1... | |
145 | |
146 FingerprintsVector;TopologicalAtomPairs:FunctionalClassAtomTypes:MinDi | |
147 stance1:MaxDistance10;144;NumericalValues;IDsAndValuesString;Ar-D1-Ar | |
148 Ar-D1-Ar.HBA Ar-D1-HBD Ar-D1-Hal Ar-D1-None Ar.HBA-D1-None HBA-D1-NI H | |
149 BA-D1-None HBA.HBD-D1-NI HBA.HBD-D1-None HBD-D1-None NI-D1-None No...; | |
150 23 2 1 1 2 1 1 1 1 2 1 1 7 28 3 1 3 2 8 2 1 1 1 5 1 5 24 3 3 4 2 13 4 | |
151 1 1 4 1 5 22 4 4 3 1 19 1 1 1 1 1 2 2 3 1 1 8 25 4 5 2 3 1 26 1 4 1 ... | |
152 | |
153 FingerprintsVector;TopologicalAtomTorsions:AtomicInvariantsAtomTypes;3 | |
154 3;NumericalValues;IDsAndValuesString;C.X1.BO1.H3-C.X3.BO3.H1-C.X3.BO4- | |
155 C.X3.BO4 C.X1.BO1.H3-C.X3.BO3.H1-C.X3.BO4-N.X3.BO3 C.X2.BO2.H2-C.X2.BO | |
156 2.H2-C.X3.BO3.H1-C.X2.BO2.H2 C.X2.BO2.H2-C.X2.BO2.H2-C.X3.BO3.H1-O...; | |
157 2 2 1 1 2 2 1 1 3 4 4 8 4 2 2 6 2 2 1 2 1 1 2 1 1 2 6 2 4 2 1 3 1 | |
158 | |
159 FingerprintsVector;TopologicalAtomTorsions:EStateAtomTypes;36;Numerica | |
160 lValues;IDsAndValuesString;aaCH-aaCH-aaCH-aaCH aaCH-aaCH-aaCH-aasC aaC | |
161 H-aaCH-aasC-aaCH aaCH-aaCH-aasC-aasC aaCH-aaCH-aasC-sF aaCH-aaCH-aasC- | |
162 ssNH aaCH-aasC-aasC-aasC aaCH-aasC-aasC-aasN aaCH-aasC-ssNH-dssC a...; | |
163 4 4 8 4 2 2 6 2 2 2 4 3 2 1 3 3 2 2 2 1 2 1 1 1 2 1 1 1 1 1 1 1 2 1 1 2 | |
164 | |
165 FingerprintsVector;TopologicalAtomTriplets:AtomicInvariantsAtomTypes:M | |
166 inDistance1:MaxDistance10;3096;NumericalValues;IDsAndValuesString;C.X1 | |
167 .BO1.H3-D1-C.X1.BO1.H3-D1-C.X3.BO3.H1-D2 C.X1.BO1.H3-D1-C.X2.BO2.H2-D1 | |
168 0-C.X3.BO4-D9 C.X1.BO1.H3-D1-C.X2.BO2.H2-D3-N.X3.BO3-D4 C.X1.BO1.H3-D1 | |
169 -C.X2.BO2.H2-D4-C.X2.BO2.H2-D5 C.X1.BO1.H3-D1-C.X2.BO2.H2-D6-C.X3....; | |
170 1 2 2 2 2 2 2 2 8 8 4 8 4 4 2 2 2 2 4 2 2 2 4 2 2 2 2 1 2 2 4 4 4 2 2 | |
171 2 4 4 4 8 4 4 2 4 4 4 2 4 4 2 2 2 2 2 2 2 2 1 2 2 2 2 2 2 2 2 2 2 8... | |
172 | |
173 FingerprintsVector;TopologicalAtomTriplets:SYBYLAtomTypes:MinDistance1 | |
174 :MaxDistance10;2332;NumericalValues;IDsAndValuesString;C.2-D1-C.2-D9-C | |
175 .3-D10 C.2-D1-C.2-D9-C.ar-D10 C.2-D1-C.3-D1-C.3-D2 C.2-D1-C.3-D10-C.3- | |
176 D9 C.2-D1-C.3-D2-C.3-D3 C.2-D1-C.3-D2-C.ar-D3 C.2-D1-C.3-D3-C.3-D4 C.2 | |
177 -D1-C.3-D3-N.ar-D4 C.2-D1-C.3-D3-O.3-D2 C.2-D1-C.3-D4-C.3-D5 C.2-D1-C. | |
178 3-D5-C.3-D6 C.2-D1-C.3-D5-O.3-D4 C.2-D1-C.3-D6-C.3-D7 C.2-D1-C.3-D7... | |
179 | |
180 FingerprintsVector;TopologicalPharmacophoreAtomPairs:ArbitrarySize:Min | |
181 Distance1:MaxDistance10;54;NumericalValues;IDsAndValuesString;H-D1-H H | |
182 -D1-NI HBA-D1-NI HBD-D1-NI H-D2-H H-D2-HBA H-D2-HBD HBA-D2-HBA HBA-D2- | |
183 HBD H-D3-H H-D3-HBA H-D3-HBD H-D3-NI HBA-D3-NI HBD-D3-NI H-D4-H H-D4-H | |
184 BA H-D4-HBD HBA-D4-HBA HBA-D4-HBD HBD-D4-HBD H-D5-H H-D5-HBA H-D5-...; | |
185 18 1 2 1 22 12 8 1 2 18 6 3 1 1 1 22 13 6 5 7 2 28 9 5 1 1 1 36 16 10 | |
186 3 4 1 37 10 8 1 35 10 9 3 3 1 28 7 7 4 18 16 12 5 1 2 1 | |
187 | |
188 FingerprintsVector;TopologicalPharmacophoreAtomPairs:FixedSize:MinDist | |
189 ance1:MaxDistance10;150;OrderedNumericalValues;ValuesString;18 0 0 1 0 | |
190 0 0 2 0 0 1 0 0 0 0 22 12 8 0 0 1 2 0 0 0 0 0 0 0 0 18 6 3 1 0 0 0 1 | |
191 0 0 1 0 0 0 0 22 13 6 0 0 5 7 0 0 2 0 0 0 0 0 28 9 5 1 0 0 0 1 0 0 1 0 | |
192 0 0 0 36 16 10 0 0 3 4 0 0 1 0 0 0 0 0 37 10 8 0 0 0 0 1 0 0 0 0 0 0 | |
193 0 35 10 9 0 0 3 3 0 0 1 0 0 0 0 0 28 7 7 4 0 0 0 0 0 0 0 0 0 0 0 18... | |
194 | |
195 FingerprintsVector;TopologicalPharmacophoreAtomTriplets:ArbitrarySize: | |
196 MinDistance1:MaxDistance10;696;NumericalValues;IDsAndValuesString;Ar1- | |
197 Ar1-Ar1 Ar1-Ar1-H1 Ar1-Ar1-HBA1 Ar1-Ar1-HBD1 Ar1-H1-H1 Ar1-H1-HBA1 Ar1 | |
198 -H1-HBD1 Ar1-HBA1-HBD1 H1-H1-H1 H1-H1-HBA1 H1-H1-HBD1 H1-HBA1-HBA1 H1- | |
199 HBA1-HBD1 H1-HBA1-NI1 H1-HBD1-NI1 HBA1-HBA1-NI1 HBA1-HBD1-NI1 Ar1-...; | |
200 46 106 8 3 83 11 4 1 21 5 3 1 2 2 1 1 1 100 101 18 11 145 132 26 14 23 | |
201 28 3 3 5 4 61 45 10 4 16 20 7 5 1 3 4 5 3 1 1 1 1 5 4 2 1 2 2 2 1 1 1 | |
202 119 123 24 15 185 202 41 25 22 17 3 5 85 95 18 11 23 17 3 1 1 6 4 ... | |
203 | |
204 FingerprintsVector;TopologicalPharmacophoreAtomTriplets:FixedSize:MinD | |
205 istance1:MaxDistance10;2692;OrderedNumericalValues;ValuesString;46 106 | |
206 8 3 0 0 83 11 4 0 0 0 1 0 0 0 0 0 0 0 0 21 5 3 0 0 1 2 2 0 0 1 0 0 0 | |
207 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 101 18 11 0 0 145 132 26 | |
208 14 0 0 23 28 3 3 0 0 5 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61 45 10 4 0 | |
209 0 16 20 7 5 1 0 3 4 5 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 5 ... | |
210 | |
211 FUNCTIONS | |
212 AreFingerprintsStringValuesValid | |
213 $Status = AreFingerprintsStringValuesValid($FPString); | |
214 | |
215 Returns 0 or 1 based on whether *FingerprintsString* contains valid | |
216 values. | |
217 | |
218 GetDefaultBitStringFormat | |
219 $BitStringFormat = GetDefaultBitStringFormat(); | |
220 | |
221 Returns default BitStringFormat for fingerprints bit-vector strings. | |
222 | |
223 GetDefaultBitsOrder | |
224 $BitsOrder = GetDefaultBitsOrder(); | |
225 | |
226 Returns default BitsOrder for fingerprints bit-vector fingerprints. | |
227 | |
228 GetDefaultVectorStringFormat | |
229 $StringFormat = GetDefaultVectorStringFormat(); | |
230 | |
231 Returns default VectorStringFormat for fingerprints vector strings. | |
232 | |
233 GetFingeprintsStringDelimiter | |
234 $Delimiter = GetFingeprintsStringDelimiter(); | |
235 | |
236 Returns string Delimiter used to generate fingerprints bit-vector | |
237 and vector strings. | |
238 | |
239 GenerateFingerprintsBitVectorString | |
240 $FPString = GenerateFingerprintsBitVectorString($FPBitVectorObject, | |
241 [$BitStringFormat, $BitsOrder]); | |
242 | |
243 Returns a FingerprintsString generated using | |
244 *FingerprintsBitVectorObject* and optionally specified | |
245 *BitStringFormat* and *BitsOrder* values. | |
246 | |
247 Possible *BitStringFormat* values: *BinaryString, Binary, Bin, | |
248 HexadecimalString, Hexadecimal, or Hex*. Default *BitStringFormat* | |
249 value: *BinaryString*. | |
250 | |
251 Possible *BitsOrder* values: *Ascending or Descending*. Default | |
252 *BitsOrder* value: *Ascending*. | |
253 | |
254 GenerateFingerprintsVectorString | |
255 $FPString = GenerateFingerprintsVectorString($FPVectorObject, | |
256 [$VectorStringFormat]); | |
257 | |
258 Returns a FingerprintsString generated using | |
259 *FingerprintsVectorObject* and optionally specified | |
260 *VectorStringFormat*. | |
261 | |
262 Possible *VectorStringFormat* values: *IDsAndValuesString, | |
263 IDsAndValues, IDsAndValuesPairsString, IDsAndValuesPairs, | |
264 ValuesAndIDsString, ValuesAndIDs, ValuesAndIDsPairsString, | |
265 ValuesAndIDsPairs, ValuesString, Values*. | |
266 | |
267 Default *VectorStringFormat* value: for *NumericalValues* | |
268 *FPVectorType* - *IDsAndValuesString*; for all other *FPVectorType*s | |
269 - *ValuesString*. | |
270 | |
271 GenerateFingerprintsString | |
272 $FPString = GenerateFingerprintsBitVectorString($FPBitVectorObject, | |
273 [$BitStringFormat, $BitsOrder]); | |
274 | |
275 $FPString = GenerateFingerprintsVectorString($FPVectorObject, | |
276 [$VectorStringFormat]); | |
277 | |
278 Returns a FingerprintsString generated using | |
279 *FingerprintsBitVectorObject* or *FingerprintsVectorObject* and | |
280 optionally specified parameters. | |
281 | |
282 GetFingerprintsStringTypeAndDescription | |
283 ($FPType, $FPDescription) = GetFingerprintsStringTypeAndDescription( | |
284 $FPString); | |
285 | |
286 Returns FingerprintsStringType and *FingerprintsStringDescription* | |
287 strings for FingerprintsString corresponding to | |
288 FingerprintsBitVectorObject or FingerprintsVectorObject. | |
289 | |
290 GetFingerprintsStringValues | |
291 @FPStringValues = GetFingerprintsStringValues($FPString); | |
292 | |
293 Parses FingerprintsString corresponding to | |
294 FingerprintsBitVectorObject or FingerprintsVectorObject and returns | |
295 its individual component values as an array. | |
296 | |
297 ParseFingerprintsBitVectorString | |
298 $FPBitVectorObject = ParseFingerprintsBitVectorString($FPBitVectorString, | |
299 [$ValidateValues]); | |
300 | |
301 Returns FingerprintsBitVectorObject generated by parsing | |
302 *FingerprintsBitVectorString* with optional validation of its | |
303 component values. | |
304 | |
305 ParseFingerprintsString | |
306 $FPBitVectorObject = ParseFingerprintsBitVectorString($FPBitVectorString, | |
307 [$ValidateValues]); | |
308 | |
309 $FPVectorObject = ParseFingerprintsVectorString($FPVectorString, | |
310 [$ValidateValues]); | |
311 | |
312 Returns FingerprintsBitVectorObject or *FingerprintsVectorObject* | |
313 generated by parsing *FingerprintsBitVectorString* or | |
314 *FingerprintsVectorString* with optional validation of its component | |
315 values. | |
316 | |
317 ParseFingerprintsVectorString | |
318 $FPVectorObject = ParseFingerprintsVectorString($FPVectorString, | |
319 [$ValidateValues]); | |
320 | |
321 Returns FingerprintsVectorObject generated by parsing | |
322 *FingerprintsVectorString* with optional validation of its component | |
323 values. | |
324 | |
325 AUTHOR | |
326 Manish Sud <msud@san.rr.com> | |
327 | |
328 SEE ALSO | |
329 BitVector.pm, FingerprintsBitVector.pm, FingerprintsVector.pm, Vector.pm | |
330 | |
331 COPYRIGHT | |
332 Copyright (C) 2015 Manish Sud. All rights reserved. | |
333 | |
334 This file is part of MayaChemTools. | |
335 | |
336 MayaChemTools is free software; you can redistribute it and/or modify it | |
337 under the terms of the GNU Lesser General Public License as published by | |
338 the Free Software Foundation; either version 3 of the License, or (at | |
339 your option) any later version. | |
340 |