comparison lib/data/VDWAtomRadiiAndVolumes.csv @ 0:4816e4a8ae95 draft default tip

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1 #
2 # $RCSfile: VDWAtomRadiiAndVolumes.csv,v $
3 # $Date: 2015/02/28 20:48:33 $
4 # $Revision: 1.11 $
5 #
6 # Author: Manish Sud <msud@san.rr.com>
7 #
8 # Copyright (C) 2015 Manish Sud. All rights reserved.
9 #
10 # This file is part of MayaChemTools.
11 #
12 # MayaChemTools is free software; you can redistribute it and/or modify it under
13 # the terms of the GNU Lesser General Public License as published by the Free
14 # Software Foundation; either version 3 of the License, or (at your option) any
15 # later version.
16 #
17 # MayaChemTools is distributed in the hope that it will be useful, but without
18 # any warranty; without even the implied warranty of merchantability of fitness
19 # for a particular purpose. See the GNU Lesser General Public License for more
20 # details.
21 #
22 # You should have received a copy of the GNU Lesser General Public License
23 # along with MayaChemTools; if not, see <http://www.gnu.org/licenses/> or
24 # write to the Free Software Foundation Inc., 59 Temple Place, Suite 330,
25 # Boston, MA, 02111-1307, USA.
26 #
27 #
28 # Original data sources:
29 # o Table 2 in Yuan et al. [ Ref 93 ]
30 # o PeriodicTableElementsData.csv supplied with MayaChemTools
31 #
32 # Notes:
33 # o The current release of MayaChemTools provide data van der Waals atom radii and atom
34 # volumes data for 38 elements. Table 2 [ Ref 93 ] contains data for 15 elements.
35 #
36 # o After converting valid van der Waals atom radius data from pm (picometer) to A (Angstrom)
37 # A (Angstrom) available under column name VanderWaalsRadius in PeriodicTableElementsData.csv
38 # data file, van der Waals atom volume is calculated using: 4/3 * PI * (Radius ** 3)
39 #
40 # o For elements specified in Table 2 [ Ref 93 ] - H, B, C, N, O, F, Si, P, S, Cl, As, Se, Br, Te, I -
41 # van der Waals atom radii and calculated atom volumes match the values in the table.
42 #
43 #
44 "AtomTypeSymbol","VDWAtomRadius(A)","VDWAtomVolume(A**3)/molecule"
45 "H","1.20","7.24"
46 "He","1.40","11.49"
47 "Li","1.82","25.25"
48 "B","2.13","40.48"
49 "C","1.70","20.58"
50 "N","1.55","15.60"
51 "O","1.52","14.71"
52 "F","1.47","13.31"
53 "Ne","1.54","15.30"
54 "Na","2.27","49.00"
55 "Mg","1.73","21.69"
56 "Si","2.10","38.79"
57 "P","1.80","24.43"
58 "S","1.80","24.43"
59 "Cl","1.75","22.45"
60 "Ar","1.88","27.83"
61 "K","2.75","87.11"
62 "Ni","1.63","18.14"
63 "Cu","1.40","11.49"
64 "Zn","1.39","11.25"
65 "Ga","1.87","27.39"
66 "As","1.85","26.52"
67 "Se","1.90","28.73"
68 "Br","1.85","26.52"
69 "Kr","2.02","34.53"
70 "Pd","1.63","18.14"
71 "Ag","1.72","21.31"
72 "Cd","1.58","16.52"
73 "In","1.93","30.11"
74 "Sn","2.17","42.80"
75 "Te","2.06","36.62"
76 "I","1.98","32.52"
77 "Xe","2.16","42.21"
78 "Pt","1.75","22.45"
79 "Au","1.66","19.16"
80 "Hg","1.55","15.60"
81 "Tl","1.96","31.54"
82 "Pb","2.02","34.53"