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comparison lib/data/VDWAtomRadiiAndVolumes.csv @ 0:4816e4a8ae95 draft default tip
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| author | deepakjadmin |
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| date | Wed, 20 Jan 2016 09:23:18 -0500 |
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| -1:000000000000 | 0:4816e4a8ae95 |
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| 1 # | |
| 2 # $RCSfile: VDWAtomRadiiAndVolumes.csv,v $ | |
| 3 # $Date: 2015/02/28 20:48:33 $ | |
| 4 # $Revision: 1.11 $ | |
| 5 # | |
| 6 # Author: Manish Sud <msud@san.rr.com> | |
| 7 # | |
| 8 # Copyright (C) 2015 Manish Sud. All rights reserved. | |
| 9 # | |
| 10 # This file is part of MayaChemTools. | |
| 11 # | |
| 12 # MayaChemTools is free software; you can redistribute it and/or modify it under | |
| 13 # the terms of the GNU Lesser General Public License as published by the Free | |
| 14 # Software Foundation; either version 3 of the License, or (at your option) any | |
| 15 # later version. | |
| 16 # | |
| 17 # MayaChemTools is distributed in the hope that it will be useful, but without | |
| 18 # any warranty; without even the implied warranty of merchantability of fitness | |
| 19 # for a particular purpose. See the GNU Lesser General Public License for more | |
| 20 # details. | |
| 21 # | |
| 22 # You should have received a copy of the GNU Lesser General Public License | |
| 23 # along with MayaChemTools; if not, see <http://www.gnu.org/licenses/> or | |
| 24 # write to the Free Software Foundation Inc., 59 Temple Place, Suite 330, | |
| 25 # Boston, MA, 02111-1307, USA. | |
| 26 # | |
| 27 # | |
| 28 # Original data sources: | |
| 29 # o Table 2 in Yuan et al. [ Ref 93 ] | |
| 30 # o PeriodicTableElementsData.csv supplied with MayaChemTools | |
| 31 # | |
| 32 # Notes: | |
| 33 # o The current release of MayaChemTools provide data van der Waals atom radii and atom | |
| 34 # volumes data for 38 elements. Table 2 [ Ref 93 ] contains data for 15 elements. | |
| 35 # | |
| 36 # o After converting valid van der Waals atom radius data from pm (picometer) to A (Angstrom) | |
| 37 # A (Angstrom) available under column name VanderWaalsRadius in PeriodicTableElementsData.csv | |
| 38 # data file, van der Waals atom volume is calculated using: 4/3 * PI * (Radius ** 3) | |
| 39 # | |
| 40 # o For elements specified in Table 2 [ Ref 93 ] - H, B, C, N, O, F, Si, P, S, Cl, As, Se, Br, Te, I - | |
| 41 # van der Waals atom radii and calculated atom volumes match the values in the table. | |
| 42 # | |
| 43 # | |
| 44 "AtomTypeSymbol","VDWAtomRadius(A)","VDWAtomVolume(A**3)/molecule" | |
| 45 "H","1.20","7.24" | |
| 46 "He","1.40","11.49" | |
| 47 "Li","1.82","25.25" | |
| 48 "B","2.13","40.48" | |
| 49 "C","1.70","20.58" | |
| 50 "N","1.55","15.60" | |
| 51 "O","1.52","14.71" | |
| 52 "F","1.47","13.31" | |
| 53 "Ne","1.54","15.30" | |
| 54 "Na","2.27","49.00" | |
| 55 "Mg","1.73","21.69" | |
| 56 "Si","2.10","38.79" | |
| 57 "P","1.80","24.43" | |
| 58 "S","1.80","24.43" | |
| 59 "Cl","1.75","22.45" | |
| 60 "Ar","1.88","27.83" | |
| 61 "K","2.75","87.11" | |
| 62 "Ni","1.63","18.14" | |
| 63 "Cu","1.40","11.49" | |
| 64 "Zn","1.39","11.25" | |
| 65 "Ga","1.87","27.39" | |
| 66 "As","1.85","26.52" | |
| 67 "Se","1.90","28.73" | |
| 68 "Br","1.85","26.52" | |
| 69 "Kr","2.02","34.53" | |
| 70 "Pd","1.63","18.14" | |
| 71 "Ag","1.72","21.31" | |
| 72 "Cd","1.58","16.52" | |
| 73 "In","1.93","30.11" | |
| 74 "Sn","2.17","42.80" | |
| 75 "Te","2.06","36.62" | |
| 76 "I","1.98","32.52" | |
| 77 "Xe","2.16","42.21" | |
| 78 "Pt","1.75","22.45" | |
| 79 "Au","1.66","19.16" | |
| 80 "Hg","1.55","15.60" | |
| 81 "Tl","1.96","31.54" | |
| 82 "Pb","2.02","34.53" |
