Mercurial > repos > deepakjadmin > feature_selection_test1

changeset 10:6f84d62d1702 draft

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Uploaded
author deepakjadmin
date Fri, 06 Jan 2017 00:57:24 -0500
parents 0a68c3be76a3
children a9601a3dda6f
files toolrfe.xml
diffstat 1 files changed, 6 insertions(+), 5 deletions(-) [+]
line wrap: on
line diff
--- a/toolrfe.xml	Thu Jan 05 14:15:43 2017 -0500
+++ b/toolrfe.xml	Fri Jan 06 00:57:24 2017 -0500
@@ -5,10 +5,11 @@
 <!--command interpreter="bash">step3run.sh $file1 $model $output1  2>/dev/null </command-->
 <requirements>
         <requirement type="set_environment">FEATURE_SELECTION_R</requirement>
-                 <requirement type="set_environment">R_ROOT_DIR</requirement>
-    <requirement type="package" version="3.2.0">R</requirement>
-    <requirement type="package" version="1.0.0">caret-tools</requirement>
-</requirements>
+                <requirements>
+    		<requirement type="package" version="3.2.1">R</requirement>
+    		<requirement type="package" version="1.0">carettools</requirement>
+	</requirements>
+
 <command interpreter="Rscript">feature_selection.R $input $profile $finalset $function1 $resampling $repeat $number $corcutoff $SAMPLING $cores> /dev/null 2>&amp;1 </command>
 
 <inputs>
@@ -91,7 +92,7 @@
           <param name="repeat"  value="1" />
           <param name="number"  value="5" />
           <param name="SAMPLING"  value="garb" />
-
+          <param name="cores"  value="1" />
           <output name="profile" file="rfprofile.RData" compare="sim_size" delta="2000000" />
           <output name="finalset" file="selected_fet.RData" compare="sim_size" delta="2000000"/>
     </test>