Mercurial > repos > deepakjadmin > caret_reg_tool0

changeset 0:9ec55e74a14e draft default tip

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author deepakjadmin
date Fri, 22 Jan 2016 14:09:34 -0500
parents
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files tool12.xml tool_dependencies.xml
diffstat 2 files changed, 54 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool12.xml	Fri Jan 22 14:09:34 2016 -0500
@@ -0,0 +1,47 @@
+<tool id="AASDjdlV2" name="Concatenate descriptor and response file">
+<description>
+This Tool Concatenates Descriptor file and response value conatining file for regression analysis
+ </description>
+ <!--command interpreter="bash">step1.sh $file1 $output1 </command-->
+ <command interpreter="">/usr/bin/paste -d ',' $descriptors $response > $completefile </command>
+ <inputs>
+ <param format="csv" name="descriptors" type="data" label="Select descriptor file " help="CSV format" />
+ <param format="txt" name="response" type="data" label="Select response file " help="CSV format" />
+ </inputs>
+ <outputs>
+ <data format="csv" name="completefile" label="Descriptor file with response " />
+ </outputs>
+<help>
+.. class:: infomark
+
+**Input descriptor "csv file" format must be as given below :**
+
+
+Name,feature1,feaure2,feature3,..,featureN
+
+
+cpd1,623,0.4,3.4,..,..
+                      
+cpd2,234,0.9,5.6,..,.. 
+
+cpd3,567,0.5,3.14,..,..
+
+cpd4,231,0.1,1.2,..,.. 
+
+here "cpd" stands for name or id of a compound. It is rowname with no column header.     
+
+
+**Input response csv file must be as given below :**
+
+Response
+
+0.21
+
+0.36
+
+0.98
+
+1.39
+
+</help>
+</tool>
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Fri Jan 22 14:09:34 2016 -0500
@@ -0,0 +1,7 @@
+<?xml version="1.0"?>
+<tool_dependency>
+<readme>
+This tool concatenates descriptor file corresponding 
+response variable conataining file.
+</readme>>
+</tool_dependency>