Mercurial > repos > deepakjadmin > care_tool_jan21_test1
view tool1V2.xml @ 0:ee374e48024f draft default tip
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author | deepakjadmin |
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date | Thu, 21 Jan 2016 00:34:58 -0500 |
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<tool id="AdsmkdqaddodfdalV2" name="Prepare input file"> <description> This Tool Converts Input csv File into RData Which Is Further Used for Model Building </description> <!--command interpreter="bash">step1.sh $file1 $output1 </command--> <requirements> <requirement type="set_environment">R_ROOT_DIR</requirement> <requirement type="package" version="3.2.0">R</requirement> </requirements> <command interpreter="Rscript">tool1/csv2rdatatrain.R $file1 $RData </command> <inputs> <param format="csv" name="file1" type="data" label="Select file containing training data" help="CSV format" /> </inputs> <outputs> <data format="RData" name="RData" label="Input RData" /> </outputs> <help> .. class:: infomark **Input "csv file" format must be as given below :** "",feature1,feaure2,feature3,..,activity cpd1,623,0.4,3.4,..,Active cpd2,234,0.9,5.6,..,Inactive cpd3,567,0.5,3.14,..,Active cpd4,231,0.1,1.2,..,Inactive here "cpd" stands for name or id of a compound. It is rowname with no column header. </help> </tool>