Mercurial > repos > dchristiany > data_manager_proteore

diff data_manager/resource_building.py @ 51:8f6ddad93e9f draft

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planemo upload commit 12b0b3e18cd7af9a8588906fa2ec199b9d2a770f-dirty
author dchristiany
date Fri, 01 Mar 2019 09:37:07 -0500
parents 4b6c6f9b4de0
children
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line diff
--- a/data_manager/resource_building.py	Fri Feb 01 11:22:06 2019 -0500
+++ b/data_manager/resource_building.py	Fri Mar 01 09:37:07 2019 -0500
@@ -52,7 +52,7 @@
     tissue_name = tissue_name + " " + time.strftime("%d/%m/%Y")
     tissue_id = tissue_name.replace(" ","_").replace("/","-")
 
-    data_table_entry = dict(id=tissue_id, name = tissue_name, value = tissue, path = path)
+    data_table_entry = dict(id=tissue_id, name = tissue_name, tissue = tissue, value = path)
     _add_data_table_entry(data_manager_dict, data_table_entry, "proteore_protein_atlas")
 
 
@@ -476,7 +476,7 @@
     with open(path, 'w') as handle:
         json.dump(dico, handle, sort_keys=True)
 
-    data_table_entry = dict(id=id, name = name, value = species, path = path)
+    data_table_entry = dict(id=id, name = name, species = species, value = path)
     _add_data_table_entry(data_manager_dict, data_table_entry, "proteore_"+interactome+"_dictionaries")