Mercurial > repos > dchristiany > data_manager_proteore
comparison data_manager/resource_building.py @ 42:5a37a086c9a8 draft
planemo upload commit 43e2a01d7519104c2c16510e4dbdc023e65c49c7-dirty
| author | dchristiany |
|---|---|
| date | Tue, 29 Jan 2019 11:08:07 -0500 |
| parents | 4062484f2cee |
| children | 3febf3d1139a |
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| 41:4062484f2cee | 42:5a37a086c9a8 |
|---|---|
| 394 dico['network']=dico_network | 394 dico['network']=dico_network |
| 395 dico['nodes']=dico_nodes | 395 dico['nodes']=dico_nodes |
| 396 dico['convert']=dico_GeneID_to_UniProt | 396 dico['convert']=dico_GeneID_to_UniProt |
| 397 | 397 |
| 398 #writing output | 398 #writing output |
| 399 output_file = species+'_'+interactome+'_dict_'+ time.strftime("%d-%m-%Y") + ".json" | 399 output_file = species+'_'+interactome+'_'+ time.strftime("%d-%m-%Y") + ".json" |
| 400 path = os.path.join(target_directory,output_file) | 400 path = os.path.join(target_directory,output_file) |
| 401 name = species+" ("+species_dict[species]+") "+time.strftime("%d/%m/%Y") | 401 name = species+" ("+species_dict[species]+") "+time.strftime("%d/%m/%Y") |
| 402 id = species+"_"+interactome+"_"+ time.strftime("%d-%m-%Y") | 402 id = species+"_"+interactome+"_"+ time.strftime("%d-%m-%Y") |
| 403 | 403 |
| 404 with open(path, 'w') as handle: | 404 with open(path, 'w') as handle: |
