# HG changeset patch
# User davidvanzessen
# Date 1399537425 14400
# Node ID 4f50fd2821a63486721a99c08e1fae56566031c6
# Parent  25cd500a0852fac7cf79ac3391baad7f659d2182
Uploaded

diff -r 25cd500a0852 -r 4f50fd2821a6 demultiplex.xml
--- a/demultiplex.xml	Thu May 08 04:17:59 2014 -0400
+++ b/demultiplex.xml	Thu May 08 04:23:45 2014 -0400
@@ -4,7 +4,7 @@
 		<requirement type="package" version="0.0.13">fastx_toolkit</requirement>
 	</requirements>
 	<command interpreter="bash">
-		r_wrapper.sh $input $out_file $out_file.files_path $EOL $mismatches $partial $input.name
+		r_wrapper.sh $input $out_file $out_file.files_path $where $mismatches $partial $input.name
 		#for $i, $b in enumerate($barcodes)
             "$b.id"
             "$b.mid"