diff r_wrapper.sh @ 24:5454af6fece1 draft

Uploaded

--- a/r_wrapper.sh	Fri Jan 16 07:37:41 2015 -0500
+++ b/r_wrapper.sh	Fri Jan 23 03:06:43 2015 -0500
@@ -65,7 +65,8 @@
 if [[ "$useD" == "true" ]] ; then
 	echo "<img src='DPlot.png'/>" >> $outputFile
 fi
-echo "<img src='JPlot.png'/></div>" >> $outputFile
+echo "<img src='JPlot.png'/>" >> $outputFile
+echo "<img src='AAComposition.png'/></div>" >> $outputFile
 
 count=1
 echo "<div class='tabbertab' title='Heatmaps'><div class='tabber'>" >> $outputFile
@@ -170,6 +171,7 @@
 	echo "<tr><td>The dataset used to generate the D gene frequency graph</td><td><a href='DFrequency.csv'>Download</a></td></tr>" >> $outputFile
 fi
 echo "<tr><td>The dataset used to generate the J gene frequency graph</td><td><a href='JFrequency.csv'>Download</a></td></tr>" >> $outputFile
+echo "<tr><td>The dataset used to generate the AA composition graph</td><td><a href='AAComposition.csv'>Download</a></td></tr>" >> $outputFile
 
 for sample in $samples; do
 	if [[ "$useD" == "true" ]] ; then