diff tool_dependencies.xml @ 0:edcce37b28b8 draft

Uploaded

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Wed Sep 25 09:03:29 2013 -0400
@@ -0,0 +1,28 @@
+<?xml version="1.0"?>
+<tool_dependency>
+	<set_environment version="1.0">            
+    </set_environment>
+    
+	<package name="igBlastn" version="1.0.0"> 
+        <install version="1.0">
+            <actions>
+            	<action type="download_by_url" target_filename="R-3.0.1.tar.gz">
+            		http://cran.rstudio.com/src/base/R-3/R-3.0.1.tar.gz
+            	</action>
+                <action type="shell_command">./configure --with-x=no</action>
+                <action type="shell_command">make</action>               	
+            	
+            	<action type="move_directory_files">
+		    		<source_directory>R-3.0.1</source_directory>
+			   		<destination_directory>$INSTALL_DIR/R-3.0.1</destination_directory>
+	       		</action>
+             
+                <action type="set_environment">
+                	<environment_variable name="R_LOCATION" action="set_to">$INSTALL_DIR/R-3.0.1</environment_variable>
+                </action>
+        </install>
+        <readme>
+			Download and configure R.
+        </readme>
+    </package>
+</tool_dependency>