Mercurial > repos > davidvanzessen > mutation_analysis

diff change_o/makedb.sh @ 125:e87dcca14bd6 draft

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Uploaded
author davidvanzessen
date Mon, 29 Aug 2016 03:28:49 -0400
parents 613278c1bde0
children
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--- a/change_o/makedb.sh	Mon Aug 22 09:11:17 2016 -0400
+++ b/change_o/makedb.sh	Mon Aug 29 03:28:49 2016 -0400
@@ -29,7 +29,10 @@
 
 echo "makedb: $PWD/outdir"
 
-/data/users/david/anaconda3/bin/python $dir/MakeDb.py imgt -i $input --outdir $PWD/outdir --outname output $noparse $scores $regions
+python3 $dir/MakeDb.py imgt -i $input --outdir $PWD/outdir --outname output $noparse $scores $regions
+#/data/users/david/anaconda3/bin/python $dir/MakeDb.py imgt -i $input --outdir $PWD/outdir --outname output $noparse $scores $regions
 #/home/galaxy/anaconda3/bin/python $dir/MakeDb.py imgt -i $input --outdir $PWD/outdir --outname output $noparse $scores $regions
 
 mv $PWD/outdir/output_db-pass.tab $output
+
+rm -rf $PWD/outdir/