Mercurial > repos > davidvanzessen > mutation_analysis
diff gene_identification.py @ 92:b869a126e2c4 draft
Uploaded
author | davidvanzessen |
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date | Mon, 06 Jun 2016 08:26:54 -0400 |
parents | 0fdd90f7c654 |
children | 53fb2948726e |
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--- a/gene_identification.py Fri Jun 03 10:35:52 2016 -0400 +++ b/gene_identification.py Mon Jun 06 08:26:54 2016 -0400 @@ -160,9 +160,9 @@ chunksInCM = len(compiledregex["cm"]) requiredChunkPercentage = 0.7 varsInCA = float(len(ca1.keys()) * 2) -varsInCG = float(len(cg1.keys()) * 2) - 1 # -1 because the sliding window doesn't hit the first nt twice +varsInCG = float(len(cg1.keys()) * 2) - 2 # -1 because the sliding window doesn't hit the first nt twice varsInCM = 0 -requiredVarPercentage = 0.7 + first = True