Mercurial > repos > davidvanzessen > imgt_convert
view imgtconvert.xml @ 4:83a2a084577f draft
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author | davidvanzessen |
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date | Fri, 29 Nov 2013 07:07:49 -0500 |
parents | 75fe272c4b78 |
children | 16dc80341862 |
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<tool id="imgtconvert" name="IMGT Convert" version="1.0"> <description>Converting the 1_, 5_ and 6_ files</description> <command interpreter="bash"> imgtconvert.sh $in_file $out_file </command> <inputs> <param name="in_file" type="data" label="Archive with files" /> </inputs> <outputs> <data format="tabular" name="out_file" /> </outputs> <help> Converting all 1_Summary, 5_AA-sequence and 6_Junction files belonging to a sample from an archive (supported: 7z, rar, tar, tar.bz2, tar.gz and zip) into a single file to be used in the Immune repertoire toolchain (Step 3) </help> </tool>