Mercurial > repos > davidvanzessen > argalaxy_tools

changeset 8:34d5e6df3247 draft

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Uploaded
author davidvanzessen
date Thu, 30 Jul 2015 09:56:17 -0400
parents c5cffbd8fe9d
children 079eed22fdb6
files igblast/igblast.sh
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/igblast/igblast.sh	Thu Jul 30 09:53:27 2015 -0400
+++ b/igblast/igblast.sh	Thu Jul 30 09:56:17 2015 -0400
@@ -10,6 +10,6 @@
 
 echo "$input $species $locus $output"
 
-java -jar $IGBLASTWRP/igblastwrp.jar -cf -S $species -R $locus ${input} $PWD/blasted_output
+java -Xmx64G -jar $IGBLASTWRP/igblastwrp.jar -cf -S $species -R $locus ${input} $PWD/blasted_output
 
 Rscript --verbose $dir/igblast.r "$PWD/blasted_output.L2.txt" "$output" 2>&1