# HG changeset patch
# User davidvanzessen
# Date 1452509454 18000
# Node ID 0f6885b14628f13651a9ea0a1236377815e522be
# Parent  672d5e010b1ff40f0a02e37af3c840019fd3626f
Uploaded

diff -r 672d5e010b1f -r 0f6885b14628 complete_immunerepertoire.xml
--- a/complete_immunerepertoire.xml	Fri Dec 25 05:35:06 2015 -0500
+++ b/complete_immunerepertoire.xml	Mon Jan 11 05:50:54 2016 -0500
@@ -114,6 +114,7 @@
 	</outputs>
 	<requirements>
 		<requirement type="package" version="0.6">igblastwrp</requirement>
+		<requirement type="package" version="3.3">weblogo</requirement>
 	</requirements>
 	<help>
 		The entire Immune Repertoire pipeline as a single tool, input several FASTA files or IMGT zip/txz files, give them an ID and it will BLAST/parse, merge and plot them.
diff -r 672d5e010b1f -r 0f6885b14628 report_clonality_igg.xml
--- a/report_clonality_igg.xml	Fri Dec 25 05:35:06 2015 -0500
+++ b/report_clonality_igg.xml	Mon Jan 11 05:50:54 2016 -0500
@@ -99,6 +99,9 @@
 	<outputs>
 		<data format="html" name="out_file" />
 	</outputs>
+	<requirements>
+		<requirement type="package" version="3.3">weblogo</requirement>
+	</requirements>
 	<help>		
 **INPUT**
 
diff -r 672d5e010b1f -r 0f6885b14628 tool_dependencies.xml
--- a/tool_dependencies.xml	Fri Dec 25 05:35:06 2015 -0500
+++ b/tool_dependencies.xml	Mon Jan 11 05:50:54 2016 -0500
@@ -17,7 +17,7 @@
                     <destination>$INSTALL_DIR/</destination>
                 </action>
                 <action type="set_environment">
-                    <environment_variable name="IGBLASTWRP" action="set_to">$INSTALL_DIR/</environment_variable>
+                    <environment_variable action="set_to" name="IGBLASTWRP">$INSTALL_DIR/</environment_variable>
                 </action>
             </actions>
         </install>
@@ -25,4 +25,7 @@
 Downloads https://github.com/mikessh/higblast/
         </readme>
     </package>
+    <package name="weblogo" version="3.3">
+      <repository changeset_revision="18cb94906560" name="package_weblogo_3_3" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
 </tool_dependency>