Mercurial > repos > davidvanzessen > argalaxy_tools

view tool_dependencies.xml @ 57:16c7fc1c4bf8 draft

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author davidvanzessen
date Fri, 18 Mar 2016 07:50:34 -0400
parents 4c5033eb708f
children a073fa12ef98
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<?xml version="1.0"?>
<tool_dependency>
	<set_environment version="1.0">            
  </set_environment>
    
	<package name="blastn" version="1.0"> 
        <install version="1.0">
            <actions>
							<action type="download_by_url">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.30/ncbi-blast-2.2.30+-x64-linux.tar.gz</action>
							<action type="move_file">
								<source>bin/blastn</source>
								<destination>$INSTALL_DIR</destination>
							</action>
							<action type="set_environment">
								<environment_variable name="BLASTN_DIR" action="set_to">$INSTALL_DIR</environment_variable>
							</action>
            </actions>
        </install>
        <readme>
					downloads blast (ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.2.30/ncbi-blast-2.2.30+-x64-linux.tar.gz) and keeps the blastn executable
        </readme>
    </package>
</tool_dependency>