Mercurial > repos > davidvanzessen > argalaxy_tools

diff report_clonality/r_wrapper.sh @ 74:08254c202db7 draft

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Uploaded
author davidvanzessen
date Mon, 05 Sep 2016 03:57:24 -0400
parents 93c7d58a292c
children 899ca5c9601f
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--- a/report_clonality/r_wrapper.sh	Thu Aug 25 07:15:27 2016 -0400
+++ b/report_clonality/r_wrapper.sh	Mon Sep 05 03:57:24 2016 -0400
@@ -54,6 +54,10 @@
 cp $dir/circos/* $outputDir/circos/
 CIRCOSTOOLS="/data/galaxy/galaxy-dist/toolsheddependencies/circos/0.64/saskia-hiltemann/cg_circos_plots/bbfdd52d64fd/circos-tools-0.21/tools"
 CIRCOSDIR="/data/galaxy/galaxy-dist/toolsheddependencies/circos/0.64/saskia-hiltemann/cg_circos_plots/bbfdd52d64fd/bin/"
+
+CIRCOSTOOLS="/home/galaxy/circos/circos-tools-0.22/tools"
+CIRCOSDIR="/home/galaxy/Anaconda3/bin"
+
 USECIRCOS="no"
 if [ -d "$CIRCOSDIR" ]; then
 	USECIRCOS="yes"