comparison report_clonality/r_wrapper.sh @ 67:69a6bba9ada9 draft

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66:7696dd687f39

	if [[ "$useD" == "true" ]] ; then
		echo "<tr><td>The data used to generate the DJ heatmap for $sample.</td><td><a href='HeatmapDJ_$sample.csv'>Download</a></td></tr>" >> $outputFile
	fi
done

echo "</table>" >> $outputFile
echo "</div></html>" >> $outputFile

67:69a6bba9ada9

	if [[ "$useD" == "true" ]] ; then
		echo "<tr><td>The data used to generate the DJ heatmap for $sample.</td><td><a href='HeatmapDJ_$sample.csv'>Download</a></td></tr>" >> $outputFile
	fi
done

echo "<tr><td>A frequency count of V Gene + J Gene + CDR3</td><td><a href='VJCDR3_count.txt'>Download</a></td></tr>" >> $outputFile

echo "</table>" >> $outputFile
echo "</div></html>" >> $outputFile