Mercurial > repos > davidvanzessen > argalaxy_tools
annotate igparse.xml @ 46:fee06348bfad draft
Uploaded
| author | davidvanzessen |
|---|---|
| date | Wed, 27 Jan 2016 08:39:16 -0500 |
| parents | f90fbc15b35a |
| children |
| rev | line source |
|---|---|
| 0 | 1 <tool id="igblastparser_igg" name="igBLASTparser" version="0.2.0"> |
| 2 <description> </description> | |
| 3 <command interpreter="perl"> | |
| 4 igblastparser/igparse.pl $input 0 2>/dev/null | grep -v "D:" | cut -f2- > $output | |
| 5 </command> | |
| 6 <inputs> | |
| 7 <param name="input" type="data" format="text" label="igBLASTn report"/> | |
| 8 </inputs> | |
| 9 <outputs> | |
| 10 <data name="output" format="tabular" label="${input.name}-parsed" /> | |
| 11 </outputs> | |
| 12 <help> | |
| 13 Step 2 of the Immune Repertoire tools, extracts the relevant information needed from the reports generated by igblast (Step 1) | |
| 14 </help> | |
| 15 </tool> |