Mercurial > repos > dave > rna_starsolo

comparison test-data/rnastar_test.log @ 0:8ea3e134b4db draft default tip

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/rgrnastar commit 9db648ed931f0243c8ce6fe21fff9a06040fcc30-dirty"
author dave
date Thu, 30 Jul 2020 14:37:28 +0000
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-1:000000000000 0:8ea3e134b4db
1 Started job on | .*
2 Started mapping on | .*
3 Finished on | .*
4 Mapping speed, Million of reads per hour | .*
5
6 Number of input reads | 100
7 Average input read length | 75
8 UNIQUE READS:
9 Uniquely mapped reads number | 99
10 Uniquely mapped reads % | 99.00%
11 Average mapped length | 74.65
12 Number of splices: Total | 52
13 Number of splices: Annotated (sjdb) | 0
14 Number of splices: GT/AG | 52
15 Number of splices: GC/AG | 0
16 Number of splices: AT/AC | 0
17 Number of splices: Non-canonical | 0
18 Mismatch rate per base, % | 2.00%
19 Deletion rate per base | 0.00%
20 Deletion average length | 0.00
21 Insertion rate per base | 0.00%
22 Insertion average length | 0.00
23 MULTI-MAPPING READS:
24 Number of reads mapped to multiple loci | 1
25 % of reads mapped to multiple loci | 1.00%
26 Number of reads mapped to too many loci | 0
27 % of reads mapped to too many loci | 0.00%
28 UNMAPPED READS:
29 % of reads unmapped: too many mismatches | 0.00%
30 % of reads unmapped: too short | 0.00%
31 % of reads unmapped: other | 0.00%
32 CHIMERIC READS:
33 Number of chimeric reads | 0
34 % of chimeric reads | 0.00%