diff test-data/files/NODE_10.aln @ 0:9a3a2e04f47a draft default tip

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author dave
date Mon, 10 Jun 2019 16:04:10 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/files/NODE_10.aln	Mon Jun 10 16:04:10 2019 -0400
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+>K03455|HIVHXB2CG_1312_1798_2_0_0_1_0_0_a/1
+---------------------------------TTATCAGAAGG----------------
+AGCCACCCCACAAGATTTAAAC--ACCATGCTACACCC-------AGTGGGGGGACATCA
+AGCAGCCA--
+>K03455|HIVHXB2CG_1302_1790_0_0_0_1_0_0_1c/1
+-----------------------GTTTTCAGCATTATCAGAAGG----------------
+AGCCACCCCACAAGATTTAAAC--ACCATGCTAAACAC-------AGTGGGGGGACAT--
+----------
+>K03455|HIVHXB2CG_1286_1769_0_0_0_4_0_0_0/1
+-------CAGAAGTGATACCCATGTTTTCAGCATTATCAGAAGG----------------
+AGCCACCCCACAAGATTTAAAC--ACCATGCTAAA-------------------------
+----------
+>K03455|HIVHXB2CG_6810_7300_0_0_0_0_0_0_2d/1
+-------TGT-------------AACACCTCAGTCATTA------CACAGGCCTGTCCAA
+AGGTATCCTTTGAGCCAATTCC--CATACATTATTGTG----------------------
+----------
+>K03455|HIVHXB2CG_6323_6872_1_0_0_2_0_0_50/1
+-------ATG-------------TATG---------------------GGAATTGGCTGA
+AAGGATACCTTTGGACAGGCCT--GAGTAATGACTGAGGTGTTACAA---------CTTG
+TC--------
+>K03455|HIVHXB2CG_7609_8146_1_0_0_1_0_0_5e/1
+-------AA--------------GCTTGTGTAATTGTTAATTTC---TCTGTCCCACTCC
+ATCCAGGTCGTGTGATTCCAAC--TCTGTTCCAG--------------------------
+AG--------
+>K03455|HIVHXB2CG_2685_3250_0_0_0_0_0_0_46/1
+-------AA--------------AATTTCAAA----------------------------
+AATTGGGCCTGAAAATCCATAC--AATACTCCAGTATT-TGCCATAAAGAAAAAAGACAG
+TA--------
+>K03455|HIVHXB2CG_217_724_2_1_0_2_0_0_36/1
+-------GC--------------CTGCATGGAATGGATGACCCGGAGAGAGAAGTGTTAG
+AGTGGAGGTTTGAGAGCCACCT--AGCAATTCA---------------------------
+----------
+>K03455|HIVHXB2CG_8325_8818_2_0_0_2_0_0_15/1
+-------GTA-------------CTTTCTATAGTGAATAGAGTTAGGCAGGTATATTCAC
+CATTATCGTTTGAGACCCACCT--CCCAACCC----------------------------
+----------
+>K03455|HIVHXB2CG_756_1235_2_0_0_1_0_0_34/1
+-----------------------------GGT----------------------------
+GATATGGGCTGATGTACCATTT--GCCCCTGGATGTTC-TGCACTATAGGGTAATTTTGG
+CTGACCTGAT
+>K03455|HIVHXB2CG_1835_2322_3_0_0_1_0_0_57/1
+-------ATAGAG----------CTTCCTTTAGTTGCCCCCCTATCTTTATTGTGACGAG
+GGGACGTTGCCAAAGAGTGACC--TG--------------------------AGG-----
+----------
+>K03455|HIVHXB2CG_2894_3537_2_0_0_0_0_0_18/1
+-------------------------------------------TTTTTCAGTTCGCTTAG
+ATGAAGACTTCAGGCAGTATAC--TGCATTTACCATACCTAGTATAAACAATGAG-----
+----------
+>K03455|HIVHXB2CG_3672_4151_0_0_0_1_0_0_27/1
+ATAACCACAGAA-----------------AGCATAGTAATATGG----------------
+GGAAAGACTCCTAAATTTAAACTGCCCATACAAAA---------------GGAAACAT--
+----------