Mercurial > repos > dave > pipelign
comparison test-data/files/NODE_31.aln @ 0:9a3a2e04f47a draft default tip
Uploaded
| author | dave |
|---|---|
| date | Mon, 10 Jun 2019 16:04:10 -0400 |
| parents | |
| children |
comparison
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| -1:000000000000 | 0:9a3a2e04f47a |
|---|---|
| 1 >K03455|HIVHXB2CG_418_930_3_0_0_1_0_0_14/1 | |
| 2 ---------------------------------------------GATCCTGC------- | |
| 3 ------ATATAAGCAGCAGCTTTTTGCCTTTACTGGTTCTCTCTGGTTAGACCAGATCTG | |
| 4 AGCCTGGG----------------------- | |
| 5 >K03455|HIVHXB2CG_7976_8475_3_0_0_1_0_0_61/1 | |
| 6 --------------------------------------------CAGATACCT------- | |
| 7 ------AAATGATCAACAGCTCCTGGGGATT-TGGGGTTGCTCTGGAAAACTCATTTGCA | |
| 8 CCCCTGCT----------------------- | |
| 9 >K03455|HIVHXB2CG_7932_8405_1_0_0_1_0_0_17/1 | |
| 10 GTCTGGGGCATCAAGCAGCTCCAGGCAAGAATGCTGGCTGTGGAAAGATACCT------- | |
| 11 ------AAAGGATCAACAGCTCC------------------------------------- | |
| 12 ------------------------------- | |
| 13 >K03455|HIVHXB2CG_6869_7379_1_0_0_3_0_1_11/1 | |
| 14 ------------------------------------ACAGTAGAAAAATTCCCCTCCACC | |
| 15 ATTAAAACTGTGGTTACAATATC---------TGGGTCCCCTCC-------------TGA | |
| 16 GGATTGGT----------------------- | |
| 17 >K03455|HIVHXB2CG_6865_7379_1_0_0_0_0_1_4d/1 | |
| 18 ------------------------------------ACAGTAGAAAAATTCCCCTCCACA | |
| 19 ATTAAAACTGTGGTTACAATTTC---------TGGGTCCCCTCC-------------TGA | |
| 20 GGATTGCT----------------------- | |
| 21 >K03455|HIVHXB2CG_8069_8641_1_0_0_0_0_0_38/1 | |
| 22 TCCTG------------ACTCCAA-----------TACTGTAGGAGATTCCAC------- | |
| 23 ----------------CAATATT---------TGAGGGCTTCCCACCCCCTGCGTCCCAG | |
| 24 AAGTT-------------------------- | |
| 25 >K03455|HIVHXB2CG_6040_6545_1_0_0_0_0_0_2/1 | |
| 26 ----------------ATCCTCAT------GCATCTGTTCTACCATGTCATTTTT----- | |
| 27 ------CCACATGTTAAAATTTTCTGT-----CACATTTAC---CAATACT--------- | |
| 28 ------------------------------- | |
| 29 >K03455|HIVHXB2CG_6480_6947_0_0_0_2_0_0_32/1 | |
| 30 ----------------TT--------------GGTAAATGTGACAGAAAATTTTA----- | |
| 31 ------ACATGTGGAAAAATGACATGG-----TAGA---AC---AGATGCA--------- | |
| 32 -------------TGAGGATATAA------- | |
| 33 >K03455|HIVHXB2CG_6482_6962_0_0_0_1_0_0_35/1 | |
| 34 --------------------------------GGTAAATGTGACAGAAAATTTTA----- | |
| 35 ------ACATGTGGAAAAATGACATGG-----TAGA---AC---AGATGCA--------- | |
| 36 -------------TGAGGATATAAT-----C | |
| 37 >K03455|HIVHXB2CG_5990_6505_1_0_0_0_0_0_3f/1 | |
| 38 ------------------------------------------------------------ | |
| 39 -------------TTAAAATTTTCTGT-----CACATTTAC---CAATACTACTTCTTGT | |
| 40 GGGTTGGGGTCTGTGGGTACACAGGCATGTG | |
| 41 >K03455|HIVHXB2CG_2700_3243_0_0_0_3_1_0_51/1 | |
| 42 -------------------------------CACCCATCCAAAGGAATTGAGGTT----- | |
| 43 ------CTTT---CTGATGTTTTTTGT-----CTGGTGTGG---TAAGTCCCCACCTCGA | |
| 44 CAG---------------------------- | |
| 45 >K03455|HIVHXB2CG_313_880_0_0_0_2_0_0_54/1 | |
| 46 CTTTA------TATTTTTTCTTAC------CCCCTGGCCTTAACCGAATTTTTTC----- | |
| 47 ------CCATCGATCTAATTCTCC--------CCCGCTTAA------------------- | |
| 48 ------------------------------- | |
| 49 >K03455|HIVHXB2CG_121_652_1_0_0_0_0_0_5f/1 | |
| 50 TCC--------CTGTTCG--------------GGCGCCACTGCTAGAGATTTTCC----- | |
| 51 ------ACACTGACTAAAAGGGTCTGA-----GGGA---TCTCTAGTTACC--------- | |
| 52 ------------------------------- |