Mercurial > repos > dave > pipelign

annotate test-data/files/long.39.hmm @ 0:9a3a2e04f47a draft default tip

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Uploaded
author dave
date Mon, 10 Jun 2019 16:04:10 -0400
parents
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1 HMMER3/f [3.2.1 | June 2018]
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2 NAME long.39.aln
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3 LENG 99
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4 MAXL 200
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5 ALPH DNA
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6 RF no
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7 MM no
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8 CONS yes
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9 CS no
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10 MAP yes
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11 DATE Tue May 28 13:12:03 2019
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12 NSEQ 2
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13 EFFN 2.000000
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14 CKSUM 3832268543
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15 STATS LOCAL MSV -9.7613 0.73289
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16 STATS LOCAL VITERBI -11.5188 0.73289
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17 STATS LOCAL FORWARD -2.6614 0.73289
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18 HMM A C G T
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19 m->m m->i m->d i->m i->i d->m d->d
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20 COMPO 1.28054 1.52683 1.53556 1.23942
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22 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 *
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dave
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diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
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9a3a2e04f47a Uploaded
dave
parents:
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
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parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
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parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
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9a3a2e04f47a Uploaded
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parents:
diff changeset
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9a3a2e04f47a Uploaded
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parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
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9a3a2e04f47a Uploaded
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parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
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parents:
diff changeset
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dave
parents:
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dave
parents:
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9a3a2e04f47a Uploaded
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parents:
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dave
parents:
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9a3a2e04f47a Uploaded
dave
parents:
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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parents:
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parents:
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parents:
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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dave
parents:
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dave
parents:
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parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
diff changeset
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9a3a2e04f47a Uploaded
dave
parents:
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dave
parents:
diff changeset
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parents:
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dave
parents:
diff changeset
311 97 2.01896 1.01168 2.12953 0.95527 97 t - - -
9a3a2e04f47a Uploaded
dave
parents:
diff changeset
312 1.38629 1.38629 1.38629 1.38629
9a3a2e04f47a Uploaded
dave
parents:
diff changeset
313 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9a3a2e04f47a Uploaded
dave
parents:
diff changeset
314 98 0.28818 2.60848 2.42319 2.42940 98 a - - -
9a3a2e04f47a Uploaded
dave
parents:
diff changeset
315 1.38629 1.38629 1.38629 1.38629
9a3a2e04f47a Uploaded
dave
parents:
diff changeset
316 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547
9a3a2e04f47a Uploaded
dave
parents:
diff changeset
317 99 1.84050 1.95342 1.03654 1.06480 99 g - - -
9a3a2e04f47a Uploaded
dave
parents:
diff changeset
318 1.38629 1.38629 1.38629 1.38629
9a3a2e04f47a Uploaded
dave
parents:
diff changeset
319 0.02469 3.71357 * 1.46634 0.26236 0.00000 *
9a3a2e04f47a Uploaded
dave
parents:
diff changeset
320 //