comparison tar.py @ 7:1581c2d80588

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author da-intersect
date Thu, 11 Apr 2013 01:28:30 -0400
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children 3cff57242c39
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6:f4d22153aed1 7:1581c2d80588
1 import data, logging, binascii
2 from galaxy.datatypes.metadata import MetadataElement
3 from galaxy.datatypes import metadata
4 from galaxy.datatypes.sniff import *
5 from galaxy import eggs
6 import pkg_resources
7 pkg_resources.require( "bx-python" )
8 from urllib import urlencode, quote_plus
9 import zipfile, gzip
10 import os, subprocess, tempfile, tarfile
11 import struct
12
13 class Tar( Binary ):
14 """Class describing a BAM binary file"""
15 file_ext = "tar"
16 def sniff( self, filename ):
17 try:
18 if tarfile.is_tarfile(filename):
19 return True
20 except:
21 return False
22
23 def set_peek( self, dataset, is_multi_byte=False ):
24 if not dataset.dataset.purged:
25 dataset.peek = "Tar file"
26 dataset.blurb = data.nice_size( dataset.get_size() )
27 else:
28 dataset.peek = 'file does not exist'
29 dataset.blurb = 'file purged from disk'
30
31 def display_peek( self, dataset ):
32 try:
33 return dataset.peek
34 except:
35 return "Tar file (%s)" % ( data.nice_size( dataset.get_size() ) )
36