Mercurial > repos > cschu > featurecounts_data_manager

diff data_manager_conf.xml @ 2:b3cd759a0064 draft default tip

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author cschu
date Sun, 26 Jun 2016 17:04:24 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager_conf.xml	Sun Jun 26 17:04:24 2016 -0400
@@ -0,0 +1,21 @@
+<?xml version="1.0"?>
+<data_managers>
+    <data_manager tool_file="data_manager/featurecounts_gxfloader.xml" id="featurecounts_gxfloader" version="1.0.0">
+        <data_table name="gene_sets">
+            <output>
+              <!-- <name/UID> <dbkey> <path> <provider> <URL/reference*> -->
+                <column name="value" />
+                <column name="dbkey" />
+                <column name="path" output_ref="out_file">
+                    <move type="directory" relativize_symlinks="True">
+                        <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">featurecount_gxf/${value}</target>
+                    </move>
+                    <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/featurecount_gxf/${value}</value_translation>
+                    <value_translation type="function">abspath</value_translation>
+                </column>
+                <column name="provider" />
+                <column name="ref" />
+            </output>
+        </data_table>
+    </data_manager>
+</data_managers>