# HG changeset patch
# User cropgeeks
# Date 1523968085 14400
# Node ID dde8fec1b31ef6998a3807bb63b0db9aaaae6398
# Parent  4e2b3a96fee1763bd3c7446a75f2661a5e3583ab
Uploaded

diff -r 4e2b3a96fee1 -r dde8fec1b31e dartseq_seeduk_1.R
--- a/dartseq_seeduk_1.R	Tue Apr 17 08:21:30 2018 -0400
+++ b/dartseq_seeduk_1.R	Tue Apr 17 08:28:05 2018 -0400
@@ -184,7 +184,7 @@
 #Workaround to convert Dart format to 0-1-2 format
 library("SNPRelate")
 genofile <- snpgdsOpen("./gl2gds.gds")
-snpgdsGDS2BED(genofile, bed.fn="test", snp.id=snpset)
+#snpgdsGDS2BED(genofile, bed.fn="test", snp.id=snpset)
 #Error in .InitFile(gdsobj, https://protect-eu.mimecast.com/s/cfduCj27LTYnmOHWrcoC?domain=sample.id = https://protect-eu.mimecast.com/s/cfduCj27LTYnmOHWrcoC?domain=sample.id, https://protect-eu.mimecast.com/s/byfzCk59DIkOBwfVgChE?domain=snp.id = https://protect-eu.mimecast.com/s/byfzCk59DIkOBwfVgChE?domain=snp.id) : 
 #  object 'snpset' not found
 snpgdsGDS2BED(genofile, bed.fn="test")