# HG changeset patch
# User cropgeeks
# Date 1524216631 14400
# Node ID 8f9667afe1dce3f057bcfb6082481b77507a4ce1
# Parent  5d4376ba82eab2e1edfe214cbf1f66ad2cf5fa01
Uploaded

diff -r 5d4376ba82ea -r 8f9667afe1dc ukseed_stage1.xml
--- a/ukseed_stage1.xml	Fri Apr 20 05:15:49 2018 -0400
+++ b/ukseed_stage1.xml	Fri Apr 20 05:30:31 2018 -0400
@@ -29,15 +29,15 @@
     </stdio>
 
 <help>
-In ``UK SeeD``, a BBSRC-Newton funded project, we have deployed an advanced computing hardware and software platform for the 
+In ``UK-SeeD Data Analysis Infrastructure``, a BBSRC-Newton funded project, we have deployed an advanced computing hardware and software platform for the 
 analysis of large genomics datasets for wheat varieties. The platform integrates computing resources and bioinformatics expertise to 
 enable crop geneticists to implement sophisticated data analysis algorithms to improve the use of genetic resources for wheat and 
 other important crops. The computing platform is distributed across the partners’ sites with hardware deployed at CIMMYT (Mexico) and 
 the Earlham Institute (UK).  
 
-|JHI|
+|LOGOS|
 
-.. |JHI| image:: https://ics.hutton.ac.uk/resources/ukseed/jhi.png
+.. |LOGOS| image:: https://ics.hutton.ac.uk/resources/ukseed/logos.png
 </help>
 
     <citations>
diff -r 5d4376ba82ea -r 8f9667afe1dc ukseed_stage2.xml
--- a/ukseed_stage2.xml	Fri Apr 20 05:15:49 2018 -0400
+++ b/ukseed_stage2.xml	Fri Apr 20 05:30:31 2018 -0400
@@ -20,7 +20,7 @@
     ]]></command>
 	
     <inputs>
-        <param format="csv" name="input" type="data" label="Input file"
+        <param format="csv,txt" name="input" type="data" label="Input file"
             help="Input file of genotype data"/>
 		
 		<param name="gl_call_rate" type="float" value="0.75" label="gl_call_rate"
@@ -42,15 +42,15 @@
     </stdio>
 
 <help>
-In ``UK SeeD``, a BBSRC-Newton funded project, we have deployed an advanced computing hardware and software platform for the 
+In ``UK-SeeD Data Analysis Infrastructure``, a BBSRC-Newton funded project, we have deployed an advanced computing hardware and software platform for the 
 analysis of large genomics datasets for wheat varieties. The platform integrates computing resources and bioinformatics expertise to 
 enable crop geneticists to implement sophisticated data analysis algorithms to improve the use of genetic resources for wheat and 
 other important crops. The computing platform is distributed across the partners’ sites with hardware deployed at CIMMYT (Mexico) and 
 the Earlham Institute (UK).  
 
-|JHI|
+|LOGOS|
 
-.. |JHI| image:: https://ics.hutton.ac.uk/resources/ukseed/jhi.png
+.. |LOGOS| image:: https://ics.hutton.ac.uk/resources/ukseed/logos.png
 </help>
 
     <citations>