# HG changeset patch
# User cropgeeks
# Date 1524155890 14400
# Node ID 2a49f0396e8b4fb9d9883178560115252d8af3da
# Parent  fec5b295004dc7bd22d9943a062a54488edd6ff2
Uploaded

diff -r fec5b295004d -r 2a49f0396e8b dartseq_seeduk_1.R
--- a/dartseq_seeduk_1.R	Tue Apr 17 11:18:52 2018 -0400
+++ b/dartseq_seeduk_1.R	Thu Apr 19 12:38:10 2018 -0400
@@ -14,6 +14,7 @@
 
 #Read DarT data 
 gl <- gl.read.dart(filename=args[1],  nas = "-", topskip = 5, lastmetric = "TotalPicRepSnpTest", probar = TRUE)
+gl <- gl.filter.monomorphs(gl)
 
 #Trying to determine if one row or two row format...
 #Found  2  row(s) format. Proceed...
diff -r fec5b295004d -r 2a49f0396e8b ukseed.xml
--- a/ukseed.xml	Tue Apr 17 11:18:52 2018 -0400
+++ b/ukseed.xml	Thu Apr 19 12:38:10 2018 -0400
@@ -30,7 +30,15 @@
         <exit_code range="1:" />
     </stdio>
 
-    <help></help>
+    <help
+	The UK SeeD project...
+	
+	
+	Logos: |JHI|
+	
+	.. |JHI| image:: https://ics.hutton.ac.uk/resources/ukseed/jhi.png
+	
+	</help>
 
     <citations>
     </citations>