# HG changeset patch
# User cropgeeks
# Date 1524237345 14400
# Node ID 27b626c1c12019507ef83840f7c02343c0fef49a
# Parent  d3f3569784030f96cae1ef8f9e3658b1a0f692ac
Uploaded

diff -r d3f356978403 -r 27b626c1c120 ukseed.xml
--- a/ukseed.xml	Fri Apr 20 09:51:11 2018 -0400
+++ b/ukseed.xml	Fri Apr 20 11:15:45 2018 -0400
@@ -1,7 +1,6 @@
 <tool id="ukseed_dartseq" name="UK SeeD Dartseq Analysis" version="0.0.1">
     <description>run a dartseq analysis</description>
     <requirements>
-		<requirement type="package" version="3.4.3">r</requirement>
         <requirement type="package" version="1.12.2">bioconductor-snprelate</requirement>
 		<requirement type="package" version="1.90b4">plink</requirement>
 		<requirement type="package" version="0.8_14">r-amap</requirement>
diff -r d3f356978403 -r 27b626c1c120 ukseed_stage1.xml
--- a/ukseed_stage1.xml	Fri Apr 20 09:51:11 2018 -0400
+++ b/ukseed_stage1.xml	Fri Apr 20 11:15:45 2018 -0400
@@ -1,14 +1,12 @@
 <tool id="ukseed_stage_1" name="UK SeeD Dartseq Analysis #1" version="0.0.2">
     <description>run a dartseq analysis (stage #1)</description>
     <requirements>
-        <!--
+        <requirement type="package" version="1.12.2">bioconductor-snprelate</requirement>
 		<requirement type="package" version="1.90b4">plink</requirement>
-		<requirement type="package" version="1.12.2">bioconductor-snprelate</requirement>
-		<requirement type="package" version="2.10.0">bioconductor-qvalue</requirement>
 		<requirement type="package" version="0.8_14">r-amap</requirement>
-		<requirement type="package" version="1.2_16">r-rgdal</requirement>
 		<requirement type="package" version="1.0">r-dartr</requirement>
-		-->
+		<requirement type="package" version="1.8_0">r-labdsv</requirement>
+		<!--<requirement type="package" version="2.10.0">bioconductor-qvalue</requirement>-->
     </requirements>
 
     <command><![CDATA[
diff -r d3f356978403 -r 27b626c1c120 ukseed_stage2.xml
--- a/ukseed_stage2.xml	Fri Apr 20 09:51:11 2018 -0400
+++ b/ukseed_stage2.xml	Fri Apr 20 11:15:45 2018 -0400
@@ -1,14 +1,12 @@
 <tool id="ukseed_stage_2" name="UK SeeD Dartseq Analysis #2" version="0.0.2">
     <description>run a dartseq analysis (stage #2)</description>
     <requirements>
-        <!--
+        <requirement type="package" version="1.12.2">bioconductor-snprelate</requirement>
 		<requirement type="package" version="1.90b4">plink</requirement>
-		<requirement type="package" version="1.12.2">bioconductor-snprelate</requirement>
-		<requirement type="package" version="2.10.0">bioconductor-qvalue</requirement>
 		<requirement type="package" version="0.8_14">r-amap</requirement>
-		<requirement type="package" version="1.2_16">r-rgdal</requirement>
 		<requirement type="package" version="1.0">r-dartr</requirement>
-		-->
+		<requirement type="package" version="1.8_0">r-labdsv</requirement>
+		<!--<requirement type="package" version="2.10.0">bioconductor-qvalue</requirement>-->
     </requirements>
 
     <command><![CDATA[