Mercurial > repos > clustalomega > clustalomega
view clustalomega/test-data/clustalo_aligned2.fasta @ 0:ea6d0e588642 default tip
Migrated tool version 0.2 from old tool shed archive to new tool shed repository
| author | clustalomega |
|---|---|
| date | Tue, 07 Jun 2011 16:13:02 -0400 |
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>Q83TU5_NEIME (Q83TU5) -MLKKIK----KALFQPKKFFQDSMWLTTSPF------YLTPPRNNLFVISNLGQLNQVQ SLIKIQKLTNNLLVILYTSKNLKMPKLVHQSANKNLFESIYLFELPRSPNNITPKKLLYI YRSYKKILNIIQPAHLYMLSFTGHYSYLISIAKKKNITTHLIDEGTGTYAPLLESFSYHP TKLE----RY----LIGNNLNI-KGYIDHFDILHVPFPEYAKKIFNAKKYNRFFAHAGGI SINNNIANLQKKYQISKNDYIFVSQRYPISDDLYYKSIVEILNSISLQIKGKIFIKLHPK EMGNNYVMSLFLNM---VEINPRLVVINEPPFLIEPLIYLTNPKGIIGLASSSLIYTPLL SPSTQCLSIGELIINLIQKYSMVENTEMIQEHLEIIKKFNFINILNDLNGVISNPLF--- KTEETFETLLKSAEFAYKSKNYFQAIFYWQLASKNNITLL----GHKALWYYNALYNVKQ IYKMEYSDIFYIDNISV------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------- >B7NIU6_ECO7I (B7NIU6) MIFDASLKKLRKLFVNPIGFFRDSWFFNSKNKAEELLSPLKIKSKNIFIISNLGQLKKAE SFVQKFSKRSNYLIVLATEKNTEMPKIIVEQINNKLFSSYKVLFIPTFPNVFSLKKVIWF YNVYNYLVLNSKAKDAYFMSYAQHYAIFVYLFKKNNIRCSLIEEGTGTYKTEKENPVVNI NFYS-------EII---NSIILFHYPDLKFENVYGTYPILLKKKFNAQKFVEFKGAP-SV KSSTRIDNVIHKYSITRDDIIYANQKYLIEHTLFADSLISILLRIDKPDNARIFIKPHPK EPKKNINA---IQKAIKKAKCRDIILITEPDFLIEPVIKKAKIKHLIGLTSSSLVYAPLV SKRCQSYSIAPLMIKLCDNDKSQKGINTLRLHFDILKNFDNVKILSDDITS---PSLHDK ------RIFLGE------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------- >Q57269_ECOLX (Q57269) MIFDASLKKLRKLFVNPIGFFRDSWFFNSKNKAEELLSPLKIKSKNIFIISNLGQLKKAE SFVQKFSKRSNYLIVLATEKNTEMPKIIVEQINNKLFSSYKVLFIPTFPNVFSLKKVIWF YNVYNYLVLNSKAKDAYFMSYAQHYAIFVYLFKKNNIRCSLIEEGTGTYKTEKENPVVNI NFYS-------EII---NSIILFHYPDLKFENVYGTYPILLKKKFNAQKFVEFKGAP-SV KSSTRIDNVIHKYSITRDDIIYANQKYLIEHTLFADSLISILLRIDKPDNARIFIKPHPK EPKKNINA---IQKAIKKAKCRDIILITEPDFLIEPVIKKAKIKHLIGLTSSSLVYAPLV SKRCQSYSIAPLMIKLCDNDKSQKGINTLRLHFDILKNFDNVKILSDDITS---PSLHDK ------RIFLGE------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------- >A1KR99_NEIMF (A1KR99) -MLQKIR----KALFHPKKFFQDSQWFATPLF------SSFAPKSNLFIISTFAQLNQAH SLTKMQKLKNNLLVILYTTQNMKMPKLIQKSVDKELFSVTYMFELPRKPGIVSPKKFLYI QRGYKKLLKTIQPAHLYVMSFAGHYSSLLSLAKKMNITTHLVEEGTATYAPLLESFTYKP TKFE----QR----FVGNNLHQ-KGYFDKFDILHVAFPEYAKKIFNANEYHRFFAHSGGI STSQSIAKIQDKYRISQNDYIFVSQRYPVSDEVYYKTIVETLNQMSLRIEGKIFIKLHPK EMENKNIMSLFLNM---VTINPRLVVINEPPFLIDPLIYLTTPKGIIGLTSTSIVYTPLL SPTTQCLSIGQIVIDSIHHTAQQENTALIEEHLEIVKQFDFIKILSSIEDGIDTNSF--- KTEETLEMLLKSAEYAYKNKNFYQAIFYWQLASNNDLSVL----GYKSLWYYNALNKVKQ NYKMKYLEINYIERISLYFNDKDKMIWQNIKNDFFKYSLCNQ------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------- >Q6VNM1_NEIME (Q6VNM1) ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -YKMKYLEINYIERISLYFNDKDKMIWQDIKNDFFKYSLCNQ------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------- >Q79AE7_NEIMB (Q79AE7) -MLKKIK----KALFQPKKFFQDSMWLTTSPF------YLTPPRNNLFVISNLGQLNQVQ SLIKIQKLTNNLLVILYTSKNLKMPKLVHQSANKNLFESIYLFELPRSPNNITPKKLLYI YRSYKKILNIIQPAHLYMLSFTGHYSYLISIAK--------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------- >Q4W584_NEIMB (Q4W584) -MLKKIK----KALFQPKKFFQDSMWLTTSPF------YLTPPRNNLFVISNLGQLNQVQ SLIKIQKLTNNLLVILYTSKNLKMPKLVHQSANKNLFESIYLFELPRSPNNITPKKLLYI YRSYKKILNIIQPAHLYMLSFTGHYSYLISIAKKKNITTHLIDEGTGTYAPLLESFSYHP TKLE----RY----LIGNNLNI-KGYIDHFDILHVPFPEYAKKIFNAKKYNRFFAWRKGD VLQGD------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------- >C5ZW53_9HELI (C5ZW53) -MLEVARKKLSGLMQDIKEYFVSSEYEMMFYK------KELNQCNNVFYISNLGQLKQVE TLIEFEELSNNCLVIGYTRANLEMPDFILDKADKRKFQNIILVELVVSVNYLKPGRIKQI CRIYKKLSQNIETKELYLLSVEGHYGIFAHYMKQKGVLINLLEEGTATYKFELKNGKIHV NAPAVRMGRYTEIFCTLSGIKN-MLLVGEFNKIYAAFPEKLRGIFKANEIILFFAHIN-I KPSANLVEIIEKYKITGDDIIFVSQRFDIDLNIFIEKILDILEAYVVAYRQRVFVKHHPK ESEKQI--SLFRSKIIARGFSQNIISVSDKAFLVENILDIVETKILVGLTSTSLIYAQKL NKDIVVHSVVPWFLKKVFFLEKQKKQMLSSHFNELQKTFDGFKIIEDAGAIVAGDICSDT PKNSDATALIDKANQGFVEKKILQAIFYYKQSESKDIFLRMPHILYNMLYCWDALENDFQ KYRIII---KYLQLDVVLEKKEEEFVFAKLMQ---FVDMCLREGKFEKFEKIEQLALAKQ EKFLYFDVGVIRLKKMLYLERWDDVLRAFEDLRESSKKRYFIVFEIVRSFIREENMEFEE ELKEIDDRVVGESLKLLYLYSCKKYSDIYDYIVEIKDANPYLYQQYHNKIIIQKKYSTLI ESFNVDNILEYMINNEKKQFFAEVSDVLSKYNVEYRIGDIIEALNGDQIKLKTQDMEDLI CALKGFEGLAEFCKREDDMGLICRILTFEFAGNLLENERS >C9X1J6_NEIM8 (C9X1J6) -MLQKIR----KALFHPKKFFQDSQWFATPLF------SSFAPKSNLFIISTFAQLNQAH SLTKMQKLKNNLLVILYTTQNMKMPKLIQKSVDKELFSVTYMFELPRKPGIVSPKKFLYI QRGYKKLLKTIQPAHLYVMSFAGHYSSLLSLAKKMNITTHLVEEGTATYAPLLESFTYKP TKFE----QR----FVGNNLHQ-KGYFDKFDILHVAFPEYAKKIFNANEYHRFFAHSGGI STSQSIAKIQDKYRISQNDYIFVSQRYPVSDEVYYKTIVETLNQMSLRIEGKIFIKLHPK EMENKNIMSLFLNM---VTINPRLVVINEPPFLIDPLIYLTTPKGIIGLTSTSIVYTPLL SPTTQCLSIGQIVIDSIHHTAQQENTALIEEHLEIVKQFDFIKILSSIEDGIDTNSF--- KTEETLEMLLKSAEYAYKNKNFYQAIFYWQLASNNDLSVL----GYKSLWHYNALNKVKQ NYKMKYLEINYIERISLYFNDKDKMIWQNIKNDFFKYSLCNQ------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------- >C1HI22_9ESCH (C1HI22) MIFDASLKKLRKLFVNPIGFFRDSWFFNSKNKAEELLSPLKIKSKNIFIISNLGQLKKAE SFVQKFSKRSNYLIVLATEKNTEMPKIIVEQINNKLFSSYKVLFIPTFPNVFSLKKVIWF YNVYNYLVLNSKAKDAYFMSYAQHYAIFVYLFKKNNIRCSLIEEGTGTYKTEKENPVVNI NFYS-------EII---NSIILFHYPDLKFENVYGTYPILLKKKFNAQKFVEFKGAP-SV KSSTRIDNVIHKYSITRDDIIYANQKYLIEHTLFADSLISILLRIDKPDNARIFIKPHPK EPKKNINA---IQKAIKKAKCRDIILITEPDFLIEPVIKKAKIKHLIGLTSSSLVYAPLV SKRCQSYSIAPLMIKLCDNDKSQKGINTLRLHFDILKNFDNVKILSDDITS---PSLHDK ------RIFLGE------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------- >Q51281_NEIME (Q51281) -MLKKIK----KALFQPKKFFQDSMWLTTSPF------YLTPPRNNLFVISNLGQLNQVQ SLIKIQKLTNNLLVILYTSKNLKMPKLVHQSANKNLFESIYLFELPRSPNNITPKKLLYI YRSYKKILNIIQPAHLYMLSFTGHYSYLISIAKKKNITTHLIDEGTGTYAPLLESFSYHP TKLE----RY----LIGNNLNI-KGYIDHFDILHVPFPEYAKKIFNAKKYNRFFAHAGGI SINNNIANLQKKYQISKNDYIFVSQRYPISDDLYYKSIVEILNSISLQIKGKIFIKLHPK EMGNNYVMSLFLNM---VEINPRLVVINEPPFLIEPLIYLTNPKGIIGLASSSLIYTPLL SPSTQCLSIGELIINLIQKYSMVENTEMIQEHLEIIKKFNFINILNDLNGVISNPLF--- KTEETFETLLKSAEFAYKSKNYFQAIFYWQLASKNNITLL----GHKALWYYNALYNVKQ IYKMEYSDIFYIDNISVDFHSKDKLTWEKIKHYYYSADNRIGRDR--------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------- >Q6VNM8_NEIME (Q6VNM8) ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -YKMKYLEINYIERISLYFNDKDKMIWQNIKNDFFKYSLCNQ------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------------------------