Mercurial > repos > chrisw > monorail_test

changeset 9:05932011f686 draft

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Uploaded
author chrisw
date Wed, 13 Feb 2019 15:32:57 -0500
parents 0de07638de49
children f43dd6f7c687
files monorail.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/monorail.xml	Wed Feb 13 15:29:49 2019 -0500
+++ b/monorail.xml	Wed Feb 13 15:32:57 2019 -0500
@@ -8,7 +8,7 @@
     </requirements>
         <!-- /bin/bash -x monorail.slim.sh ../ath10 4 10 ../ath10/gtf/exons.bed ./tmp2 ../fastqs/SRR8505407_1_100.fastq.gz ../fastqs/SRR8505407_2_100.fastq.gz -->
         <command detect_errors="aggressive"><![CDATA[
-            snakemake --snakefile "$__tool_directory__/Snakefile
+            snakemake --snakefile "$__tool_directory__/Snakefile"
             -j \${GALAXY_SLOTS:-4} 
             --config 
                     #if str($singlePaired.sPaired) == "paired_collection"